BLASTX nr result

ID: Cimicifuga21_contig00020921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020921
         (1116 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265166.1| PREDICTED: 2-oxoisovalerate dehydrogenase su...   379   e-103
ref|XP_002268860.1| PREDICTED: 2-oxoisovalerate dehydrogenase su...   374   e-101
ref|XP_002873392.1| hypothetical protein ARALYDRAFT_350155 [Arab...   367   3e-99
gb|EEC68967.1| hypothetical protein OsI_37710 [Oryza sativa Indi...   365   8e-99
gb|AFW56347.1| hypothetical protein ZEAMMB73_816012 [Zea mays]        365   1e-98

>ref|XP_002265166.1| PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha,
            mitochondrial [Vitis vinifera]
            gi|296088533|emb|CBI37524.3| unnamed protein product
            [Vitis vinifera]
          Length = 481

 Score =  379 bits (974), Expect = e-103
 Identities = 191/251 (76%), Positives = 215/251 (85%), Gaps = 3/251 (1%)
 Frame = +3

Query: 372  RIPNSLLLNSAPIFSCRRFESVRAETQEDQEDDI---QALDFPGGRVTFTSHLRFIAESP 542
            R P+++L+N+A  F+ RRFES +AE   D   D    Q LDFPGG+V FTS +RFI ESP
Sbjct: 50   RNPDAVLVNAATQFATRRFESTKAEKHVDSLCDAEGNQLLDFPGGKVAFTSEMRFIPESP 109

Query: 543  QKRIDCYRVLDDAGQTIMGSKYQQVSKEVAVKIYSHMVTLQIMDTIFYEAQRQGRISFYV 722
             +R  CYRVLDD GQ  M S + QVSKEVAVK+Y+ M+TLQ+MDTIFYEAQRQGRISFYV
Sbjct: 110  MERAHCYRVLDDNGQPNM-SNFVQVSKEVAVKMYATMLTLQVMDTIFYEAQRQGRISFYV 168

Query: 723  TTIGEEAINIASAAALTMDDIIFPQYREPGVLLWRGFTLQEFANQCFGNKSDYGKGRQMP 902
            T+IGEEAIN+ASAAAL++DD+IFPQYREPGVLLWRGFTLQEFANQCFGNK+DYGKGRQMP
Sbjct: 169  TSIGEEAINVASAAALSIDDVIFPQYREPGVLLWRGFTLQEFANQCFGNKADYGKGRQMP 228

Query: 903  IHYGSNKLNYFTVSSTIATQIPQAVGAAYSLKMDNKSACAVTFFGDGGTSEGDFHAALNF 1082
            IHYGSNK NY TVSST+ATQIPQAVGAAYSLKMD K AC VT+FGDGG+S GDFHAALNF
Sbjct: 229  IHYGSNKHNYVTVSSTVATQIPQAVGAAYSLKMDGKDACTVTYFGDGGSSTGDFHAALNF 288

Query: 1083 AAVTEAPVIFI 1115
            AAV EAPVIFI
Sbjct: 289  AAVMEAPVIFI 299


>ref|XP_002268860.1| PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha,
            mitochondrial [Vitis vinifera]
            gi|302142724|emb|CBI19927.3| unnamed protein product
            [Vitis vinifera]
          Length = 471

 Score =  374 bits (960), Expect = e-101
 Identities = 194/299 (64%), Positives = 226/299 (75%), Gaps = 8/299 (2%)
 Frame = +3

Query: 243  MAIWFTRSGNITHYXXXXXXXXXXXXQSNHLNSSPSPSFSENGRIPNSLLLNSAPIFSCR 422
            MA WFTRSGNI H+              + L  +P+ S S   R P + L NS  +    
Sbjct: 1    MAAWFTRSGNIAHHVKRN--------MGSFLRPAPTLSDSSWSRSP-ACLGNSPALLWAG 51

Query: 423  RFESVRAETQEDQE--------DDIQALDFPGGRVTFTSHLRFIAESPQKRIDCYRVLDD 578
            R ES RA+   D +        DD QA+DFPGGRV  TS ++FI   PQ+R+ CY ++++
Sbjct: 52   RLESTRAQKLVDSDSENDAPLRDDDQAIDFPGGRVMLTSEMQFIPGYPQQRVHCYHLMNN 111

