BLASTX nr result

ID: Cimicifuga21_contig00020826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020826
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510296.1| hypothetical protein RCOM_1592640 [Ricinus c...    74   1e-11
ref|XP_002327097.1| predicted protein [Populus trichocarpa] gi|2...    61   2e-07
emb|CBI19594.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002282153.1| PREDICTED: probable transcription factor KAN...    60   2e-07

>ref|XP_002510296.1| hypothetical protein RCOM_1592640 [Ricinus communis]
           gi|223550997|gb|EEF52483.1| hypothetical protein
           RCOM_1592640 [Ricinus communis]
          Length = 347

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 44/93 (47%), Positives = 49/93 (52%)
 Frame = +2

Query: 56  RGSWSSMERNSWSPPCKENQATYGHFQPNKFSDKPTKDVYMPDLSMSHNDTDKLYLSSLA 235
           RGSWSS                Y HF  +   +       M DL MS    + L  SSL+
Sbjct: 259 RGSWSSSMETRDINISNSEALIYSHFSAHDTKENGP----MADLHMSDRVKESLDSSSLS 314

Query: 236 SSHMLPNLEFTLGRQSWQMDYVEPSKELTLLKC 334
           S+ ML NLEFTLGR SWQMDY E S ELTLLKC
Sbjct: 315 STDMLVNLEFTLGRPSWQMDYAESSNELTLLKC 347


>ref|XP_002327097.1| predicted protein [Populus trichocarpa] gi|222835412|gb|EEE73847.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/47 (61%), Positives = 36/47 (76%)
 Frame = +2

Query: 194 SHNDTDKLYLSSLASSHMLPNLEFTLGRQSWQMDYVEPSKELTLLKC 334
           +H+ + +L  SS +SS ML NLEFTLGR SWQ+DY E + ELTLLKC
Sbjct: 247 AHDHSKRLDSSSSSSSDMLLNLEFTLGRPSWQLDYAETTNELTLLKC 293


>emb|CBI19594.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 40/95 (42%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
 Frame = +2

Query: 56  RGSWS-SMERNSWSPPCKENQATYGHFQPNKFSDKPTKDVYMPDLSMSHNDTDKLYLSSL 232
           R SWS SME N       EN   Y H   N    +  K      L ++    +++  S+L
Sbjct: 197 RSSWSLSMETNDEGRLSHENGLKYSHLMANDTKMEGHKVA----LHVAEGPKERVDSSAL 252

Query: 233 ASSHMLPNLEFTLGRQSWQMDYVEPS-KELTLLKC 334
           + S ML NLEFTLGR SWQ+DY + S  EL LLKC
Sbjct: 253 SPSDMLLNLEFTLGRPSWQIDYADQSPNELALLKC 287


>ref|XP_002282153.1| PREDICTED: probable transcription factor KAN4-like [Vitis vinifera]
          Length = 338

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 40/95 (42%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
 Frame = +2

Query: 56  RGSWS-SMERNSWSPPCKENQATYGHFQPNKFSDKPTKDVYMPDLSMSHNDTDKLYLSSL 232
           R SWS SME N       EN   Y H   N    +  K      L ++    +++  S+L
Sbjct: 248 RSSWSLSMETNDEGRLSHENGLKYSHLMANDTKMEGHKVA----LHVAEGPKERVDSSAL 303

Query: 233 ASSHMLPNLEFTLGRQSWQMDYVEPS-KELTLLKC 334
           + S ML NLEFTLGR SWQ+DY + S  EL LLKC
Sbjct: 304 SPSDMLLNLEFTLGRPSWQIDYADQSPNELALLKC 338


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