BLASTX nr result

ID: Cimicifuga21_contig00020807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020807
         (1293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280163.2| PREDICTED: protein BCCIP homolog [Vitis vini...   386   e-105
emb|CBI37700.3| unnamed protein product [Vitis vinifera]              386   e-105
ref|XP_002280933.1| PREDICTED: protein BCCIP homolog [Vitis vini...   368   2e-99
ref|XP_002300556.1| predicted protein [Populus trichocarpa] gi|2...   360   4e-97
emb|CBI26873.3| unnamed protein product [Vitis vinifera]              359   7e-97

>ref|XP_002280163.2| PREDICTED: protein BCCIP homolog [Vitis vinifera]
          Length = 335

 Score =  386 bits (991), Expect = e-105
 Identities = 203/331 (61%), Positives = 246/331 (74%), Gaps = 6/331 (1%)
 Frame = +1

Query: 28   KVMPRKPIKRHCGVS-RTRPFAFSSFGRSVARVAS----NRRQLNPLSRRRDLFESTGNG 192
            K MPRKP +  C  S R  PF FS F R+VA+VAS    N +       ++    + GNG
Sbjct: 8    KEMPRKPTR--CRPSPRPLPFTFSPFFRTVAQVASYCKANHQIHESKFHKKSPPNAAGNG 65

Query: 193  SSKKTLKEKIVRXXXXXXXXXXXIVQADFVFFDPKPEDFHGVKILLRNFLDDKQWDLSGF 372
                TL+EK  +           + QA+F FFDPKP+DFHGVKILL+ +LD+K WDLSGF
Sbjct: 66   IINHTLEEKSEQSEYSDEDCSEVVAQANFAFFDPKPDDFHGVKILLQTYLDNKLWDLSGF 125

Query: 373  VDLILGQTTVGTVIKIEDDEDDTPFSVVSTLNLGRYKDHRCIMEIKDFLLKVCQ-KDVIP 549
            VDLILGQTTVGTV+KIE DEDD  FS+++ LNLGRYK H+C+ME+K+FLL V Q KDV  
Sbjct: 126  VDLILGQTTVGTVVKIEGDEDDGVFSLITALNLGRYKGHKCVMELKEFLLDVGQEKDVKD 185

Query: 550  DLRMLLEGHAHNVGLLVSQRVVNLPPQLLPPFYDALFDEISWATEDEPTEELRESFRFKF 729
             LR+LL   A NVGLLVSQRVVNLPPQLLPP YDALFDEISWATEDEPTEELR SF FKF
Sbjct: 186  ALRLLLGEEAQNVGLLVSQRVVNLPPQLLPPLYDALFDEISWATEDEPTEELRSSFCFKF 245

Query: 730  YLIATKIYKHRSANQHKGTSKGRTDDPLIYVKPEDEIFHKLSSWSFNFTLRTEQLASQEL 909
            +L+ ++IYKH++A Q KGT +   D+ +IY+KPEDEIFHKLSSWSF+F L T+ + + EL
Sbjct: 246  FLLISRIYKHKNAGQRKGT-RVDIDEAIIYIKPEDEIFHKLSSWSFSFPLHTQHVTTHEL 304

Query: 910  RNYRLTGLVMAVEAGKIPIFRKELHSLINDP 1002
            RNYRL GLVMA+EA K+  FRKELH+LI++P
Sbjct: 305  RNYRLMGLVMAIEADKVSTFRKELHTLIDEP 335


>emb|CBI37700.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  386 bits (991), Expect = e-105
 Identities = 203/331 (61%), Positives = 246/331 (74%), Gaps = 6/331 (1%)
 Frame = +1

Query: 28   KVMPRKPIKRHCGVS-RTRPFAFSSFGRSVARVAS----NRRQLNPLSRRRDLFESTGNG 192
            K MPRKP +  C  S R  PF FS F R+VA+VAS    N +       ++    + GNG
Sbjct: 61   KEMPRKPTR--CRPSPRPLPFTFSPFFRTVAQVASYCKANHQIHESKFHKKSPPNAAGNG 118

Query: 193  SSKKTLKEKIVRXXXXXXXXXXXIVQADFVFFDPKPEDFHGVKILLRNFLDDKQWDLSGF 372
                TL+EK  +           + QA+F FFDPKP+DFHGVKILL+ +LD+K WDLSGF
Sbjct: 119  IINHTLEEKSEQSEYSDEDCSEVVAQANFAFFDPKPDDFHGVKILLQTYLDNKLWDLSGF 178

Query: 373  VDLILGQTTVGTVIKIEDDEDDTPFSVVSTLNLGRYKDHRCIMEIKDFLLKVCQ-KDVIP 549
            VDLILGQTTVGTV+KIE DEDD  FS+++ LNLGRYK H+C+ME+K+FLL V Q KDV  
Sbjct: 179  VDLILGQTTVGTVVKIEGDEDDGVFSLITALNLGRYKGHKCVMELKEFLLDVGQEKDVKD 238