Query: 579  AGQTIMGSKYQQVSKEVAVKIYSHMVTLQIMDTIFYEAQRQGRISFYVTTIGEEAINIAS 758
             GQT M S ++QVSKEVAVK+YS M+TLQIMDTIFYEAQRQGRISFY+T++GEEAINIAS
Sbjct: 112  DGQTNMCSSFEQVSKEVAVKMYSDMITLQIMDTIFYEAQRQGRISFYLTSVGEEAINIAS 171

Query: 759  AAALTMDDIIFPQYREPGVLLWRGFTLQEFANQCFGNKSDYGKGRQMPIHYGSNKLNYFT 938
            AAAL+ DDI+  QYREPGVLLWRGFTLQEFANQCFGNK+D GKGRQMPIHYGS KLNYFT
Sbjct: 172  AAALSPDDIVMAQYREPGVLLWRGFTLQEFANQCFGNKADCGKGRQMPIHYGSKKLNYFT 231

Query: 939  VSSTIATQIPQAVGAAYSLKMDNKSACAVTFFGDGGTSEGDFHAALNFAAVTEAPVIFI 1115
            VSS +ATQ+PQAVGAAYSLKMDNK AC V +FGDG TSEGDFHA+LNFAAV EAPVIF+
Sbjct: 232  VSSPLATQLPQAVGAAYSLKMDNKDACVVAYFGDGSTSEGDFHASLNFAAVMEAPVIFL 290


>ref|XP_002873392.1| hypothetical protein ARALYDRAFT_350155 [Arabidopsis lyrata subsp.
            lyrata] gi|297319229|gb|EFH49651.1| hypothetical protein
            ARALYDRAFT_350155 [Arabidopsis lyrata subsp. lyrata]
          Length = 472

 Score =  367 bits (942), Expect = 3e-99
 Identities = 179/229 (78%), Positives = 199/229 (86%)
 Frame = +3

Query: 429  ESVRAETQEDQEDDIQALDFPGGRVTFTSHLRFIAESPQKRIDCYRVLDDAGQTIMGSKY 608
            E++ +  Q +   + Q +DFPGG+V FT  +RFI+ES  +R+ CYRVLDD GQ I  S++
Sbjct: 63   ETLSSFGQHEDARNHQVMDFPGGKVAFTPEIRFISESDSERVPCYRVLDDNGQLITNSQF 122

Query: 609  QQVSKEVAVKIYSHMVTLQIMDTIFYEAQRQGRISFYVTTIGEEAINIASAAALTMDDII 788
             QVS+EVAVKIYS MVTLQIMD IFYEAQRQGR+SFY T IGEEAINIASAAALT  D+I
Sbjct: 123  VQVSEEVAVKIYSDMVTLQIMDNIFYEAQRQGRLSFYATAIGEEAINIASAAALTPQDVI 182

Query: 789  FPQYREPGVLLWRGFTLQEFANQCFGNKSDYGKGRQMPIHYGSNKLNYFTVSSTIATQIP 968
            FPQYREPGVLLWRGFTLQEFANQCFGNKSDYGKGRQMP+HYGSNKLNYFTVS+TIATQ+P
Sbjct: 183  FPQYREPGVLLWRGFTLQEFANQCFGNKSDYGKGRQMPVHYGSNKLNYFTVSATIATQLP 242

Query: 969  QAVGAAYSLKMDNKSACAVTFFGDGGTSEGDFHAALNFAAVTEAPVIFI 1115
             AVGAAYSLKMD K ACAVT+FGDGGTSEGDFHAALNFAAV EAPVIFI
Sbjct: 243  NAVGAAYSLKMDRKDACAVTYFGDGGTSEGDFHAALNFAAVMEAPVIFI 291


>gb|EEC68967.1| hypothetical protein OsI_37710 [Oryza sativa Indica Group]
          Length = 479

 Score =  365 bits (938), Expect = 8e-99
 Identities = 181/241 (75%), Positives = 209/241 (86%), Gaps = 8/241 (3%)
 Frame = +3

