BLASTX nr result

ID: Cimicifuga21_contig00020719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020719
         (938 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269610.2| PREDICTED: cellulose synthase A catalytic su...   329   5e-88
ref|XP_002522238.1| wd40 protein, putative [Ricinus communis] gi...   307   3e-81
emb|CBI30713.3| unnamed protein product [Vitis vinifera]              304   2e-80
gb|AFV94635.1| WD40-containing protein [Malus x domestica]            299   6e-79
ref|XP_004161207.1| PREDICTED: LOW QUALITY PROTEIN: cellulose sy...   284   2e-74

>ref|XP_002269610.2| PREDICTED: cellulose synthase A catalytic subunit 8 [UDP-forming]
           [Vitis vinifera]
          Length = 1360

 Score =  329 bits (844), Expect = 5e-88
 Identities = 156/224 (69%), Positives = 196/224 (87%), Gaps = 3/224 (1%)
 Frame = -3

Query: 936 ICSSVQFLPWRPWEVITGGLDAKLIMWDFSKGKPCKIMDFGLPDMESHSNGGQCFNPAFI 757
           ICSSV+FLPWRPWEVITGGLD+KL+MWDFSKG+P KI+DFG+PDME+ S+ GQC NPAF+
Sbjct: 144 ICSSVKFLPWRPWEVITGGLDSKLVMWDFSKGRPYKIVDFGMPDMENSSSAGQCLNPAFV 203

Query: 756 HAVAIPDVDMLDRSGKVCAVARGDGVVDVIDIESELASLKPKSSIRPQKGSQSRTGNTKT 577
           HA+A+P+VDML++SGK+C VARGDGVVDVI+IESELA+ + K+S +PQ+GS+SR+  +K 
Sbjct: 204 HAIAVPEVDMLEKSGKICVVARGDGVVDVINIESELAAAQSKTSSKPQRGSKSRS-KSKG 262

Query: 576 SASSI--TPDQKKGKRLHLDNSLGGHTAAVSCVSFSLFGERGKYIVSGGNDASVKIWDLS 403
           S S++  T +Q   +RLHLD SLGGHTA+VSCV+F+LFGERGK I+SGGND +VK+WD S
Sbjct: 263 SVSTVAETLNQNGRRRLHLDYSLGGHTASVSCVAFALFGERGKSIISGGNDKTVKVWDCS 322

Query: 402 KQVDAEEKRSS-DLLHQNINLSKKVNWLCTTPSDSENLVVCDTS 274
           + +DA +  SS D+LH NINLSKKVNWLCTTP+DSENLVVCDT+
Sbjct: 323 RYLDAGQPSSSNDVLHLNINLSKKVNWLCTTPADSENLVVCDTT 366


>ref|XP_002522238.1| wd40 protein, putative [Ricinus communis]
           gi|223538491|gb|EEF40096.1| wd40 protein, putative
           [Ricinus communis]
          Length = 1458

 Score =  307 bits (786), Expect = 3e-81
 Identities = 145/222 (65%), Positives = 181/222 (81%), Gaps = 1/222 (0%)
 Frame = -3

Query: 936 ICSSVQFLPWRPWEVITGGLDAKLIMWDFSKGKPCKIMDFGLPDMESHSNGGQCFNPAFI 757
           ICSSVQF+PWRPW VITGGLD+KL+MWDFSKG+P KI+DFGLP+M+  SN  QC NPAF+
Sbjct: 144 ICSSVQFIPWRPWGVITGGLDSKLVMWDFSKGRPTKIVDFGLPEMKD-SNTTQCVNPAFV 202

Query: 756 HAVAIPDVDMLDRSGKVCAVARGDGVVDVIDIESELASLKPKSSIRPQKGSQSRTGNTKT 577
           HA+A+PD DMLD+SGK+C VARGDG+VDVI+IESELA+++ K + + +KGSQS + ++ T
Sbjct: 203 HAIAVPDADMLDKSGKICVVARGDGIVDVINIESELAAVRTKITTKARKGSQSTSKDSNT 262

Query: 576 SASSITPDQKKGKRLHLDNSLGGHTAAVSCVSFSLFGERGKYIVSGGNDASVKIWDLSKQ 397
           +A +      +   LH D SLGGH AA SCV+FSLFGERGK+I+SGGND SVK+WD S+ 
Sbjct: 263 TAGT------QSSMLHFDYSLGGHVAAASCVAFSLFGERGKFIISGGNDKSVKVWDCSRY 316

Query: 396 VDAEEKRS-SDLLHQNINLSKKVNWLCTTPSDSENLVVCDTS 274
            D     S +D+LH NIN+SKKVNWLCTTPS+SENLVVCDT+
Sbjct: 317 PDVGPSNSNNDILHLNINMSKKVNWLCTTPSESENLVVCDTT 358


>emb|CBI30713.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  304 bits (778), Expect = 2e-80
 Identities = 146/222 (65%), Positives = 178/222 (80%), Gaps = 1/222 (0%)
 Frame = -3

Query: 936 ICSSVQFLPWRPWEVITGGLDAKLIMWDFSKGKPCKIMDFGLPDMESHSNGGQCFNPAFI 757
           ICSSV+FLPWRPWEVITGGLD+KL+MWDFSKG+P KI+DFG+PDME+ S+ GQC NPAF+
Sbjct: 144 ICSSVKFLPWRPWEVITGGLDSKLVMWDFSKGRPYKIVDFGMPDMENSSSAGQCLNPAFV 203