Query: 550  DLRMLLEGHAHNVGLLVSQRVVNLPPQLLPPFYDALFDEISWATEDEPTEELRESFRFKF 729
             LR+LL   A NVGLLVSQRVVNLPPQLLPP YDALFDEISWATEDEPTEELR SF FKF
Sbjct: 239  ALRLLLGEEAQNVGLLVSQRVVNLPPQLLPPLYDALFDEISWATEDEPTEELRSSFCFKF 298

Query: 730  YLIATKIYKHRSANQHKGTSKGRTDDPLIYVKPEDEIFHKLSSWSFNFTLRTEQLASQEL 909
            +L+ ++IYKH++A Q KGT +   D+ +IY+KPEDEIFHKLSSWSF+F L T+ + + EL
Sbjct: 299  FLLISRIYKHKNAGQRKGT-RVDIDEAIIYIKPEDEIFHKLSSWSFSFPLHTQHVTTHEL 357

Query: 910  RNYRLTGLVMAVEAGKIPIFRKELHSLINDP 1002
            RNYRL GLVMA+EA K+  FRKELH+LI++P
Sbjct: 358  RNYRLMGLVMAIEADKVSTFRKELHTLIDEP 388


>ref|XP_002280933.1| PREDICTED: protein BCCIP homolog [Vitis vinifera]
          Length = 333

 Score =  368 bits (945), Expect = 2e-99
 Identities = 196/334 (58%), Positives = 245/334 (73%), Gaps = 7/334 (2%)
 Frame = +1

Query: 34   MPRKPIKRHCG-VSRTRPFAFSSFGRSVARVAS-----NRRQLNPLSRRRDLFESTGNGS 195
            MPRKP +R    + R  PF+FS F R+V++VAS     ++  ++ L R+     + GN  
Sbjct: 1    MPRKPARRRRRQLLRPLPFSFSPFSRTVSQVASYCKVNHQIHVSKLDRKSPP-NAAGNRF 59

Query: 196  SKKTLKEKIVRXXXXXXXXXXXIVQADFVFFDPKPEDFHGVKILLRNFLDDKQWDLSGFV 375
               TL+EK  R           + QADF FFDPKP+DFHGVKILL+ +LD+KQWDLSGFV
Sbjct: 60   INHTLEEKSARSESSEEDSSEVVAQADFAFFDPKPDDFHGVKILLQTYLDNKQWDLSGFV 119

Query: 376  DLILGQTTVGTVIKIEDDEDDTPFSVVSTLNLGRYKDHRCIMEIKDFLLKV-CQKDVIPD 552
            DLILG TTVGTV+KIEDDEDD  FS+++ LNLGRYKDH+CIME+K+FLLKV  ++DV   
Sbjct: 120  DLILGNTTVGTVVKIEDDEDDGVFSLITALNLGRYKDHKCIMELKEFLLKVGPEEDVKDS 179

Query: 553  LRMLLEGHAHNVGLLVSQRVVNLPPQLLPPFYDALFDEISWATEDEPTEELRESFRFKFY 732
            LR+LL   AHNVGL VSQ VVNLPPQLLPP  DALFDE+SWATEDEPT ELR SF FK Y
Sbjct: 180  LRLLLGEEAHNVGLSVSQCVVNLPPQLLPPLCDALFDEVSWATEDEPTVELRSSFSFKIY 239

Query: 733  LIATKIYKHRSANQHKGTSKGRTDDPLIYVKPEDEIFHKLSSWSFNFTLRTEQLASQELR 912
            L+ ++IYKH++A+Q KG  +G  D+ +IY+K EDEIFHKL SWSF+F L T+ +A+  LR
Sbjct: 240  LLISRIYKHKNADQKKG-PRGDVDEAIIYIKLEDEIFHKL-SWSFSFPLHTQHVATHRLR 297

Query: 913  NYRLTGLVMAVEAGKIPIFRKELHSLINDP*GLE 1014
            NY+L  LVMA+EA K   F KELH+L+++P G E
Sbjct: 298  NYQLMWLVMAIEADKASTFWKELHTLLDEPRGHE 331


>ref|XP_002300556.1| predicted protein [Populus trichocarpa] gi|222847814|gb|EEE85361.1|
            predicted protein [Populus trichocarpa]
          Length = 337

 Score =  360 bits (924), Expect = 4e-97
 Identities = 192/341 (56%), Positives = 241/341 (70%), Gaps = 18/341 (5%)
 Frame = +1

Query: 34   MPRKPIKRHCGVSRTRPFAFSSFGRSVARVAS-----------------NRRQLNPLSRR 162
            MPRKP +R   +   RP  F+ F RS+A + S                 +  +  P S  
Sbjct: 1    MPRKPTRRRRSLI-ARPLTFAPFSRSLAHLHSTFMPKHQMLGSKVPGSPSHNEGVPDSIS 59

