BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020720
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34928.3| unnamed protein product [Vitis vinifera]              187   2e-45
ref|XP_002278403.1| PREDICTED: protein farnesyltransferase subun...   187   2e-45
ref|XP_002517336.1| protein farnesyltransferase beta subunit, pu...   162   6e-38
sp|Q04903.1|FNTB_PEA RecName: Full=Protein farnesyltransferase s...   160   2e-37
ref|XP_003527032.1| PREDICTED: protein farnesyltransferase subun...   158   7e-37

>emb|CBI34928.3| unnamed protein product [Vitis vinifera]
          Length = 421

 Score =  187 bits (474), Expect = 2e-45
 Identities = 96/170 (56%), Positives = 125/170 (73%), Gaps = 3/170 (1%)
 Frame = -3

Query: 625 QGGVFALIQRLPSMAGKCLKLNVKEGNQTRGTTEIVGASNYCEQ---DDGSGSSRGYDER 455
           QGGVFALIQ+L S+  + L+L +  G     + ++   S +  +    D SGS+      
Sbjct: 257 QGGVFALIQKLHSIIEEQLRL-LDAGGSAIDSPQLASISCHSGKRGLHDTSGSA------ 309

Query: 454 KHADIGFSFIKRHAELGSLFDSIALQKYLLLCSQVQDGGFRDKPGKHRDYYHTCYCLSGL 275
           K ++IGF+F+K  AE+  LF SIALQ+Y++LCSQ+Q+GGFRDKPGKHRDYYHTCYCLSGL
Sbjct: 310 KFSNIGFNFLKEPAEMEPLFHSIALQQYIILCSQLQEGGFRDKPGKHRDYYHTCYCLSGL 369

Query: 274 SVSQHCWSKNAGSSPFPEAVVDQYSNLLEPIHPLYNVVLDRYYEAHDYFS 125
           SV+Q+ +SK+A S P P AV   YSNLLEPIHPLYNV+LD Y+EAH++FS
Sbjct: 370 SVAQYSYSKDADSPPLPRAVFGPYSNLLEPIHPLYNVILDLYHEAHEFFS 419


>ref|XP_002278403.1| PREDICTED: protein farnesyltransferase subunit beta-like isoform 1
           [Vitis vinifera]
          Length = 438

 Score =  187 bits (474), Expect = 2e-45
 Identities = 96/170 (56%), Positives = 125/170 (73%), Gaps = 3/170 (1%)
 Frame = -3

Query: 625 QGGVFALIQRLPSMAGKCLKLNVKEGNQTRGTTEIVGASNYCEQ---DDGSGSSRGYDER 455
           QGGVFALIQ+L S+  + L+L +  G     + ++   S +  +    D SGS+      
Sbjct: 274 QGGVFALIQKLHSIIEEQLRL-LDAGGSAIDSPQLASISCHSGKRGLHDTSGSA------ 326

Query: 454 KHADIGFSFIKRHAELGSLFDSIALQKYLLLCSQVQDGGFRDKPGKHRDYYHTCYCLSGL 275
           K ++IGF+F+K  AE+  LF SIALQ+Y++LCSQ+Q+GGFRDKPGKHRDYYHTCYCLSGL
Sbjct: 327 KFSNIGFNFLKEPAEMEPLFHSIALQQYIILCSQLQEGGFRDKPGKHRDYYHTCYCLSGL 386

Query: 274 SVSQHCWSKNAGSSPFPEAVVDQYSNLLEPIHPLYNVVLDRYYEAHDYFS 125
           SV+Q+ +SK+A S P P AV   YSNLLEPIHPLYNV+LD Y+EAH++FS
Sbjct: 387 SVAQYSYSKDADSPPLPRAVFGPYSNLLEPIHPLYNVILDLYHEAHEFFS 436


>ref|XP_002517336.1| protein farnesyltransferase beta subunit, putative [Ricinus
           communis] gi|223543347|gb|EEF44878.1| protein
           farnesyltransferase beta subunit, putative [Ricinus
           communis]
          Length = 438

 Score =  162 bits (409), Expect = 6e-38
 Identities = 88/168 (52%), Positives = 106/168 (63%), Gaps = 1/168 (0%)
 Frame = -3

Query: 625 QGGVFALIQRLPSMAGKCLKLNVKEGNQTRGTTEIVGASNYCEQDDGS-GSSRGYDERKH 449
           QGGVFAL+QRL S+ G+    +  E            A+    +D+G+ G S   DE  H
Sbjct: 278 QGGVFALLQRLRSIGGEHAAFSDAEAGHC--------ATESSSEDEGTDGDSTDVDEPGH 329

