BLASTX nr result

ID: Cimicifuga21_contig00020845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020845
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277247.1| PREDICTED: RPM1-interacting protein 4 [Vitis...    97   2e-18
ref|XP_002526945.1| NOI, putative [Ricinus communis] gi|22353369...    85   1e-14
ref|XP_003525623.1| PREDICTED: uncharacterized protein LOC100526...    83   3e-14
gb|ACU15988.1| unknown [Glycine max]                                   82   9e-14
ref|XP_003550860.1| PREDICTED: RPM1-interacting protein 4-like [...    81   1e-13

>ref|XP_002277247.1| PREDICTED: RPM1-interacting protein 4 [Vitis vinifera]
           gi|297733635|emb|CBI14882.3| unnamed protein product
           [Vitis vinifera]
          Length = 74

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 47/75 (62%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
 Frame = -3

Query: 432 MTSQDSGQSLPKFGEWDVNNPASID-FSVMFNKARDEKKAIVKTGDGVSPIKNDNAYQQK 256
           M SQD G+ LPKFGEWDVNNPAS + F+V+FNKARDEKK     G+  SP +N N Y+Q 
Sbjct: 1   MASQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTNA-AGNVASPRRNGNGYKQN 59

Query: 255 ENSRYRVKRKWFCCG 211
           E+  Y  KRKWFCCG
Sbjct: 60  EDYHYSPKRKWFCCG 74


>ref|XP_002526945.1| NOI, putative [Ricinus communis] gi|223533697|gb|EEF35432.1| NOI,
           putative [Ricinus communis]
          Length = 75

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 38/74 (51%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
 Frame = -3

Query: 432 MTSQDSGQSLPKFGEWDVNNPASID-FSVMFNKARDEKKAIVKTGDGVSPIKNDNAYQQK 256
           M++QD G+ LPKFGEWDVNNPAS + F+V+F+KARDEKK+    G G +  +N+N ++  
Sbjct: 1   MSTQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNAAGGAGAASQRNNNLHKPD 60

Query: 255 ENSRYRVKRKWFCC 214
           +N +    +KWFCC
Sbjct: 61  DNYQDPTAKKWFCC 74


>ref|XP_003525623.1| PREDICTED: uncharacterized protein LOC100526954 [Glycine max]
          Length = 72

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 43/76 (56%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
 Frame = -3

Query: 432 MTSQDSGQSLPKFGEWDVNNPASID-FSVMFNKARDEKKAIVKTGDGVSPI-KNDNAYQQ 259
           M SQ++G+ LPKFGEWDVNNPAS + F+V+FNKARDEKK    T     P+ KN+N    
Sbjct: 1   MASQENGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTNTATPRRSDPVFKNEN---- 56

Query: 258 KENSRYRVKRKWFCCG 211
               +Y  KRKWFCCG
Sbjct: 57  YNTPQYSGKRKWFCCG 72


>gb|ACU15988.1| unknown [Glycine max]
          Length = 72

 Score = 81.6 bits (200), Expect = 9e-14
 Identities = 42/76 (55%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
 Frame = -3

Query: 432 MTSQDSGQSLPKFGEWDVNNPASID-FSVMFNKARDEKKAIVKTGDGVSPI-KNDNAYQQ 259
           M SQ++G+ LPKFGEWDVNNPAS + F+V+FNKARDE+K    T     P+ KN+N    
Sbjct: 1   MASQENGRPLPKFGEWDVNNPASAEGFTVIFNKARDEEKTNTATPRRSDPVFKNEN---- 56

Query: 258 KENSRYRVKRKWFCCG 211
               +Y  KRKWFCCG
Sbjct: 57  YNTPQYSGKRKWFCCG 72


>ref|XP_003550860.1| PREDICTED: RPM1-interacting protein 4-like [Glycine max]
          Length = 75

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
 Frame = -3

Query: 423 QDSGQSLPKFGEWDVNNPASID-FSVMFNKARDEKKAIVKTGDGVSPIKNDNAYQQK--E 253
           Q++G+ LPKFGEWDVNNPAS + F+V+FNKARDEKK    T    +P ++D  ++ +   
Sbjct: 3   QENGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTNTATAT-PTPRRSDPVFKNENYN 61

Query: 252 NSRYRVKRKWFCCG 211
           N +Y  KRKWFCCG
Sbjct: 62  NPQYSGKRKWFCCG 75


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