BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020711
         (1044 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264418.1| PREDICTED: nifU-like protein 2, chloroplasti...   303   5e-80
ref|XP_002328771.1| predicted protein [Populus trichocarpa] gi|2...   298   1e-78
ref|XP_002529001.1| Nitrogen fixation protein nifU, putative [Ri...   291   2e-76
ref|XP_004161945.1| PREDICTED: nifU-like protein 2, chloroplasti...   280   4e-73
ref|XP_004135350.1| PREDICTED: nifU-like protein 2, chloroplasti...   280   4e-73

>ref|XP_002264418.1| PREDICTED: nifU-like protein 2, chloroplastic [Vitis vinifera]
           gi|297739542|emb|CBI29724.3| unnamed protein product
           [Vitis vinifera]
          Length = 227

 Score =  303 bits (776), Expect = 5e-80
 Identities = 168/235 (71%), Positives = 183/235 (77%)
 Frame = -2

Query: 968 VAMNPPCSCSAQRTLEASCSGALLTLHPSFKNLGFNRTKISLRGSTSQLQKSPVVFFTLA 789
           V  NP   C A+  LE S S +     PSF   G   + +  R S+  L+          
Sbjct: 5   VVANPSYCCRAKHALEPSSSSSSPIKIPSFFTRG---SDLRRRASSRSLR---------I 52

Query: 788 KNTLQNRQQVVKAVATPDSLVELPLTAENVESVLDEVRPYLMSDGGNVALHEIDGNVVRL 609
           +N ++ R +VVKAVATPDS VELPLTAENVESVLDE+RPYL+SDGGNVALHEIDGNVVRL
Sbjct: 53  RNPIRTRSRVVKAVATPDSAVELPLTAENVESVLDEIRPYLISDGGNVALHEIDGNVVRL 112

Query: 608 KLQGACGSCPSSVTTMKLGIERRLMEKIPEIVAVEPITDEETGLELNEENIEQVLGEIRP 429
           KLQGACGSCPSSV TMK+GIERRLMEKIPEIVAVEPI DEETGLELNEENIE+VL EIRP
Sbjct: 113 KLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRP 172

Query: 428 YLVXXXXXGLELVAIDEPIVKVRISGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 264
           YLV      LELV IDEPIVKVRI+GPAAGVMTVRVAVTQKLREKIPAIAAVQLL
Sbjct: 173 YLVGAAGGSLELVGIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 227


>ref|XP_002328771.1| predicted protein [Populus trichocarpa] gi|222839069|gb|EEE77420.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  298 bits (764), Expect = 1e-78
 Identities = 170/239 (71%), Positives = 188/239 (78%), Gaps = 1/239 (0%)
 Frame = -2

Query: 977 MQSVAMNPPCSCSAQRTLEASCSGALLTLHPSFKNLGFNRTKISLRGSTSQLQK-SPVVF 801
           MQSV  NP   CSAQ+TL+ SCS  L  LH      GF    +    S +QL++ +P   
Sbjct: 1   MQSVVWNPT-HCSAQQTLDTSCSSPLPLLHHKSCK-GFFGAHVR---SANQLRRGTPCHS 55

Query: 800 FTLAKNTLQNRQQVVKAVATPDSLVELPLTAENVESVLDEVRPYLMSDGGNVALHEIDGN 621
                 +   R+ VVKAVATPDS VELPLTA+NVESVLDEVRPYL+SDGGNVALHEIDGN
Sbjct: 56  LRARLPSFTQRRLVVKAVATPDSAVELPLTADNVESVLDEVRPYLISDGGNVALHEIDGN 115

Query: 620 VVRLKLQGACGSCPSSVTTMKLGIERRLMEKIPEIVAVEPITDEETGLELNEENIEQVLG 441
           VVRLKLQGAC SC +SVTTMK+GIERRLMEKIPEIVAVE I+DEETGLEL EENIE+VL 
Sbjct: 116 VVRLKLQGACSSCSASVTTMKMGIERRLMEKIPEIVAVEAISDEETGLELKEENIEKVLE 175

Query: 440 EIRPYLVXXXXXGLELVAIDEPIVKVRISGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 264
           EIRPYLV      LELVAI+EPIVK+RI+GPAAGVMTVRVAVTQKLREKIPAIAAVQLL
Sbjct: 176 EIRPYLVGAAGGSLELVAIEEPIVKIRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 234


>ref|XP_002529001.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
           gi|223531541|gb|EEF33371.1| Nitrogen fixation protein
           nifU, putative [Ricinus communis]
          Length = 226

 Score =  291 bits (744), Expect = 2e-76
 Identities = 162/238 (68%), Positives = 187/238 (78%)
 Frame = -2

Query: 977 MQSVAMNPPCSCSAQRTLEASCSGALLTLHPSFKNLGFNRTKISLRGSTSQLQKSPVVFF 798
           MQ+V +NP  S   Q TL+++ S +       FK+      ++SL    + L++ P    
Sbjct: 1   MQAVVINPTYSRPHQ-TLDSAPSSSR-----PFKSSSLFSARVSLNRGRNHLRRIP---- 50

