BLASTX nr result

ID: Cimicifuga21_contig00020745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020745
         (911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vit...   245   9e-63
emb|CAN67721.1| hypothetical protein VITISV_006020 [Vitis vinifera]   241   1e-61
emb|CBI22513.3| unnamed protein product [Vitis vinifera]              236   7e-60
ref|XP_004137093.1| PREDICTED: DNA repair protein REV1-like [Cuc...   223   6e-56
ref|XP_002313880.1| predicted protein [Populus trichocarpa] gi|2...   217   3e-54

>ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vitis vinifera]
          Length = 1175

 Score =  245 bits (626), Expect = 9e-63
 Identities = 134/244 (54%), Positives = 166/244 (68%), Gaps = 2/244 (0%)
 Frame = -3

Query: 726 NQKTLGMAWXXXXXXXXXXXXXXXXXXXXXSYMVEKNRKLQDQFDAVATTSINDSSNSGS 547
           NQKTLGMAW                     SYMVEKNRKLQ+QFDA A++S + + +SG 
Sbjct: 38  NQKTLGMAWGSNSRSSSRSSFRNSPFSDFGSYMVEKNRKLQNQFDAGASSSSHSALSSG- 96

Query: 546 KPLFHGVSIFVDGFTVPSSQELKAYMLKYGGRFENYFSRSRVTHIICSNLPDSKIKNIRS 367
           KP+FHGVS+FVDGFT+PSSQEL+ YM+++GG FENYFSR RVTHIICSNLPDSKIKN+RS
Sbjct: 97  KPIFHGVSVFVDGFTIPSSQELRGYMMRHGGHFENYFSRHRVTHIICSNLPDSKIKNLRS 156

Query: 366 FSRGLPVVKPTWVLDSVTANKLLNWLPYQLDQLVSEIHKQPKLSAFFVPKTDSRLEEAKT 187
           FS GLPVVKPTWVLDSV ANKLL+W+PYQLDQL +E   QPKLSAFF  K+    E+A T
Sbjct: 157 FSGGLPVVKPTWVLDSVAANKLLSWIPYQLDQLANETRNQPKLSAFFALKSIPVFEDAVT 216

Query: 186 PNCD--VNLEDGFLPKSAASQEAPSCEVGESIDYSPEFNEEMPISSQGKFCEVIKAVPTS 13
                 V   +  + K   S++A S E G+ ++Y+ + + E+         E I   P S
Sbjct: 217 HTTYPLVPETEDSVFKGGTSKDAVSSEGGQYLEYTRQSSGEIDDHQCENTNETIIEKPFS 276

Query: 12  SEEK 1
           ++EK
Sbjct: 277 NDEK 280


>emb|CAN67721.1| hypothetical protein VITISV_006020 [Vitis vinifera]
          Length = 500

 Score =  241 bits (616), Expect = 1e-61
 Identities = 128/218 (58%), Positives = 155/218 (71%), Gaps = 2/218 (0%)
 Frame = -3

Query: 726 NQKTLGMAWXXXXXXXXXXXXXXXXXXXXXSYMVEKNRKLQDQFDAVATTSINDSSNSGS 547
           NQKTLGMAW                     SYMVEKNRKLQ+QFDA A++S + + +SG 
Sbjct: 38  NQKTLGMAWGSNSRSSSRSSFRNSPFSDFGSYMVEKNRKLQNQFDAGASSSSHSAXSSG- 96

Query: 546 KPLFHGVSIFVDGFTVPSSQELKAYMLKYGGRFENYFSRSRVTHIICSNLPDSKIKNIRS 367
           KP+FHGVS FVDGFT+PSSQEL+ YM+++GG FENYFSR RVTHIICSNLPDSKIKN+RS
Sbjct: 97  KPIFHGVSXFVDGFTIPSSQELRGYMMRHGGHFENYFSRHRVTHIICSNLPDSKIKNLRS 156

Query: 366 FSRGLPVVKPTWVLDSVTANKLLNWLPYQLDQLVSEIHKQPKLSAFFVPKTDSRLEEAKT 187
           FS GLPVVKPTWVLDSV ANKLL+W+PYQLDQL +E   QPKLSAFF  K+    E+A T
Sbjct: 157 FSGGLPVVKPTWVLDSVAANKLLSWIPYQLDQLANETRNQPKLSAFFALKSIPVFEDAVT 216

Query: 186 PNCD--VNLEDGFLPKSAASQEAPSCEVGESIDYSPEF 79
                 V   +  + K   S++A S E G+ ++Y+ +F
Sbjct: 217 HTTYPLVPETEDSVFKGGTSKDAVSSEGGQYLEYTRQF 254


>emb|CBI22513.3| unnamed protein product [Vitis vinifera]
          Length = 1123

 Score =  236 bits (601), Expect = 7e-60
 Identities = 119/180 (66%), Positives = 138/180 (76%)
 Frame = -3

Query: 726 NQKTLGMAWXXXXXXXXXXXXXXXXXXXXXSYMVEKNRKLQDQFDAVATTSINDSSNSGS 547
           NQKTLGMAW                     SYMVEKNRKLQ+QFDA A++S + + +SG 
Sbjct: 38  NQKTLGMAWGSNSRSSSRSSFRNSPFSDFGSYMVEKNRKLQNQFDAGASSSSHSALSSG- 96

