BLASTX nr result

ID: Cimicifuga21_contig00020906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020906
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]          88   8e-16
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]    85   5e-15
emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]    85   7e-15
gb|AAR96002.1| retrotransposon-like protein [Musa acuminata]           83   2e-14
emb|CAN70420.1| hypothetical protein VITISV_033745 [Vitis vinifera]    83   3e-14

>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 39/66 (59%), Positives = 52/66 (78%)
 Frame = +1

Query: 1   FVHIPKDERTKLDDKARQCIFVGYADEKWGYKLIDPTTMKVHRSRDVVFFEDQTIQDFVK 180
           FVH+P+DER+KLD K RQCIF+GY  +++GY+L DP   K+ RSRDVVFFE+QTI+D  K
Sbjct: 651 FVHVPRDERSKLDSKTRQCIFIGYGFDEFGYRLYDPVEKKLVRSRDVVFFENQTIEDIDK 710

Query: 181 GQDLEA 198
            +  E+
Sbjct: 711 VKQPES 716


>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
          Length = 1207

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 38/66 (57%), Positives = 47/66 (71%)
 Frame = +1

Query: 1   FVHIPKDERTKLDDKARQCIFVGYADEKWGYKLIDPTTMKVHRSRDVVFFEDQTIQDFVK 180
           FVHIPKDER+KLD K R C+F+GY  ++ GY+  DP   K+ RSRDVVF ED TIQD  K
Sbjct: 536 FVHIPKDERSKLDAKTRPCVFIGYGQDELGYRFYDPVQKKLVRSRDVVFMEDHTIQDIEK 595

Query: 181 GQDLEA 198
              +E+
Sbjct: 596 TNPMES 601


>emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]
          Length = 1317

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 38/66 (57%), Positives = 47/66 (71%)
 Frame = +1

Query: 1   FVHIPKDERTKLDDKARQCIFVGYADEKWGYKLIDPTTMKVHRSRDVVFFEDQTIQDFVK 180
           FVHIPKDER+KLD K R C+F+GY  ++ GY+  DP   K+ RSRDVVF ED TIQD  K
Sbjct: 604 FVHIPKDERSKLDVKTRPCVFIGYGQDELGYRFYDPVQKKLVRSRDVVFMEDHTIQDIEK 663

Query: 181 GQDLEA 198
              +E+
Sbjct: 664 TNPMES 669


>gb|AAR96002.1| retrotransposon-like protein [Musa acuminata]
          Length = 521

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 37/57 (64%), Positives = 45/57 (78%)
 Frame = +1

Query: 1   FVHIPKDERTKLDDKARQCIFVGYADEKWGYKLIDPTTMKVHRSRDVVFFEDQTIQD 171
           FVHIPKDER+KLD+KA+ CIF+GY  E++GY+L DP   K+ RSRDVVF EDQ   D
Sbjct: 382 FVHIPKDERSKLDNKAKACIFLGYGHEEFGYRLWDPVNKKIIRSRDVVFLEDQLFDD 438


>emb|CAN70420.1| hypothetical protein VITISV_033745 [Vitis vinifera]
          Length = 151

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/67 (58%), Positives = 55/67 (82%)
 Frame = +1

Query: 1   FVHIPKDERTKLDDKARQCIFVGYADEKWGYKLIDPTTMKVHRSRDVVFFEDQTIQDFVK 180
           FV++P+DER+KLD K +QCIF+GY++E++GYKL D TT K+  SRDVVFFEDQTI+D  +
Sbjct: 83  FVYVPRDERSKLDSKTKQCIFLGYSNEEFGYKLWDLTTKKI-ISRDVVFFEDQTIEDLDQ 141

Query: 181 GQDLEAY 201
            + L+ +
Sbjct: 142 VKKLKHF 148


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