Query: 797 TLAKNTLQNRQQVVKAVATPDSLVELPLTAENVESVLDEVRPYLMSDGGNVALHEIDGNV 618
              ++    R+ VV+AVATP+S +ELPLTAENVESVLDEVRPYL++DGGNVALHEIDGNV
Sbjct: 51  --CRSVRLTRRLVVRAVATPNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNV 108

Query: 617 VRLKLQGACGSCPSSVTTMKLGIERRLMEKIPEIVAVEPITDEETGLELNEENIEQVLGE 438
           VRLKLQGACGSCPSSV TMK+GIERRLMEKIPEIVAVEPI DEETGLELNEENIE+VL E
Sbjct: 109 VRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEE 168

Query: 437 IRPYLVXXXXXGLELVAIDEPIVKVRISGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 264
           IRPYLV      LELVAI+EPI K+RI+GPAAGVMTVRVAVTQKLREKIPAIAAVQLL
Sbjct: 169 IRPYLVGAAGGSLELVAIEEPIAKIRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 226


>ref|XP_004161945.1| PREDICTED: nifU-like protein 2, chloroplastic-like [Cucumis
           sativus]
          Length = 216

 Score =  280 bits (716), Expect = 4e-73
 Identities = 144/170 (84%), Positives = 157/170 (92%)
 Frame = -2

Query: 773 NRQQVVKAVATPDSLVELPLTAENVESVLDEVRPYLMSDGGNVALHEIDGNVVRLKLQGA 594
           +R + ++AVATP+S +ELPLT ENVESVLDEVRPYL++DGGNVALHEIDGNVVRLKLQGA
Sbjct: 46  SRTRFIRAVATPNSALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGA 105

Query: 593 CGSCPSSVTTMKLGIERRLMEKIPEIVAVEPITDEETGLELNEENIEQVLGEIRPYLVXX 414
           CGSCPSSVTTMK+GIERRLMEKIPEIVAVEPI DEETGLELNEENIE+VL EIRPYLV  
Sbjct: 106 CGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYLVGA 165

Query: 413 XXXGLELVAIDEPIVKVRISGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 264
               LELV I+EPIVKVRI+GPAAGVMTVRVAVTQKLREKIP+IAAVQLL
Sbjct: 166 AGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLL 215



 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
 Frame = -2

Query: 863 NRTKISLRGSTSQLQKSPVVF-FTLAKNTLQNRQQVVKAVATPDSLVELPLTAENVESVL 687
           N  ++ L+G+      S       + +  ++   ++V      D    L L  EN+E VL
Sbjct: 96  NVVRLKLQGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVL 155

Query: 686 DEVRPYLM-SDGGNVALHEIDGNVVRLKLQGACGSCPSSVTTMKLGIERRLMEKIPEIVA 510
           +E+RPYL+ + GG++ L  I+  +V++++ G      + V T+++ + ++L EKIP I A
Sbjct: 156 EEIRPYLVGAAGGSLELVGIEEPIVKVRITGPA----AGVMTVRVAVTQKLREKIPSIAA 211

Query: 509 VE 504
           V+
Sbjct: 212 VQ 213


>ref|XP_004135350.1| PREDICTED: nifU-like protein 2, chloroplastic-like [Cucumis
           sativus]
          Length = 228

 Score =  280 bits (716), Expect = 4e-73
 Identities = 144/170 (84%), Positives = 157/170 (92%)
 Frame = -2

Query: 773 NRQQVVKAVATPDSLVELPLTAENVESVLDEVRPYLMSDGGNVALHEIDGNVVRLKLQGA 594
           +R + ++AVATP+S +ELPLT ENVESVLDEVRPYL++DGGNVALHEIDGNVVRLKLQGA
Sbjct: 58  SRTRFIRAVATPNSALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGA 117

Query: 593 CGSCPSSVTTMKLGIERRLMEKIPEIVAVEPITDEETGLELNEENIEQVLGEIRPYLVXX 414
           CGSCPSSVTTMK+GIERRLMEKIPEIVAVEPI DEETGLELNEENIE+VL EIRPYLV  
Sbjct: 118 CGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYLVGA 177

Query: 413 XXXGLELVAIDEPIVKVRISGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 264
               LELV I+EPIVKVRI+GPAAGVMTVRVAVTQKLREKIP+IAAVQLL
Sbjct: 178 AGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLL 227



 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
 Frame = -2

Query: 863 NRTKISLRGSTSQLQKSPVVF-FTLAKNTLQNRQQVVKAVATPDSLVELPLTAENVESVL 687
           N  ++ L+G+      S       + +  ++   ++V      D    L L  EN+E VL
Sbjct: 108 NVVRLKLQGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVL 167

Query: 686 DEVRPYLM-SDGGNVALHEIDGNVVRLKLQGACGSCPSSVTTMKLGIERRLMEKIPEIVA 510
           +E+RPYL+ + GG++ L  I+  +V++++ G      + V T+++ + ++L EKIP I A
Sbjct: 168 EEIRPYLVGAAGGSLELVGIEEPIVKVRITGPA----AGVMTVRVAVTQKLREKIPSIAA 223

Query: 509 VE 504
           V+
Sbjct: 224 VQ 225