Query: 546 KPLFHGVSIFVDGFTVPSSQELKAYMLKYGGRFENYFSRSRVTHIICSNLPDSKIKNIRS 367
           KP+FHGVS+FVDGFT+PSSQEL+ YM+++GG FENYFSR RVTHIICSNLPDSKIKN+RS
Sbjct: 97  KPIFHGVSVFVDGFTIPSSQELRGYMMRHGGHFENYFSRHRVTHIICSNLPDSKIKNLRS 156

Query: 366 FSRGLPVVKPTWVLDSVTANKLLNWLPYQLDQLVSEIHKQPKLSAFFVPKTDSRLEEAKT 187
           FS GLPVVKPTWVLDSV ANKLL+W+PYQLDQL +E   QPKLSAFF  K+    E+A T
Sbjct: 157 FSGGLPVVKPTWVLDSVAANKLLSWIPYQLDQLANETRNQPKLSAFFALKSIPVFEDAVT 216


>ref|XP_004137093.1| PREDICTED: DNA repair protein REV1-like [Cucumis sativus]
          Length = 1155

 Score =  223 bits (567), Expect = 6e-56
 Identities = 121/228 (53%), Positives = 151/228 (66%), Gaps = 3/228 (1%)
 Frame = -3

Query: 726 NQKTLGMAWXXXXXXXXXXXXXXXXXXXXXSYMVEKNRKLQDQFDAVATTSINDSSNSGS 547
           NQKTLG+AW                      YMVEKNRKL +QF+  A+++ +   NSG+
Sbjct: 40  NQKTLGVAWGANSISSSRKSPFSDFGS----YMVEKNRKLHNQFNLDASSASHSGVNSGN 95

Query: 546 KPLFHGVSIFVDGFTVPSSQELKAYMLKYGGRFENYFSRSRVTHIICSNLPDSKIKNIRS 367
           + +F GVSIFVDGFT+PSSQEL+ YMLKYGGRFENYFSR  V+HIICSNLPDSKIKN+RS
Sbjct: 96  Q-IFQGVSIFVDGFTIPSSQELRGYMLKYGGRFENYFSRRSVSHIICSNLPDSKIKNLRS 154

Query: 366 FSRGLPVVKPTWVLDSVTANKLLNWLPYQLDQLVSEIHKQPKLSAFFVPKTDSRLEEAK- 190
           FSRGLPVVKPTW+LDSV +NKLL+W+PYQLDQLV   + QP+LS FF  K    +E+ K 
Sbjct: 155 FSRGLPVVKPTWILDSVASNKLLSWVPYQLDQLV---NNQPRLSEFFSMKKGPTVEKPKI 211

Query: 189 --TPNCDVNLEDGFLPKSAASQEAPSCEVGESIDYSPEFNEEMPISSQ 52
             T       ED   P +   ++    EV ES+ Y  E + +  ++ Q
Sbjct: 212 CLTSEKKYETEDSLSPVAMNLKDTTLSEVNESVGYRAELHSDSEMNLQ 259


>ref|XP_002313880.1| predicted protein [Populus trichocarpa] gi|222850288|gb|EEE87835.1|
           predicted protein [Populus trichocarpa]
          Length = 1191

 Score =  217 bits (553), Expect = 3e-54
 Identities = 129/252 (51%), Positives = 158/252 (62%), Gaps = 10/252 (3%)
 Frame = -3

Query: 732 DQNQKTLGMAWXXXXXXXXXXXXXXXXXXXXXSYMVEKNRKLQDQFDAVATTSINDSSNS 553
           +  QKTLGM                       SYMVEKNRKLQ QF+A A+TS +  S+S
Sbjct: 31  NSKQKTLGMGRGANSLSSSRPSFRNSPFSNFGSYMVEKNRKLQHQFEAEASTSSHPGSSS 90

Query: 552 GSKPLFHGVSIFVDGFTVPSSQELKAYMLKYGGRFENYFSRSRVTHIICSNLPDSKIKNI 373
           G K +F GVSIF+DGFT+PS+QEL+AYMLKYGGRF NYFSR +VTHIICS+LPDSKIKN+
Sbjct: 91  G-KLIFQGVSIFIDGFTIPSNQELRAYMLKYGGRFANYFSRHQVTHIICSSLPDSKIKNL 149

Query: 372 RSFSRGLPVVKPTWVLDSVTANKLLNWLPYQLDQLVSEIHKQPKLSAFFVPKTDSRLEEA 193
           RSFS GLPVVKP W+LDS+ ANKLLNW PYQL+QL    + QPKLSAFF  K++   E  
Sbjct: 150 RSFSGGLPVVKPEWILDSIVANKLLNWFPYQLNQLA---NNQPKLSAFFTLKSNPVPENV 206

Query: 192 KTPN-CDVNLEDGFLPKSAASQEAPSCEVGESIDYSPEFNE---------EMPISSQGKF 43
            T   C VNL+   + K   +++    EV E + ++ +  E         E    S GK 
Sbjct: 207 LTDEVCQVNLDP--ILKGGTTKDVYISEVDEPVRFAEQAGELLDDPNHQLEELNGSSGKS 264

Query: 42  CEVIKAVPTSSE 7
            EV  A   SS+
Sbjct: 265 AEVKMAEFGSSD 276


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