Query: 756 HAVAIPDVDMLDRSGKVCAVARGDGVVDVIDIESELASLKPKSSIRPQKGSQSRTGNTKT 577
           HA+A+P+VDML++SGK+C VARGDGVVDVI+IESELA+                      
Sbjct: 204 HAIAVPEVDMLEKSGKICVVARGDGVVDVINIESELAA-------------------AHV 244

Query: 576 SASSITPDQKKGKRLHLDNSLGGHTAAVSCVSFSLFGERGKYIVSGGNDASVKIWDLSKQ 397
           S  + T +Q   +RLHLD SLGGHTA+VSCV+F+LFGERGK I+SGGND +VK+WD S+ 
Sbjct: 245 STVAETLNQNGRRRLHLDYSLGGHTASVSCVAFALFGERGKSIISGGNDKTVKVWDCSRY 304

Query: 396 VDAEEKRSS-DLLHQNINLSKKVNWLCTTPSDSENLVVCDTS 274
           +DA +  SS D+LH NINLSKKVNWLCTTP+DSENLVVCDT+
Sbjct: 305 LDAGQPSSSNDVLHLNINLSKKVNWLCTTPADSENLVVCDTT 346


>gb|AFV94635.1| WD40-containing protein [Malus x domestica]
          Length = 371

 Score =  299 bits (766), Expect = 6e-79
 Identities = 144/221 (65%), Positives = 177/221 (80%)
 Frame = -3

Query: 936 ICSSVQFLPWRPWEVITGGLDAKLIMWDFSKGKPCKIMDFGLPDMESHSNGGQCFNPAFI 757
           ICS+ QFLPW+PWEVITGGLD+KL+MWDFSKG+P KIM+  LPD  +     QCFNPAF+
Sbjct: 148 ICSTAQFLPWKPWEVITGGLDSKLVMWDFSKGRPNKIMNVDLPDANNGKAKEQCFNPAFV 207

Query: 756 HAVAIPDVDMLDRSGKVCAVARGDGVVDVIDIESELASLKPKSSIRPQKGSQSRTGNTKT 577
           H++A+P++DMLD+S KVC VARGDG VDVI+IE+ELA L+ + S +PQKGSQSR+  T  
Sbjct: 208 HSIAVPEMDMLDKSDKVCIVARGDGAVDVINIEAELAPLRSQGSKKPQKGSQSRSKGTDL 267

Query: 576 SASSITPDQKKGKRLHLDNSLGGHTAAVSCVSFSLFGERGKYIVSGGNDASVKIWDLSKQ 397
                 PD++  KRLHLD   GGHTAAVSCV+FSLFG+RG++I+SGGND  VK+WD +K 
Sbjct: 268 E----NPDREGRKRLHLDYLSGGHTAAVSCVAFSLFGDRGRFIISGGNDKLVKVWDWTKC 323

Query: 396 VDAEEKRSSDLLHQNINLSKKVNWLCTTPSDSENLVVCDTS 274
           +D  E  SSDLL  NIN SKKVNWLCTTP+D+ENLVVCDT+
Sbjct: 324 LD--EGSSSDLLQLNINHSKKVNWLCTTPADTENLVVCDTT 362


>ref|XP_004161207.1| PREDICTED: LOW QUALITY PROTEIN: cellulose synthase A catalytic
           subunit 8 [UDP-forming]-like [Cucumis sativus]
          Length = 1390

 Score =  284 bits (727), Expect = 2e-74
 Identities = 136/223 (60%), Positives = 174/223 (78%), Gaps = 2/223 (0%)
 Frame = -3

Query: 936 ICSSVQFLPWRPWEVITGGLDAKLIMWDFSKGKPCKIMDFGLPDMESHSNGGQCFNPAFI 757
           ICSSVQFLPWRPWEVITGGLD+KLIMWDFS+G+P + +DF +PD    S+ GQCFNPAFI
Sbjct: 146 ICSSVQFLPWRPWEVITGGLDSKLIMWDFSRGRPIQALDFDIPDNHPSSSTGQCFNPAFI 205

Query: 756 HAVAIPDVDMLDRSGKVCAVARGDGVVDVIDIESELASLKPKSSIRPQKGSQSRTGNTKT 577
           HA+A+P+V+MLDR G++C VARGDG+V VIDIESE    K K+S +  K  Q+R+     
Sbjct: 206 HAIAVPEVNMLDRLGQICVVARGDGIVHVIDIESE----KSKTSSKTGKKVQTRSKGVTA 261

Query: 576 SASSITPDQKKGKRLHLDNSLGGHTAAVSCVSFSLFGERGKYIVSGGNDASVKIWDLSKQ 397
           +      +Q   K+L+LD ++GGH+AAVSCV+FS FGE+GK+IVSGGND  +K+W+  + 
Sbjct: 262 ACDMNNQEQTGRKKLYLDYTVGGHSAAVSCVAFSQFGEKGKFIVSGGNDKCIKLWNWCEV 321

Query: 396 VDAEEKRSS--DLLHQNINLSKKVNWLCTTPSDSENLVVCDTS 274
            DA +  SS  ++LH NINLSKKVNWLCTTPS++ENL+VCDTS
Sbjct: 322 PDAGKTSSSNNEVLHLNINLSKKVNWLCTTPSETENLIVCDTS 364


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