BLASTX nr result

ID: Cimicifuga21_contig00020708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020708
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282016.2| PREDICTED: uncharacterized protein LOC100262...   134   2e-29
emb|CBI20954.3| unnamed protein product [Vitis vinifera]              117   2e-24
ref|XP_002516594.1| zinc finger protein, putative [Ricinus commu...   114   1e-23
ref|XP_002308627.1| predicted protein [Populus trichocarpa] gi|2...   112   5e-23
ref|XP_003526444.1| PREDICTED: uncharacterized protein LOC100813...   106   4e-21

>ref|XP_002282016.2| PREDICTED: uncharacterized protein LOC100262933 [Vitis vinifera]
          Length = 2871

 Score =  134 bits (336), Expect = 2e-29
 Identities = 78/199 (39%), Positives = 118/199 (59%), Gaps = 7/199 (3%)
 Frame = +2

Query: 2   LLMQLVSSRVSENIRRLVDLENIDKEDFTGSSESFDYLPEDFVNLKGSNSEFVDSVNILD 181
           LL+  VSSRVSE+ R+++DL++I+K+      ES   L E    L+ ++   VD V +LD
Sbjct: 101 LLVHTVSSRVSESARKVIDLDSIEKDGLNEGFESRADLLEQREELRDTSDGLVDLVPVLD 160

Query: 182 RISELGLWRLRRNTFKNDVESLD------VIKDEELKCLTKLFLEQSEIFDALCCNIQKQ 343
           RI++LGL RL+ +   +D   ++      + ++ E   L  + LE  EIFDALC NIQ+Q
Sbjct: 161 RIADLGLRRLKPDVGVSDGSGINANQGDTIFEETEFMGLRNVVLEFPEIFDALCWNIQRQ 220

Query: 344 VHWLDREESGLAITV-HXXXXXXXXXXXXLNILKTILKNVQIAHLEASKEFVKENDINGA 520
             W +   +GLAIT+ +               L  IL++VQI HL+A KE +++ D++ A
Sbjct: 221 FQWTEGSNTGLAITIRNEEKGMVDLEEGDARFLGLILRSVQITHLDAMKESMEKGDVDRA 280

Query: 521 ISHLRFLHLDYGVVETEYR 577
           ISH+++LH D GV E EYR
Sbjct: 281 ISHIQYLHFDCGVAEDEYR 299


>emb|CBI20954.3| unnamed protein product [Vitis vinifera]
          Length = 2483

 Score =  117 bits (293), Expect = 2e-24
 Identities = 74/209 (35%), Positives = 111/209 (53%), Gaps = 7/209 (3%)
 Frame = +2

Query: 2   LLMQLVSSRVSENIRRLVDLENIDKEDFTGSSESFDYLPEDFVNLKGSNSEFVDSVNILD 181
           LL+  VSSRVSE+ R+  +L +                         ++   VD V +LD
Sbjct: 101 LLVHTVSSRVSESARKREELRD-------------------------TSDGLVDLVPVLD 135

Query: 182 RISELGLWRLRRNTFKNDVESLD------VIKDEELKCLTKLFLEQSEIFDALCCNIQKQ 343
           RI++LGL RL+ +   +D   ++      + ++ E   L  + LE  EIFDALC NIQ+Q
Sbjct: 136 RIADLGLRRLKPDVGVSDGSGINANQGDTIFEETEFMGLRNVVLEFPEIFDALCWNIQRQ 195

Query: 344 VHWLDREESGLAITV-HXXXXXXXXXXXXLNILKTILKNVQIAHLEASKEFVKENDINGA 520
             W +   +GLAIT+ +               L  IL++VQI HL+A KE +++ D++ A
Sbjct: 196 FQWTEGSNTGLAITIRNEEKGMVDLEEGDARFLGLILRSVQITHLDAMKESMEKGDVDRA 255

Query: 521 ISHLRFLHLDYGVVETEYRMALQDLIKKI 607
           ISH+++LH D GV E EYR  LQ L+K +
Sbjct: 256 ISHIQYLHFDCGVAEDEYRAGLQQLLKSV 284


>ref|XP_002516594.1| zinc finger protein, putative [Ricinus communis]
           gi|223544414|gb|EEF45935.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 2515

 Score =  114 bits (286), Expect = 1e-23
 Identities = 75/202 (37%), Positives = 117/202 (57%), Gaps = 3/202 (1%)
 Frame = +2

Query: 2   LLMQLVSSRVSENIRRLVDLENIDKE---DFTGSSESFDYLPEDFVNLKGSNSEFVDSVN 172
           LL+Q++   V+E +R+ VDLE+I++E   D     +  + L     +LK  + E  +S+ 
Sbjct: 113 LLIQMLCDVVTEGMRKNVDLESIEREKENDDFSERDREELLNRRSEDLKDVSGELGESLR 172

