BLASTX nr result

ID: Cimicifuga21_contig00020846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020846
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indi...    88   8e-17
gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japo...    84   1e-14
gb|EEC66671.1| hypothetical protein OsI_32959 [Oryza sativa Indi...    84   1e-14
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    84   2e-14
gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japo...    78   2e-14

>gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indica Group]
           gi|222630794|gb|EEE62926.1| hypothetical protein
           OsJ_17731 [Oryza sativa Japonica Group]
          Length = 893

 Score = 88.2 bits (217), Expect(2) = 8e-17
 Identities = 45/116 (38%), Positives = 67/116 (57%)
 Frame = +2

Query: 2   NYQKSRIYFSKNMYTRHQKIGKRIFKITRSITSDKYLGAPLLLSRKDTDNFQEITSRVLN 181
           N  KS I FSKN     +K+   I  I+    ++KYLG P+ + R     F  +  RV  
Sbjct: 390 NKDKSSIMFSKNTSQADRKMVMEILDISTEARNEKYLGLPVYMGRSRAKTFAYLKERVWK 449

Query: 182 KMEGWRAKFLSRAGKVTLIKAVTSAIPSNFMSIFKVSTTICDKVDSMNVNFF*GKQ 349
           K++GW+ K LS+AGK  LIKAV  AIP+  MS F ++ T+CD++ ++   +F  +Q
Sbjct: 450 KIQGWKEKLLSKAGKDILIKAVAQAIPTFAMSCFDLTKTLCDEISAIICRYFWSQQ 505



 Score = 23.5 bits (49), Expect(2) = 8e-17
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 336 SEGNNTNKIPLISWAKICQPRTLGGL 413
           S+    NK+  +SW  +C+ +  GGL
Sbjct: 503 SQQETENKMHWLSWDLLCRRKKKGGL 528


>gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japonica Group]
          Length = 697

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 41/112 (36%), Positives = 65/112 (58%)
 Frame = +2

Query: 2   NYQKSRIYFSKNMYTRHQKIGKRIFKITRSITSDKYLGAPLLLSRKDTDNFQEITSRVLN 181
           N  KS + FS NM    +K+      I     +D+YLG P+ + R     F+ +  ++  
Sbjct: 236 NRDKSVVMFSSNMDEEEKKVFSHTLGINCIAHNDRYLGLPVFIGRSKAKTFEYLKEKIWR 295

Query: 182 KMEGWRAKFLSRAGKVTLIKAVTSAIPSNFMSIFKVSTTICDKVDSMNVNFF 337
            ++GW+ KFLS+AGK  LIKAV  AIP+  MS F ++ ++CD++ SM + F+
Sbjct: 296 CIQGWKEKFLSKAGKEILIKAVAQAIPTYAMSCFYLTKSLCDELTSMILRFW 347


>gb|EEC66671.1| hypothetical protein OsI_32959 [Oryza sativa Indica Group]
          Length = 697

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 41/112 (36%), Positives = 65/112 (58%)
 Frame = +2

Query: 2   NYQKSRIYFSKNMYTRHQKIGKRIFKITRSITSDKYLGAPLLLSRKDTDNFQEITSRVLN 181
           N  KS + FS NM    +K+      I     +D+YLG P+ + R     F+ +  ++  
Sbjct: 236 NRDKSVVMFSSNMDEEEKKVFSHTLGINCIAHNDRYLGLPVFIGRSKAKTFEYLKEKIWR 295

Query: 182 KMEGWRAKFLSRAGKVTLIKAVTSAIPSNFMSIFKVSTTICDKVDSMNVNFF 337
            ++GW+ KFLS+AGK  LIKAV  AIP+  MS F ++ ++CD++ SM + F+
Sbjct: 296 CIQGWKEKFLSKAGKEILIKAVAQAIPTYAMSCFYLTKSLCDELTSMILRFW 347


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
 Frame = +2

Query: 2    NYQKSRIYFSKNMYTRHQKIGKRIFKITRSITSDKYLGAPLLLSRKDTDNFQEITSRVLN 181
            N  KS + FS N  +  ++       + R  T+++YLG P+ + R  T  F  +  R+  
Sbjct: 971  NKDKSAVMFSPNTSSLEKRAVMAALNMQRETTNERYLGLPVFVGRSRTKIFSYLKERIWQ 1030

Query: 182  KMEGWRAKFLSRAGKVTLIKAVTSAIPSNFMSIFKVSTTICDKVDSMNVNFF*GKQH**N 361
            +++GW+ K LSRAGK  LIKAV  AIP+  M  F+++  +CD++  M   ++   Q   N
Sbjct: 1031 RIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDN 1090

Query: 362  TPYQLG*NMST--SNLGRL 412
              + L  N  T   N+G L
Sbjct: 1091 KMHWLSWNKLTLPKNMGGL 1109


>gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japonica Group]
          Length = 615

 Score = 78.2 bits (191), Expect(2) = 2e-14
 Identities = 40/116 (34%), Positives = 66/116 (56%)
 Frame = +2

Query: 2   NYQKSRIYFSKNMYTRHQKIGKRIFKITRSITSDKYLGAPLLLSRKDTDNFQEITSRVLN 181
           N  KS I FSKN  T  ++       I     ++KYLG P+ + R  +  F  +  RV  
Sbjct: 171 NKDKSTIMFSKNSTTVEKENVMAGLGIQSEARNEKYLGLPIYMGRSRSQTFSYLKDRVWK 230

Query: 182 KMEGWRAKFLSRAGKVTLIKAVTSAIPSNFMSIFKVSTTICDKVDSMNVNFF*GKQ 349
           +++GW+ + LS+AGK  LIK+V  +IP+  MS F ++ T+C+++ S+   F+  +Q
Sbjct: 231 RLQGWKERLLSKAGKEILIKSVVQSIPTYAMSCFDLTKTLCNELGSLVCRFWWAQQ 286



 Score = 25.4 bits (54), Expect(2) = 2e-14
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +3

Query: 336 SEGNNTNKIPLISWAKICQPRTLGGL 413
           ++  N NK+  +SW  +C+ +  GG+
Sbjct: 284 AQQENENKVHWVSWELLCRRKEQGGI 309


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