BLASTX nr result

ID: Cimicifuga21_contig00020762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020762
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285669.1| PREDICTED: uncharacterized protein LOC100259...   193   1e-47
emb|CBI33363.3| unnamed protein product [Vitis vinifera]              193   1e-47
ref|XP_002518117.1| conserved hypothetical protein [Ricinus comm...   191   4e-47
ref|XP_002297812.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42
ref|NP_193103.2| protein plastid transcriptionally active 5 [Ara...   169   2e-40

>ref|XP_002285669.1| PREDICTED: uncharacterized protein LOC100259626 [Vitis vinifera]
          Length = 372

 Score =  193 bits (490), Expect = 1e-47
 Identities = 89/127 (70%), Positives = 101/127 (79%)
 Frame = +3

Query: 18  QESANGASVASVTEVSEIKQVVEKTSGDAEVEASHPRVFLLGENRWEDSSRLVSREKKVG 197
           +E  NGA VASVTE+SEI+Q V K  G  EVE S  RVFLLGENRWE+ SRLV R+KK G
Sbjct: 246 KEGVNGALVASVTEISEIQQKVLKEEGFTEVEVSQQRVFLLGENRWEEPSRLVGRDKKGG 305

Query: 198 VNTVGISTTKCIVCRGEGHVLCTECDGTGEPNLEPQFLEWVDEGAKCPYCEGLGYNICDV 377
            N    +TTKC+ CRGEG ++CTECDGTGEPN+EPQFL+WVDEG KCPYCEGLG+ ICD 
Sbjct: 306 GNKPKDATTKCLTCRGEGRLMCTECDGTGEPNIEPQFLDWVDEGVKCPYCEGLGHTICDA 365

Query: 378 CEGKTII 398
           CEGKT I
Sbjct: 366 CEGKTTI 372


>emb|CBI33363.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  193 bits (490), Expect = 1e-47
 Identities = 89/127 (70%), Positives = 101/127 (79%)
 Frame = +3

Query: 18  QESANGASVASVTEVSEIKQVVEKTSGDAEVEASHPRVFLLGENRWEDSSRLVSREKKVG 197
           +E  NGA VASVTE+SEI+Q V K  G  EVE S  RVFLLGENRWE+ SRLV R+KK G
Sbjct: 112 KEGVNGALVASVTEISEIQQKVLKEEGFTEVEVSQQRVFLLGENRWEEPSRLVGRDKKGG 171

Query: 198 VNTVGISTTKCIVCRGEGHVLCTECDGTGEPNLEPQFLEWVDEGAKCPYCEGLGYNICDV 377
            N    +TTKC+ CRGEG ++CTECDGTGEPN+EPQFL+WVDEG KCPYCEGLG+ ICD 
Sbjct: 172 GNKPKDATTKCLTCRGEGRLMCTECDGTGEPNIEPQFLDWVDEGVKCPYCEGLGHTICDA 231

Query: 378 CEGKTII 398
           CEGKT I
Sbjct: 232 CEGKTTI 238


>ref|XP_002518117.1| conserved hypothetical protein [Ricinus communis]
           gi|223542713|gb|EEF44250.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 386

 Score =  191 bits (486), Expect = 4e-47
 Identities = 89/129 (68%), Positives = 106/129 (82%)
 Frame = +3

Query: 12  AMQESANGASVASVTEVSEIKQVVEKTSGDAEVEASHPRVFLLGENRWEDSSRLVSREKK 191
           + +ESANGA+VAS+TE+SE +Q + K  G  EV+ S  RVFLLGENRWE+ SRLVS++K+
Sbjct: 259 SQKESANGAAVASITEISETQQKIVK-DGVTEVKGSQQRVFLLGENRWEEPSRLVSKDKQ 317

Query: 192 VGVNTVGISTTKCIVCRGEGHVLCTECDGTGEPNLEPQFLEWVDEGAKCPYCEGLGYNIC 371
           VGV+    S TKC+ CRGEG +LCTECDGTGEPN+EPQFLEWV EG KCPYCEGLGY  C
Sbjct: 318 VGVSKPKDSMTKCLSCRGEGRLLCTECDGTGEPNIEPQFLEWVGEGMKCPYCEGLGYTTC 377

Query: 372 DVCEGKTII 398
           DVCEGKT+I
Sbjct: 378 DVCEGKTLI 386


>ref|XP_002297812.1| predicted protein [Populus trichocarpa] gi|222845070|gb|EEE82617.1|
           predicted protein [Populus trichocarpa]
          Length = 395

 Score =  176 bits (446), Expect = 2e-42
 Identities = 84/127 (66%), Positives = 97/127 (76%)
 Frame = +3

Query: 18  QESANGASVASVTEVSEIKQVVEKTSGDAEVEASHPRVFLLGENRWEDSSRLVSREKKVG 197
           +E A+GA+V SVTE+SEI Q V K     EV+ SH RVFLLGENRWE+ SRL  R+K+V 
Sbjct: 270 EEGADGAAVTSVTEISEIHQKVVKEEV-TEVDVSHHRVFLLGENRWEEPSRLNGRKKQVS 328

Query: 198 VNTVGISTTKCIVCRGEGHVLCTECDGTGEPNLEPQFLEWVDEGAKCPYCEGLGYNICDV 377
            +    ST +C+ CRGEG +LCTECDGTGEPN+EPQFLEWV EGA CPYCEG GY ICDV
Sbjct: 329 GSKTKDSTKQCLTCRGEGRLLCTECDGTGEPNVEPQFLEWVGEGANCPYCEGQGYTICDV 388

Query: 378 CEGKTII 398
           C GKT I
Sbjct: 389 CAGKTTI 395


>ref|NP_193103.2| protein plastid transcriptionally active 5 [Arabidopsis thaliana]
           gi|119360137|gb|ABL66797.1| At4g13670 [Arabidopsis
           thaliana] gi|332657911|gb|AEE83311.1| protein plastid
           transcriptionally active 5 [Arabidopsis thaliana]
          Length = 387

 Score =  169 bits (429), Expect = 2e-40
 Identities = 75/124 (60%), Positives = 91/124 (73%)
 Frame = +3

Query: 18  QESANGASVASVTEVSEIKQVVEKTSGDAEVEASHPRVFLLGENRWEDSSRLVSREKKVG 197
           +E+ NGA   SVT+V E KQ + K   D EV+ +  RVFLLGENRWED SRL+ R K V 
Sbjct: 261 EEAGNGAVFTSVTQVPEKKQSIVKDQSDREVDVTQNRVFLLGENRWEDPSRLIGRNKPVD 320

Query: 198 VNTVGISTTKCIVCRGEGHVLCTECDGTGEPNLEPQFLEWVDEGAKCPYCEGLGYNICDV 377
            +    + T+CI CRGEG ++C ECDGTGEPN+EPQF+EWV E  KCPYCEGLGY +CDV
Sbjct: 321 RSESTNTKTRCITCRGEGRLMCLECDGTGEPNIEPQFMEWVGEDTKCPYCEGLGYTVCDV 380

Query: 378 CEGK 389
           C+GK
Sbjct: 381 CDGK 384


Top