Query: 173 ILDRISELGLWRLRRNTFKNDVESLDVIKDEELKCLTKLFLEQSEIFDALCCNIQKQVHW 352
           ILD+  ELG+ RL+ +T    V+S+D + +EE K +    +E+ EI   +C   Q+    
Sbjct: 173 ILDKFLELGIKRLKPDTL---VDSIDAVANEEKKSVC--LIEEIEI---MCLRRQQLKGD 224

Query: 353 LDREESGLAITVHXXXXXXXXXXXXLNILKTILKNVQIAHLEASKEFVKENDINGAISHL 532
            + + SGLAITV             + +L  I ++VQ+AHL A KE ++  D +GA+SH+
Sbjct: 225 DEVDSSGLAITVRTDEKMHMEEVEEVKVLNLIQRSVQLAHLVAMKECLEGGDEDGAVSHI 284

Query: 533 RFLHLDYGVVETEYRMALQDLI 598
           R+LHLD GV E EYR  LQDL+
Sbjct: 285 RYLHLDRGVEEAEYRTVLQDLL 306


>ref|XP_002308627.1| predicted protein [Populus trichocarpa] gi|222854603|gb|EEE92150.1|
           predicted protein [Populus trichocarpa]
          Length = 2467

 Score =  112 bits (280), Expect = 5e-23
 Identities = 73/217 (33%), Positives = 121/217 (55%), Gaps = 15/217 (6%)
 Frame = +2

Query: 2   LLMQLVSSRVSENIRRLVDLENIDKEDFTGSSESFDYLPEDFVNLKGSNSEFVDSVNILD 181
           LL+QL+  RV+E++R+ VDL+   +E+     E  +   ++F  LK  + E    + +LD
Sbjct: 102 LLIQLLIDRVTESLRKNVDLDRGAEEE----EEEEEGFLDNFEGLKDGSGE----LEVLD 153

Query: 182 RISELGLWRLRRNTFKNDVE-------------SLDVIKDEELKCLTKLFLEQSEIFDAL 322
           ++ E G+ RL+ +   +  E              +  I++ E+ CL K+ L+ +++FDAL
Sbjct: 154 KVLEFGVKRLKGDVDLDGNEVGGSGRGEGSSSGGVVAIEEGEMMCLRKVILDNADVFDAL 213

Query: 323 CCNIQKQVHWL--DREESGLAITVHXXXXXXXXXXXXLNILKTILKNVQIAHLEASKEFV 496
           C N++ Q+  +  + E SG+ ITV             + +   I K VQ+AH++A KE  
Sbjct: 214 CWNVESQMKGMKVENENSGMEITVRGEESEKVEEEG-VELFDLIRKCVQLAHVDAMKECS 272

Query: 497 KENDINGAISHLRFLHLDYGVVETEYRMALQDLIKKI 607
           KE D  G  SH+RFLHLD G+ E+EYR+ LQDL+ ++
Sbjct: 273 KEGD-EGVFSHIRFLHLDRGLEESEYRIVLQDLLVRV 308


>ref|XP_003526444.1| PREDICTED: uncharacterized protein LOC100813647 [Glycine max]
          Length = 2475

 Score =  106 bits (264), Expect = 4e-21
 Identities = 64/192 (33%), Positives = 109/192 (56%), Gaps = 11/192 (5%)
 Frame = +2

Query: 65  NIDKEDFTGSSESFDYLPEDFVNLKGS-NSEFVDSVNILDRISELGLWRLRRNTF-KNDV 238
           N D+E     +E F  L +D ++L    + E+ +  ++LDR+ ELG+ RLR +   +N++
Sbjct: 87  NFDEETLRLRAE-FLLLVQDLIDLVSECDGEWGNCRSVLDRVLELGVKRLRVDADGENEI 145

Query: 239 ESLD--------VIKDEELKCLTKLFLEQSEIFDALCCNIQKQVHWLDREESGLAITVHX 394
           + +         V+++ E   L KL LE + +FDALC N+ +Q+   + E+SG       
Sbjct: 146 DGIGSGNGNAATVVEEAEFTSLRKLILEHARVFDALCVNVHRQIRHWESEDSG------- 198

Query: 395 XXXXXXXXXXXLNILKTILKNVQIAHLEASKEFVKENDINGAISHLRFLHLDYGVVE-TE 571
                      + +L+ I + VQ+ HL+A +E ++  D  GA+SH+RFLH DYG+ E +E
Sbjct: 199 -EGSEELEEEDVKVLRGIQRTVQVVHLDAMRESLESGDAEGAVSHIRFLHFDYGIEEQSE 257

Query: 572 YRMALQDLIKKI 607
           YR+ L+DL+K +
Sbjct: 258 YRIVLKDLLKVV 269


Top