BLASTX nr result

ID: Cimicifuga21_contig00020817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020817
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165440.1| PREDICTED: mediator of RNA polymerase II tra...   202   4e-50
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...   202   4e-50
ref|XP_002277484.1| PREDICTED: uncharacterized protein LOC100247...   198   6e-49
ref|XP_003547235.1| PREDICTED: uncharacterized protein LOC100782...   196   2e-48
ref|XP_003542894.1| PREDICTED: uncharacterized protein LOC100812...   192   3e-47

>ref|XP_004165440.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            33A-like [Cucumis sativus]
          Length = 1311

 Score =  202 bits (513), Expect = 4e-50
 Identities = 96/121 (79%), Positives = 107/121 (88%)
 Frame = -2

Query: 585  YALAYFAVLCVTFAWGVDSVSAGSKRRPKVIGSHFEFMASALDGRISLGCDWATWRAYVS 406
            YALAYFAVLC  FAWG DS S+ SKRRPK++G H EF+ASALDG+ISLGCDWATWRAYV+
Sbjct: 1190 YALAYFAVLCGAFAWGTDSSSSASKRRPKILGVHMEFLASALDGKISLGCDWATWRAYVT 1249

Query: 405  GFVSLMVGCTPVWLSEVDVDVLKRLSKELRQWNEEELALALLGTSGIGAMGAAAELIIGS 226
            GFVSLMVGCTP W+ +VDV+VLKRLS  LRQWNEEELALALLG  G+GA+GAAAELII S
Sbjct: 1250 GFVSLMVGCTPSWVLDVDVEVLKRLSSGLRQWNEEELALALLGLGGVGAIGAAAELIIES 1309

Query: 225  E 223
            E
Sbjct: 1310 E 1310


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score =  202 bits (513), Expect = 4e-50
 Identities = 96/121 (79%), Positives = 107/121 (88%)
 Frame = -2

Query: 585  YALAYFAVLCVTFAWGVDSVSAGSKRRPKVIGSHFEFMASALDGRISLGCDWATWRAYVS 406
            YALAYFAVLC  FAWG DS S+ SKRRPK++G H EF+ASALDG+ISLGCDWATWRAYV+
Sbjct: 2591 YALAYFAVLCGAFAWGTDSSSSASKRRPKILGVHMEFLASALDGKISLGCDWATWRAYVT 2650

Query: 405  GFVSLMVGCTPVWLSEVDVDVLKRLSKELRQWNEEELALALLGTSGIGAMGAAAELIIGS 226
            GFVSLMVGCTP W+ +VDV+VLKRLS  LRQWNEEELALALLG  G+GA+GAAAELII S
Sbjct: 2651 GFVSLMVGCTPSWVLDVDVEVLKRLSSGLRQWNEEELALALLGLGGVGAIGAAAELIIES 2710

Query: 225  E 223
            E
Sbjct: 2711 E 2711


>ref|XP_002277484.1| PREDICTED: uncharacterized protein LOC100247741 [Vitis vinifera]
            gi|297736973|emb|CBI26174.3| unnamed protein product
            [Vitis vinifera]
          Length = 1305

 Score =  198 bits (503), Expect = 6e-49
 Identities = 96/121 (79%), Positives = 104/121 (85%)
 Frame = -2

Query: 585  YALAYFAVLCVTFAWGVDSVSAGSKRRPKVIGSHFEFMASALDGRISLGCDWATWRAYVS 406
            YALAYF VLC  F WGVDS S+ SKRRPK++GSH EF+ASALDG ISLGCD ATWRAYVS
Sbjct: 1184 YALAYFTVLCGAFVWGVDSSSSASKRRPKILGSHMEFLASALDGNISLGCDCATWRAYVS 1243

Query: 405  GFVSLMVGCTPVWLSEVDVDVLKRLSKELRQWNEEELALALLGTSGIGAMGAAAELIIGS 226
            GFVSLMVGCTP W+ EVDV+VLKRLSK LRQWNEEELALALLG  G+G M AAAELII +
Sbjct: 1244 GFVSLMVGCTPTWVLEVDVNVLKRLSKGLRQWNEEELALALLGIGGVGTMAAAAELIIET 1303

Query: 225  E 223
            E
Sbjct: 1304 E 1304


>ref|XP_003547235.1| PREDICTED: uncharacterized protein LOC100782680 [Glycine max]
          Length = 1310

 Score =  196 bits (498), Expect = 2e-48
 Identities = 98/121 (80%), Positives = 105/121 (86%)
 Frame = -2

Query: 585  YALAYFAVLCVTFAWGVDSVSAGSKRRPKVIGSHFEFMASALDGRISLGCDWATWRAYVS 406
            YALAYFAVLC  FAWGVDS SA SKRRPKV+G+H EF+ASALDG+ISLGCD ATWRAYVS
Sbjct: 1189 YALAYFAVLCGAFAWGVDSSSAASKRRPKVLGTHMEFLASALDGKISLGCDSATWRAYVS 1248

Query: 405  GFVSLMVGCTPVWLSEVDVDVLKRLSKELRQWNEEELALALLGTSGIGAMGAAAELIIGS 226
            GFVSLMVGCTP W+ EVDV VLKRLS  LRQ NEEELALALLG  G+G MGAAAELII +
Sbjct: 1249 GFVSLMVGCTPNWVLEVDVHVLKRLSNGLRQLNEEELALALLGVGGVGTMGAAAELIIDT 1308

Query: 225  E 223
            E
Sbjct: 1309 E 1309


>ref|XP_003542894.1| PREDICTED: uncharacterized protein LOC100812937 [Glycine max]
          Length = 1305

 Score =  192 bits (488), Expect = 3e-47
 Identities = 96/121 (79%), Positives = 104/121 (85%)
 Frame = -2

Query: 585  YALAYFAVLCVTFAWGVDSVSAGSKRRPKVIGSHFEFMASALDGRISLGCDWATWRAYVS 406
            YALAYFAVLC  FAWGVDS S+ SKRRPKV+G+H EF+ASALDG+ISLGCD ATWRAYVS
Sbjct: 1184 YALAYFAVLCGAFAWGVDSSSSASKRRPKVLGTHMEFLASALDGKISLGCDSATWRAYVS 1243

Query: 405  GFVSLMVGCTPVWLSEVDVDVLKRLSKELRQWNEEELALALLGTSGIGAMGAAAELIIGS 226
            GFVSLMVGCTP W+ EVDV VLKRLS  LRQ NEEELALALLG  G+G M AAAELII +
Sbjct: 1244 GFVSLMVGCTPNWVLEVDVHVLKRLSNGLRQLNEEELALALLGVGGVGTMDAAAELIIDT 1303

Query: 225  E 223
            E
Sbjct: 1304 E 1304


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