BLASTX nr result

ID: Cimicifuga21_contig00020814 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020814
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271315.1| PREDICTED: uncharacterized protein LOC100264...    89   5e-16
ref|XP_002319928.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_002325689.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002867460.1| hypothetical protein ARALYDRAFT_491952 [Arab...    64   1e-08
ref|XP_002517992.1| conserved hypothetical protein [Ricinus comm...    62   4e-08

>ref|XP_002271315.1| PREDICTED: uncharacterized protein LOC100264907 [Vitis vinifera]
          Length = 466

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 54/114 (47%), Positives = 73/114 (64%)
 Frame = -3

Query: 344 EITPIQLGKSRRGISLGPSEISAAVRPQRGKQEMTPIQRAKGQRGNTMGPSEIFAGVRSQ 165
           E + ++    RRG+SLGPSEI A VR                 RG ++GPSEI AG R +
Sbjct: 165 ESSSVRTKVHRRGVSLGPSEIVAGVR-----------------RGMSLGPSEIAAGGRLR 207

Query: 164 PRGKEELTPIRSTQQSRRKSCFYKLQGVDEEKVTKDSGGRSLSLSPKSRQAHSK 3
             GK E+TPI +  QSRRKSCF+KL+ +DE KVTK+  G+S+++SPK+R+  SK
Sbjct: 208 HLGKPEVTPIST--QSRRKSCFWKLEDIDEGKVTKER-GKSMTVSPKNRKIISK 258


>ref|XP_002319928.1| predicted protein [Populus trichocarpa] gi|222858304|gb|EEE95851.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 56/165 (33%), Positives = 92/165 (55%), Gaps = 11/165 (6%)
 Frame = -3

Query: 464 MPKMIEGAPAVNNGMKSNRKGMSMGPSDIAAGFRSQRGKPEITPIQLGKSRRGISLGPSE 285
           + KM+E    + N    + K + +   +I    +    + E+  ++L K+ R +S    +
Sbjct: 93  LSKMVEKNEEIKN---HDEKKIDIEIEEIEKEIKRLSSRLEV--LRLEKAERNLSKTVEK 147

Query: 284 ISAAV------RPQRGKQEMTPIQRAKGQ---RGNTMGPSEIFAGVRSQPR-GKEEL-TP 138
               V      + Q  K E   +  AK +   RG ++GPSEIF+G +S+   GK+E+ TP
Sbjct: 148 RGRVVAAKFMEQKQSVKIEEPLVSSAKSKINRRGVSLGPSEIFSGSKSRLLFGKQEMKTP 207

Query: 137 IRSTQQSRRKSCFYKLQGVDEEKVTKDSGGRSLSLSPKSRQAHSK 3
           + +  Q+RRKSCF+KL+ +DE K TK+  G+SLS+SP+SR+  SK
Sbjct: 208 VST--QNRRKSCFWKLEEIDELKATKER-GKSLSVSPRSRKNVSK 249


>ref|XP_002325689.1| predicted protein [Populus trichocarpa] gi|222862564|gb|EEF00071.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/87 (44%), Positives = 64/87 (73%), Gaps = 3/87 (3%)
 Frame = -3

Query: 254 KQEMTPIQRAK-GQRGNTMGPSEIFAGVRSQPR-GKEEL-TPIRSTQQSRRKSCFYKLQG 84
           ++ + P  ++K  +RG ++GPSEI +G +S+   GK+++ TP+  + Q+RRKSCF+KL+ 
Sbjct: 166 EEPLIPSSKSKINRRGVSLGPSEILSGSKSRLFCGKQDMNTPV--SIQNRRKSCFWKLEE 223

Query: 83  VDEEKVTKDSGGRSLSLSPKSRQAHSK 3
           +DE K TK+  G+SLS+SP+SR+  SK
Sbjct: 224 IDELKATKER-GKSLSVSPRSRKNVSK 249


>ref|XP_002867460.1| hypothetical protein ARALYDRAFT_491952 [Arabidopsis lyrata subsp.
           lyrata] gi|297313296|gb|EFH43719.1| hypothetical protein
           ARALYDRAFT_491952 [Arabidopsis lyrata subsp. lyrata]
          Length = 404

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/70 (51%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
 Frame = -3

Query: 218 QRGNTMGPSEIFAGVRSQPRGKEELTPIRSTQQSRRKSCFYKLQGVDEEKVTKDSGGR-S 42
           +RG ++GP+EIF   +      E +TP++S Q +RRKSCF+KL G++E KVT    GR S
Sbjct: 165 RRGVSLGPAEIFNSAKKS----ETVTPLQSAQ-NRRKSCFFKLPGIEEGKVTTRGKGRTS 219

Query: 41  LSLSPKSRQA 12
           LSLSP+SR+A
Sbjct: 220 LSLSPRSRKA 229


>ref|XP_002517992.1| conserved hypothetical protein [Ricinus communis]
           gi|223542974|gb|EEF44510.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 443

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/72 (45%), Positives = 54/72 (75%)
 Frame = -3

Query: 218 QRGNTMGPSEIFAGVRSQPRGKEELTPIRSTQQSRRKSCFYKLQGVDEEKVTKDSGGRSL 39
           +RG ++GPSEI++  +++   K+E++   ST+ +RRKSCF+KL+ +DE K TK+  G+S 
Sbjct: 178 RRGVSLGPSEIYSATKARLLSKQEMSTPVSTK-NRRKSCFWKLEEIDELKATKER-GKSS 235

Query: 38  SLSPKSRQAHSK 3
           S+SP+SR+  SK
Sbjct: 236 SVSPRSRKNLSK 247


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