Query: 448 ADIGFSFIKRHAELGSLFDSIALQKYLLLCSQVQDGGFRDKPGKHRDYYHTCYCLSGLSV 269
              G      H     LF S ALQ+Y++LCSQ Q+GGFRDKPGK RDYYHTCYCLSGLSV
Sbjct: 330 FKQG-----GHGVTVPLFHSSALQQYIILCSQEQEGGFRDKPGKARDYYHTCYCLSGLSV 384

Query: 268 SQHCWSKNAGSSPFPEAVVDQYSNLLEPIHPLYNVVLDRYYEAHDYFS 125
            Q+ WSK+  S P P AV+  YSNLLEPIHPLYNVV  +Y  AH++FS
Sbjct: 385 CQYSWSKDENSPPLPRAVLGPYSNLLEPIHPLYNVVSKQYDGAHEFFS 432


>sp|Q04903.1|FNTB_PEA RecName: Full=Protein farnesyltransferase subunit beta;
           Short=FTase-beta; AltName: Full=CAAX farnesyltransferase
           subunit beta; AltName: Full=Ras proteins
           prenyltransferase subunit beta gi|169049|gb|AAA33649.1|
           farnesyl-protein transferase beta-subunit [Pisum
           sativum]
          Length = 419

 Score =  160 bits (405), Expect = 2e-37
 Identities = 89/180 (49%), Positives = 113/180 (62%), Gaps = 13/180 (7%)
 Frame = -3

Query: 625 QGGVFALIQRLPSMAGKCLKLNVKEGNQTRGTTEIVGASNYCEQD---DGSGSS------ 473
           QGG  AL+QRL S+  +          Q    ++ V  S+  E+    DG+ S       
Sbjct: 248 QGGAVALLQRLHSIIDE----------QMAEASQFVTVSDAPEEKECLDGTSSHATSHIR 297

Query: 472 -RGYDERKHAD---IGFSFIKRHAELGSLFDSIALQKYLLLCSQVQDGGFRDKPGKHRDY 305
             G +E   +D   IG++FI    +   LF SIALQ+Y+LLCSQ QDGG RDKPGK RD+
Sbjct: 298 HEGMNESCSSDVKNIGYNFISEWRQSEPLFHSIALQQYILLCSQEQDGGLRDKPGKRRDH 357

Query: 304 YHTCYCLSGLSVSQHCWSKNAGSSPFPEAVVDQYSNLLEPIHPLYNVVLDRYYEAHDYFS 125
           YH+CYCLSGLS+ Q+ WSK   S P P+ V+  YSNLLEPIHPL+NVVLDRY EAH++FS
Sbjct: 358 YHSCYCLSGLSLCQYSWSKRPDSPPLPKVVMGPYSNLLEPIHPLFNVVLDRYREAHEFFS 417


>ref|XP_003527032.1| PREDICTED: protein farnesyltransferase subunit beta-like [Glycine
           max]
          Length = 455

 Score =  158 bits (400), Expect = 7e-37
 Identities = 83/173 (47%), Positives = 107/173 (61%), Gaps = 7/173 (4%)
 Frame = -3

Query: 625 QGGVFALIQRLPSMAGKCLKLNVKEGNQTRGTTEIVGASNYCEQDDGSGSSRGYDE---- 458
           QGG  AL+QRL S+  K     ++E +QT   +++  A    +      +  G  E    
Sbjct: 283 QGGAVALLQRLSSIINK----QMEEASQTFTISDVSEAKESLDGTSSHATCHGKHEGTSQ 338

Query: 457 ---RKHADIGFSFIKRHAELGSLFDSIALQKYLLLCSQVQDGGFRDKPGKHRDYYHTCYC 287
                +  IG++FI        LF SIALQ+Y+LLC+Q Q GG RDKPGK RD+YHTCYC
Sbjct: 339 SCSADYKSIGYNFINEWRAQEPLFHSIALQQYILLCAQEQAGGLRDKPGKRRDHYHTCYC 398

Query: 286 LSGLSVSQHCWSKNAGSSPFPEAVVDQYSNLLEPIHPLYNVVLDRYYEAHDYF 128
           LSGLS+ Q+ WSK+  S P P  V+  YSNLLEPIHPL+NVVL+RY EAH +F
Sbjct: 399 LSGLSLCQYSWSKHPDSPPLPNLVLGPYSNLLEPIHPLFNVVLERYREAHVFF 451