BLASTX nr result

ID: Cimicifuga21_contig00020825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020825
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269061.2| PREDICTED: glutamate receptor 2.2-like [Viti...    75   4e-12
emb|CBI17829.3| unnamed protein product [Vitis vinifera]               72   5e-11
emb|CAN64921.1| hypothetical protein VITISV_017200 [Vitis vinifera]    71   8e-11
emb|CBI17828.3| unnamed protein product [Vitis vinifera]               70   1e-10
ref|XP_002462415.1| hypothetical protein SORBIDRAFT_02g025250 [S...    70   2e-10

>ref|XP_002269061.2| PREDICTED: glutamate receptor 2.2-like [Vitis vinifera]
          Length = 832

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 43/105 (40%), Positives = 57/105 (54%)
 Frame = -3

Query: 385 KLLATQTRVFIVHVSASLGPLFFPKVKEVGLMSEGNAWIITXXXXXXXXXXXXXXXXXXX 206
           KL+   TRVF+VH+S+SL   FF K KE+G+MS+G AWIIT                   
Sbjct: 141 KLMTMSTRVFVVHMSSSLASRFFLKAKELGMMSKGYAWIITDG----------------- 183

Query: 205 XGNAWIIT**LANLLGSMDCSAFDSMRGVLGLKPYIQGLESLINF 71
                     + ++L SMD S  DSM+G++GL+PYI   E L NF
Sbjct: 184 ----------ITSILNSMDPSVIDSMQGLIGLRPYIPPSEELNNF 218


>emb|CBI17829.3| unnamed protein product [Vitis vinifera]
          Length = 704

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/103 (39%), Positives = 55/103 (53%)
 Frame = -3

Query: 379 LATQTRVFIVHVSASLGPLFFPKVKEVGLMSEGNAWIITXXXXXXXXXXXXXXXXXXXXG 200
           +   TRVF+VH+S+SL   FF K KE+G+MS+G AWIIT                     
Sbjct: 1   MTMSTRVFVVHMSSSLASRFFLKAKELGMMSKGYAWIITDG------------------- 41

Query: 199 NAWIIT**LANLLGSMDCSAFDSMRGVLGLKPYIQGLESLINF 71
                   + ++L SMD S  DSM+G++GL+PYI   E L NF
Sbjct: 42  --------ITSILNSMDPSVIDSMQGLIGLRPYIPPSEELNNF 76


>emb|CAN64921.1| hypothetical protein VITISV_017200 [Vitis vinifera]
          Length = 830

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 42/105 (40%), Positives = 54/105 (51%)
 Frame = -3

Query: 385 KLLATQTRVFIVHVSASLGPLFFPKVKEVGLMSEGNAWIITXXXXXXXXXXXXXXXXXXX 206
           KL+   TRVF+VH+S+SL    F K KE+G+MS+G AWIIT                   
Sbjct: 139 KLMTMSTRVFVVHMSSSLASRLFLKAKELGMMSKGYAWIITDG----------------- 181

Query: 205 XGNAWIIT**LANLLGSMDCSAFDSMRGVLGLKPYIQGLESLINF 71
                     + + L SMD S  DSM+G++GL PYI   E L NF
Sbjct: 182 ----------ITSFLNSMDPSVIDSMQGLVGLNPYIPPSEELNNF 216


>emb|CBI17828.3| unnamed protein product [Vitis vinifera]
          Length = 884

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 41/105 (39%), Positives = 53/105 (50%)
 Frame = -3

Query: 385 KLLATQTRVFIVHVSASLGPLFFPKVKEVGLMSEGNAWIITXXXXXXXXXXXXXXXXXXX 206
           KL+   TRVF+VH+S SL    F K KE+G++S+G AWIIT                   
Sbjct: 219 KLMTMSTRVFVVHMSCSLASRLFLKAKELGMISKGYAWIITDG----------------- 261

Query: 205 XGNAWIIT**LANLLGSMDCSAFDSMRGVLGLKPYIQGLESLINF 71
                     + + L SMD S  DSM+G++GL PYI   E L NF
Sbjct: 262 ----------ITSFLNSMDASVIDSMQGLVGLNPYIPPSEELNNF 296


>ref|XP_002462415.1| hypothetical protein SORBIDRAFT_02g025250 [Sorghum bicolor]
           gi|241925792|gb|EER98936.1| hypothetical protein
           SORBIDRAFT_02g025250 [Sorghum bicolor]
          Length = 873

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 40/106 (37%), Positives = 56/106 (52%)
 Frame = -3

Query: 388 HKLLATQTRVFIVHVSASLGPLFFPKVKEVGLMSEGNAWIITXXXXXXXXXXXXXXXXXX 209
           +KL+  QTRVF+VH+S SLG LFF K KE+G+MSEG  WIIT                  
Sbjct: 214 YKLMTMQTRVFVVHMSPSLGSLFFTKAKEIGMMSEGFVWIITDR---------------- 257

Query: 208 XXGNAWIIT**LANLLGSMDCSAFDSMRGVLGLKPYIQGLESLINF 71
                      LANL+  ++ S  ++M G LG++ Y+   + L +F
Sbjct: 258 -----------LANLIDLLNPSVVEAMNGALGVESYVPKSKELDSF 292


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