BLASTX nr result

ID: Cimicifuga21_contig00020761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020761
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002870363.1| predicted protein [Arabidopsis lyrata subsp....    77   3e-12
ref|NP_193103.2| protein plastid transcriptionally active 5 [Ara...    73   5e-11
emb|CAB36831.1| hypothetical protein [Arabidopsis thaliana] gi|7...    73   5e-11
ref|XP_004157670.1| PREDICTED: uncharacterized LOC101215886 [Cuc...    65   1e-08
ref|XP_004134005.1| PREDICTED: uncharacterized protein LOC101215...    65   1e-08

>ref|XP_002870363.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316199|gb|EFH46622.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 394

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 53/129 (41%), Positives = 68/129 (52%), Gaps = 9/129 (6%)
 Frame = +3

Query: 285 RWNSEQESLLQEIANLKNKIQALERQNSLQGDLVPEKMSNIANLLQVLKEVDLSSVNQNQ 464
           RW  E+ESLLQEI+NL+ KIQALE +NS  G  VP+ +SNIA LLQ LKE       +N+
Sbjct: 77  RWIRERESLLQEISNLQLKIQALESRNSQLGTSVPDTISNIAALLQGLKE-------KNR 129

Query: 465 ISETGSGPVPMXXXXXXXXXXXXXXXXXXXXXXXXXAKQKV---------KKMAPLRKGS 617
           ISE+G    PM                         A++KV         KK   L+ GS
Sbjct: 130 ISESGLSATPMVLESTREQIVEEVVEVEEEEKRVVIAEEKVMVSEPVKKKKKRRTLKVGS 189

Query: 618 EGEEVHAMQ 644
           EG++V A+Q
Sbjct: 190 EGDDVQALQ 198


>ref|NP_193103.2| protein plastid transcriptionally active 5 [Arabidopsis thaliana]
           gi|119360137|gb|ABL66797.1| At4g13670 [Arabidopsis
           thaliana] gi|332657911|gb|AEE83311.1| protein plastid
           transcriptionally active 5 [Arabidopsis thaliana]
          Length = 387

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 49/128 (38%), Positives = 71/128 (55%), Gaps = 8/128 (6%)
 Frame = +3

Query: 285 RWNSEQESLLQEIANLKNKIQALERQNSLQGDLVPEKMSNIANLLQVLKEVDLSSVNQNQ 464
           RW  E+ESLLQEI++L+ +IQ+LE +NS  G+ +P+ +SNIA LLQVLKE       +N+
Sbjct: 74  RWIRERESLLQEISDLQLRIQSLESRNSQLGNSIPDTISNIAALLQVLKE-------KNR 126

Query: 465 ISETGSGPVPMXXXXXXXXXXXXXXXXXXXXXXXXXAKQKVKKMAPLRK--------GSE 620
           ISE+G    PM                         A++KV+   P++K        GSE
Sbjct: 127 ISESGLSATPM---VLESTREQIVEEVEEEEKRVIIAEEKVRVSEPVKKIKRRILKVGSE 183

Query: 621 GEEVHAMQ 644
           G++V A+Q
Sbjct: 184 GDDVQALQ 191


>emb|CAB36831.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268071|emb|CAB78409.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 432

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 49/128 (38%), Positives = 71/128 (55%), Gaps = 8/128 (6%)
 Frame = +3

Query: 285 RWNSEQESLLQEIANLKNKIQALERQNSLQGDLVPEKMSNIANLLQVLKEVDLSSVNQNQ 464
           RW  E+ESLLQEI++L+ +IQ+LE +NS  G+ +P+ +SNIA LLQVLKE       +N+
Sbjct: 74  RWIRERESLLQEISDLQLRIQSLESRNSQLGNSIPDTISNIAALLQVLKE-------KNR 126

Query: 465 ISETGSGPVPMXXXXXXXXXXXXXXXXXXXXXXXXXAKQKVKKMAPLRK--------GSE 620
           ISE+G    PM                         A++KV+   P++K        GSE
Sbjct: 127 ISESGLSATPM---VLESTREQIVEEVEEEEKRVIIAEEKVRVSEPVKKIKRRILKVGSE 183

Query: 621 GEEVHAMQ 644
           G++V A+Q
Sbjct: 184 GDDVQALQ 191


>ref|XP_004157670.1| PREDICTED: uncharacterized LOC101215886 [Cucumis sativus]
          Length = 392

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 55/130 (42%), Positives = 67/130 (51%), Gaps = 10/130 (7%)
 Frame = +3

Query: 285 RWNSEQESLLQEIANLKNKIQALERQNSLQGDL--VPEKMSNIANLLQVLKEVDLSSVNQ 458
           RW  E++SLLQEIA LK +IQALER+NS+QG    V E ++NIA LLQVLKE       +
Sbjct: 77  RWARERQSLLQEIAELKLQIQALERRNSVQGGTISVSETIANIAGLLQVLKE-------K 129

Query: 459 NQISETGSGPV-------PMXXXXXXXXXXXXXXXXXXXXXXXXXAKQKVKK-MAPLRKG 614
           N I+E  SGP                                   A+++VKK    LR G
Sbjct: 130 NLIAE--SGPTVSRILLDESSREEDVEIEKKTIVEEVVKFSEESKAEKEVKKERKSLRTG 187

Query: 615 SEGEEVHAMQ 644
           SEG EV AMQ
Sbjct: 188 SEGAEVLAMQ 197


>ref|XP_004134005.1| PREDICTED: uncharacterized protein LOC101215886 [Cucumis sativus]
          Length = 392

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 55/130 (42%), Positives = 67/130 (51%), Gaps = 10/130 (7%)
 Frame = +3

Query: 285 RWNSEQESLLQEIANLKNKIQALERQNSLQGDL--VPEKMSNIANLLQVLKEVDLSSVNQ 458
           RW  E++SLLQEIA LK +IQALER+NS+QG    V E ++NIA LLQVLKE       +
Sbjct: 77  RWARERQSLLQEIAELKLQIQALERRNSVQGGTISVSETIANIAGLLQVLKE-------K 129

Query: 459 NQISETGSGPV-------PMXXXXXXXXXXXXXXXXXXXXXXXXXAKQKVKK-MAPLRKG 614
           N I+E  SGP                                   A+++VKK    LR G
Sbjct: 130 NLIAE--SGPTVSRILLDESSREEDVEIEKKTIVEEVVKFSEESKAEKEVKKERKSLRTG 187

Query: 615 SEGEEVHAMQ 644
           SEG EV AMQ
Sbjct: 188 SEGAEVLAMQ 197


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