Query: 414  SCRRF--ESVRAETQEDQED------DIQALDFPGGRVTFTSHLRFIAESPQKRIDCYRV 569
            S RRF  ES  A   E+ E+      D QA+DFPGG+V+F + + F+ ES ++RI+CYRV
Sbjct: 57   SVRRFTGESNAAAAVEEAENGLVAGGDQQAIDFPGGKVSFVAEMNFLPESQRERINCYRV 116

Query: 570  LDDAGQTIMGSKYQQVSKEVAVKIYSHMVTLQIMDTIFYEAQRQGRISFYVTTIGEEAIN 749
            LDD G+TI GS++Q+VSKE+A+K+YS MVTLQ+MDTIF+EAQRQGRISFY+T+ GEEAIN
Sbjct: 117  LDDDGRTISGSRFQEVSKELALKMYSEMVTLQVMDTIFFEAQRQGRISFYLTSHGEEAIN 176

Query: 750  IASAAALTMDDIIFPQYREPGVLLWRGFTLQEFANQCFGNKSDYGKGRQMPIHYGSNKLN 929
            IASAAALT+DDI+ PQYREPGVLLWRGFTLQEFANQCFGNK DYGKGRQMPIHYGSN+LN
Sbjct: 177  IASAAALTIDDIVLPQYREPGVLLWRGFTLQEFANQCFGNKLDYGKGRQMPIHYGSNRLN 236

Query: 930  YFTVSSTIATQIPQAVGAAYSLKMDNKSACAVTFFGDGGTSEGDFHAALNFAAVTEAPVI 1109
            YFTVSS IATQ+P AVGAAYSLKMD K ACA+T+FGDGGTSEGDFHAALNFAAV EAPVI
Sbjct: 237  YFTVSSPIATQLPHAVGAAYSLKMDKKDACAITYFGDGGTSEGDFHAALNFAAVMEAPVI 296

Query: 1110 F 1112
            F
Sbjct: 297  F 297


>gb|AFW56347.1| hypothetical protein ZEAMMB73_816012 [Zea mays]
          Length = 346

 Score =  365 bits (936), Expect = 1e-98
 Identities = 189/281 (67%), Positives = 222/281 (79%), Gaps = 18/281 (6%)
 Frame = +3

Query: 324  SNHLNSSPSPSFSENGRIPNSLLLNSAPIFSCRRFESVR-------------AETQEDQE 464
            + H +  P+ S+   G +P + L + A   S R F SVR             A   E+ E
Sbjct: 27   ARHGSGQPTSSWFL-GSVPQAALGSPALDTSRRGFCSVRRFAGESSAAAAAAAVVDEEPE 85

Query: 465  D-----DIQALDFPGGRVTFTSHLRFIAESPQKRIDCYRVLDDAGQTIMGSKYQQVSKEV 629
                  D QA+DFPGG+V+F + + F+ ES ++RI+CYRVLDD G+TI GS++Q+VS+E+
Sbjct: 86   SGFAAGDQQAVDFPGGKVSFVAEMNFLPESTRERINCYRVLDDDGRTISGSRFQEVSREL 145

Query: 630  AVKIYSHMVTLQIMDTIFYEAQRQGRISFYVTTIGEEAINIASAAALTMDDIIFPQYREP 809
            A+K+YS MVTLQIMDTIFYEAQRQGRISFY+T+ GEEAINIASAAAL+MDDI+ PQYREP
Sbjct: 146  ALKMYSEMVTLQIMDTIFYEAQRQGRISFYLTSNGEEAINIASAAALSMDDIVLPQYREP 205

Query: 810  GVLLWRGFTLQEFANQCFGNKSDYGKGRQMPIHYGSNKLNYFTVSSTIATQIPQAVGAAY 989
            GVLLWRGFTLQEFANQCFGNK DYGKGRQMPIHYGSN+LNYFTVSS IATQ+P AVGAAY
Sbjct: 206  GVLLWRGFTLQEFANQCFGNKLDYGKGRQMPIHYGSNRLNYFTVSSPIATQLPHAVGAAY 265

Query: 990  SLKMDNKSACAVTFFGDGGTSEGDFHAALNFAAVTEAPVIF 1112
            SLKMD K ACA+T+FGDGGTSEGDFHAALNFAAV EAPVIF
Sbjct: 266  SLKMDKKDACAITYFGDGGTSEGDFHAALNFAAVMEAPVIF 306


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