BLASTX nr result

ID: Cimicifuga21_contig00020863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020863
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510416.1| ornithine carbamoyltransferase, putative [Ri...   148   4e-34
ref|XP_002281919.1| PREDICTED: ornithine carbamoyltransferase, c...   147   9e-34
gb|ABK93198.1| unknown [Populus trichocarpa]                          144   1e-32
ref|XP_002307666.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-29
gb|ADN34186.1| ornithine carbamoyltransferase [Cucumis melo subs...   128   4e-28

>ref|XP_002510416.1| ornithine carbamoyltransferase, putative [Ricinus communis]
           gi|223551117|gb|EEF52603.1| ornithine
           carbamoyltransferase, putative [Ricinus communis]
          Length = 378

 Score =  148 bits (374), Expect = 4e-34
 Identities = 75/88 (85%), Positives = 81/88 (92%)
 Frame = -2

Query: 265 RISCQTSASAAPISSLVNGKAKAGLKDFIHISDFNKDTIMKILDRAAEVKALLKSGDRTF 86
           RISCQTS++ +  SS VNGKAK  LKDF+HISDF+K TIMKILDRAAEVKALLKSGDR+F
Sbjct: 51  RISCQTSSATSSPSSSVNGKAKTELKDFVHISDFDKATIMKILDRAAEVKALLKSGDRSF 110

Query: 85  LPFKGKTMAMIFAKPSMRTRVSFETGFF 2
           LPFKGKTMAMIFAKPSMRTRVSFETGFF
Sbjct: 111 LPFKGKTMAMIFAKPSMRTRVSFETGFF 138


>ref|XP_002281919.1| PREDICTED: ornithine carbamoyltransferase, chloroplastic [Vitis
           vinifera] gi|302142520|emb|CBI19723.3| unnamed protein
           product [Vitis vinifera]
          Length = 378

 Score =  147 bits (371), Expect = 9e-34
 Identities = 85/139 (61%), Positives = 100/139 (71%), Gaps = 7/139 (5%)
 Frame = -2

Query: 397 MAAISCSYSVRXXXXXXXXXXXXXSGQTIQYSLHFP-VKLSNSG------HRISCQTSAS 239
           MAAI+   ++R             SGQ  +    FP + LS+S        RISCQTS++
Sbjct: 1   MAAITSHCALRSDCAPFSSSSSSFSGQAFRQPAPFPGISLSSSAISPTLRRRISCQTSSA 60

Query: 238 AAPISSLVNGKAKAGLKDFIHISDFNKDTIMKILDRAAEVKALLKSGDRTFLPFKGKTMA 59
            +P SS VN K K+GLKDF+HI+DF+K TI+KILDRA EVKALLKSG+RTFLPFKGKTMA
Sbjct: 61  ISP-SSAVNVKEKSGLKDFLHINDFDKTTILKILDRALEVKALLKSGERTFLPFKGKTMA 119

Query: 58  MIFAKPSMRTRVSFETGFF 2
           MIFAKPSMRTRVSFETGFF
Sbjct: 120 MIFAKPSMRTRVSFETGFF 138


>gb|ABK93198.1| unknown [Populus trichocarpa]
          Length = 378

 Score =  144 bits (362), Expect = 1e-32
 Identities = 74/91 (81%), Positives = 82/91 (90%), Gaps = 3/91 (3%)
 Frame = -2

Query: 265 RISCQTSASAA---PISSLVNGKAKAGLKDFIHISDFNKDTIMKILDRAAEVKALLKSGD 95
           RISCQ S+S+A   P  S VNG AKAG++DF+HISDF+K TIMKILDRAAEVKA++KSGD
Sbjct: 48  RISCQISSSSATSPPPPSSVNGPAKAGMEDFLHISDFDKATIMKILDRAAEVKAVIKSGD 107

Query: 94  RTFLPFKGKTMAMIFAKPSMRTRVSFETGFF 2
           RTFLPFKGKTMAMIFAKPSMRTRVSFETGFF
Sbjct: 108 RTFLPFKGKTMAMIFAKPSMRTRVSFETGFF 138


>ref|XP_002307666.1| predicted protein [Populus trichocarpa] gi|222857115|gb|EEE94662.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score =  132 bits (333), Expect = 2e-29
 Identities = 71/91 (78%), Positives = 79/91 (86%), Gaps = 3/91 (3%)
 Frame = -2

Query: 265 RISCQTSASAA---PISSLVNGKAKAGLKDFIHISDFNKDTIMKILDRAAEVKALLKSGD 95
           RISCQ S+S+A   P  S VN    AG++DF+HISDF+K TIMKILDRAAEVKA++KSGD
Sbjct: 48  RISCQISSSSATSPPPPSSVN----AGMEDFLHISDFDKATIMKILDRAAEVKAVIKSGD 103

Query: 94  RTFLPFKGKTMAMIFAKPSMRTRVSFETGFF 2
           RTFLPFKGKTMAMIFAKPSMRTRVSFETGFF
Sbjct: 104 RTFLPFKGKTMAMIFAKPSMRTRVSFETGFF 134


>gb|ADN34186.1| ornithine carbamoyltransferase [Cucumis melo subsp. melo]
          Length = 378

 Score =  128 bits (322), Expect = 4e-28
 Identities = 73/135 (54%), Positives = 88/135 (65%)
 Frame = -2

Query: 406 HTTMAAISCSYSVRXXXXXXXXXXXXXSGQTIQYSLHFPVKLSNSGHRISCQTSASAAPI 227
           H+T+ +   S S                G    ++L  P +       ISCQTSA++ P 
Sbjct: 7   HSTIPSHKHSLSTHFYSTKSLPRSVKFFGDVSGFALPTPSRFPLRFPSISCQTSATSPP- 65

Query: 226 SSLVNGKAKAGLKDFIHISDFNKDTIMKILDRAAEVKALLKSGDRTFLPFKGKTMAMIFA 47
            SL + K K   KDF+H+SDF+K T++KILDRA EVKA LKSGDR+FLPFKGKTMAMIFA
Sbjct: 66  -SLAS-KVKTEKKDFLHLSDFDKSTLLKILDRAVEVKAQLKSGDRSFLPFKGKTMAMIFA 123

Query: 46  KPSMRTRVSFETGFF 2
           KPSMRTRVSFETGFF
Sbjct: 124 KPSMRTRVSFETGFF 138


Top