Query: 163  RDLFESTGNGSSKKTLKEKIVRXXXXXXXXXXXIVQADFVFFDPKPEDFHGVKILLRNFL 342
              L++  G    KKT KEKI +            VQADF FFDPKP+DFHGVKILL+++L
Sbjct: 60   LTLYQ--GGAVVKKTSKEKIEQSESSEEEEFGGEVQADFAFFDPKPDDFHGVKILLQSYL 117

Query: 343  DDKQWDLSGFVDLILGQTTVGTVIKIEDDEDDTPFSVVSTLNLGRYKDHRCIMEIKDFLL 522
            D+ +WDLSGFVDLIL QTTVGTV+KIEDDED+  FSVVS LNLGRYKDH+CI ++K++LL
Sbjct: 118  DNTEWDLSGFVDLILEQTTVGTVVKIEDDEDNGLFSVVSALNLGRYKDHKCIADLKEYLL 177

Query: 523  KVC-QKDVIPDLRMLLEGHAHNVGLLVSQRVVNLPPQLLPPFYDALFDEISWATEDEPTE 699
            K+C +K +  DLR+LL   AHNVGLLVS+RVVNLPPQLLPP YD+LFDEISWATEDEPTE
Sbjct: 178  KLCLEKSIKGDLRVLLGEQAHNVGLLVSRRVVNLPPQLLPPLYDSLFDEISWATEDEPTE 237

Query: 700  ELRESFRFKFYLIATKIYKHRSANQHKGTSKGRTDDPLIYVKPEDEIFHKLSSWSFNFTL 879
            ELR SF F  Y++ +K+YKH++A++ K      +++ +IYV PEDEIFHKLS WSFNF  
Sbjct: 238  ELRNSFCFNSYVLVSKMYKHKNADK-KNRLSSDSEEAIIYVNPEDEIFHKLSLWSFNFPF 296

Query: 880  RTEQLASQELRNYRLTGLVMAVEAGKIPIFRKELHSLINDP 1002
              EQ+ ++EL+NYR  GLVMAVEA KI  FR++L SLI++P
Sbjct: 297  HAEQVTARELKNYRPMGLVMAVEADKISTFREQLRSLIDEP 337


>emb|CBI26873.3| unnamed protein product [Vitis vinifera]
          Length = 366

 Score =  359 bits (922), Expect = 7e-97
 Identities = 196/346 (56%), Positives = 245/346 (70%), Gaps = 19/346 (5%)
 Frame = +1

Query: 34   MPRKPIKRHCG-VSRTRPFAFSSFGRSVARVAS-----NRRQLNPLSRRRDLFESTGNGS 195
            MPRKP +R    + R  PF+FS F R+V++VAS     ++  ++ L R+     + GN  
Sbjct: 1    MPRKPARRRRRQLLRPLPFSFSPFSRTVSQVASYCKVNHQIHVSKLDRKSPP-NAAGNRF 59

Query: 196  SKKTLKEKIVRXXXXXXXXXXXIVQADFVFFDPKPEDFHGVKILLRNFLDDKQWDLSGFV 375
               TL+EK  R           + QADF FFDPKP+DFHGVKILL+ +LD+KQWDLSGFV
Sbjct: 60   INHTLEEKSARSESSEEDSSEVVAQADFAFFDPKPDDFHGVKILLQTYLDNKQWDLSGFV 119

Query: 376  DLILGQTTVGTVIKIEDDEDDTPFSVVSTLNLGRYKDHRCIMEIKDFLLKV-CQKDVIPD 552
            DLILG TTVGTV+KIEDDEDD  FS+++ LNLGRYKDH+CIME+K+FLLKV  ++DV   
Sbjct: 120  DLILGNTTVGTVVKIEDDEDDGVFSLITALNLGRYKDHKCIMELKEFLLKVGPEEDVKDS 179

Query: 553  LRMLLEGHAHNVGLLVSQRVVNLPPQLLPPFYDALFDEISWATEDEPTEELRESFRFKFY 732
            LR+LL   AHNVGL VSQ VVNLPPQLLPP  DALFDE+SWATEDEPT ELR SF FK Y
Sbjct: 180  LRLLLGEEAHNVGLSVSQCVVNLPPQLLPPLCDALFDEVSWATEDEPTVELRSSFSFKIY 239

Query: 733  LIATKIYKHRSANQHKGTSKGRTDDPLIYVKPEDEIFHKLSSWSFNFTLRTEQLASQE-- 906
            L+ ++IYKH++A+Q KG  +G  D+ +IY+K EDEIFHKL SWSF+F L T+ +A+    
Sbjct: 240  LLISRIYKHKNADQKKG-PRGDVDEAIIYIKLEDEIFHKL-SWSFSFPLHTQHVATHRAS 297

Query: 907  ----------LRNYRLTGLVMAVEAGKIPIFRKELHSLINDP*GLE 1014
                      LRNY+L  LVMA+EA K   F KELH+L+++P G E
Sbjct: 298  SGVISLSLFLLRNYQLMWLVMAIEADKASTFWKELHTLLDEPRGHE 343


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