BLASTX nr result

ID: Cimicifuga21_contig00020732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020732
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325830.1| predicted protein [Populus trichocarpa] gi|2...    60   3e-07
ref|XP_002948268.1| TATA-box binding protein [Volvox carteri f. ...    57   3e-06
ref|XP_001691004.1| global transcription factor [Chlamydomonas r...    57   3e-06
gb|AAV53354.1| TATA-box binding protein [Volvox carteri f. nagar...    57   3e-06
ref|XP_004144066.1| PREDICTED: TATA-box-binding protein-like [Cu...    56   5e-06

>ref|XP_002325830.1| predicted protein [Populus trichocarpa]
          gi|222862705|gb|EEF00212.1| predicted protein [Populus
          trichocarpa]
          Length = 70

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 28/29 (96%), Positives = 29/29 (100%)
 Frame = -1

Query: 88 LVQYEPELFPGLIYRMKQPKIVLLIFVSG 2
          LVQYEPE+FPGLIYRMKQPKIVLLIFVSG
Sbjct: 9  LVQYEPEIFPGLIYRMKQPKIVLLIFVSG 37


>ref|XP_002948268.1| TATA-box binding protein [Volvox carteri f. nagariensis]
           gi|300266488|gb|EFJ50675.1| TATA-box binding protein
           [Volvox carteri f. nagariensis]
          Length = 338

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/30 (86%), Positives = 27/30 (90%)
 Frame = -1

Query: 91  MLVQYEPELFPGLIYRMKQPKIVLLIFVSG 2
           +   YEPELFPGLIYRMKQPKIVLLIFVSG
Sbjct: 126 LFASYEPELFPGLIYRMKQPKIVLLIFVSG 155


>ref|XP_001691004.1| global transcription factor [Chlamydomonas reinhardtii]
           gi|158279690|gb|EDP05450.1| global transcription factor
           [Chlamydomonas reinhardtii]
          Length = 325

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/30 (86%), Positives = 27/30 (90%)
 Frame = -1

Query: 91  MLVQYEPELFPGLIYRMKQPKIVLLIFVSG 2
           +   YEPELFPGLIYRMKQPKIVLLIFVSG
Sbjct: 147 LFASYEPELFPGLIYRMKQPKIVLLIFVSG 176


>gb|AAV53354.1| TATA-box binding protein [Volvox carteri f. nagariensis]
          Length = 340

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/30 (86%), Positives = 27/30 (90%)
 Frame = -1

Query: 91  MLVQYEPELFPGLIYRMKQPKIVLLIFVSG 2
           +   YEPELFPGLIYRMKQPKIVLLIFVSG
Sbjct: 151 LFASYEPELFPGLIYRMKQPKIVLLIFVSG 180


>ref|XP_004144066.1| PREDICTED: TATA-box-binding protein-like [Cucumis sativus]
           gi|449493574|ref|XP_004159356.1| PREDICTED:
           TATA-box-binding protein-like [Cucumis sativus]
          Length = 200

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = -1

Query: 79  YEPELFPGLIYRMKQPKIVLLIFVSG 2
           YEPELFPGLIYRMKQPKIVLLIFVSG
Sbjct: 143 YEPELFPGLIYRMKQPKIVLLIFVSG 168


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