BLASTX nr result

ID: Cimicifuga21_contig00020707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020707
         (1093 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280371.1| PREDICTED: poly(ADP-ribose) glycohydrolase 1...   335   9e-90
emb|CAN75808.1| hypothetical protein VITISV_004629 [Vitis vinifera]   327   2e-87
ref|XP_003537791.1| PREDICTED: poly(ADP-ribose) glycohydrolase 1...   313   5e-83
ref|XP_002881202.1| hypothetical protein ARALYDRAFT_482111 [Arab...   306   8e-81
ref|NP_001077989.1| Poly(ADP-ribose) glycohydrolase 1 [Arabidops...   304   2e-80

>ref|XP_002280371.1| PREDICTED: poly(ADP-ribose) glycohydrolase 1 [Vitis vinifera]
            gi|296084375|emb|CBI24763.3| unnamed protein product
            [Vitis vinifera]
          Length = 562

 Score =  335 bits (860), Expect = 9e-90
 Identities = 168/273 (61%), Positives = 204/273 (74%), Gaps = 3/273 (1%)
 Frame = -1

Query: 1093 RGCVQEEIRFMINPELIVGMLFLPSMADNEAIEIVGSERFSNYTGYASTFRFSGDYLDKK 914
            RGCVQEEIRFMINPELI GMLFLPSMADNEAIE+VG ERFSNYTGYAS+F F+GDY+DK+
Sbjct: 279  RGCVQEEIRFMINPELIAGMLFLPSMADNEAIEVVGPERFSNYTGYASSFHFAGDYVDKR 338

Query: 913  PVDCMGRRKTRIVAIDALCSPKTRQYGVECLLREINKAFCGFSDQSK-NQYQNVFQSEDM 737
             VD MGRRKT+++AIDALC  + RQY +ECLLREINKAFCGF DQSK  QYQ +F+ + +
Sbjct: 339  DVDFMGRRKTKMIAIDALCDMRMRQYRLECLLREINKAFCGFFDQSKCQQYQRLFKGDGL 398

Query: 736  CNDH--DCVRGVNYDTEMAEQLHELPSTVXXXXXXXXXXXXXXNSYDEYSKDADGKDNIG 563
            C  H    V+G +  +     L E P                 N+ ++       + +IG
Sbjct: 399  CGAHLDQGVQGPDSISWNNLLLQEAPYASVGTNEGIYGDQQIRNAEEKGGHSLGHRYDIG 458

Query: 562  IVTGNWGCGAFGGDAELKAVIQWLAASQALKPFILYYTFQEEALLYLDQVTAWILSHGWT 383
            +VTGNWGCGAFGGD ELK +IQWLAASQAL+PFI Y+TF  EAL  LD+V  WILSH WT
Sbjct: 459  VVTGNWGCGAFGGDPELKTIIQWLAASQALRPFISYHTFGVEALKTLDKVIQWILSHKWT 518

Query: 382  VGDLWNMLMEYSSQRIKGDTHSGFFSWLLPALN 284
            VGDLW+ML+EYS+QR++G+T  GFF+WLLP+L+
Sbjct: 519  VGDLWDMLVEYSTQRLRGETSLGFFTWLLPSLS 551


>emb|CAN75808.1| hypothetical protein VITISV_004629 [Vitis vinifera]
          Length = 549

 Score =  327 bits (839), Expect = 2e-87
 Identities = 164/267 (61%), Positives = 198/267 (74%), Gaps = 3/267 (1%)
 Frame = -1

Query: 1093 RGCVQEEIRFMINPELIVGMLFLPSMADNEAIEIVGSERFSNYTGYASTFRFSGDYLDKK 914
            RGCVQEEIRFMINPELI GMLFLPSMADNEAIE+VG ERFSNYTGYAS+F F+GDY+DK+
Sbjct: 249  RGCVQEEIRFMINPELIAGMLFLPSMADNEAIEVVGPERFSNYTGYASSFHFAGDYVDKR 308

Query: 913  PVDCMGRRKTRIVAIDALCSPKTRQYGVECLLREINKAFCGFSDQSK-NQYQNVFQSEDM 737
             VD MGRRKT+++AIDALC  + RQY +ECLLREINKAFCGF DQSK  QYQ +F+ + +
Sbjct: 309  DVDFMGRRKTKMIAIDALCDMRMRQYRLECLLREINKAFCGFFDQSKCQQYQRLFKGDGL 368

Query: 736  CNDH--DCVRGVNYDTEMAEQLHELPSTVXXXXXXXXXXXXXXNSYDEYSKDADGKDNIG 563
            C  H    V+G +  +     L E P                 N+ ++       + +IG
Sbjct: 369  CGAHLDQGVQGPDSISWNNLLLQEAPYASVGTNEGIYGDQQIRNAEEKGGHSLGHRYDIG 428

Query: 562  IVTGNWGCGAFGGDAELKAVIQWLAASQALKPFILYYTFQEEALLYLDQVTAWILSHGWT 383
            +VTGNWGCGAFGGD ELK +IQWLAASQAL+PFI Y+TF  EAL  LD+V  WILSH WT
Sbjct: 429  VVTGNWGCGAFGGDPELKTIIQWLAASQALRPFISYHTFGVEALKTLDKVIQWILSHKWT 488

Query: 382  VGDLWNMLMEYSSQRIKGDTHSGFFSW 302
            VGDLW+ML+EYS+QR++G+T  GFF+W
Sbjct: 489  VGDLWDMLVEYSTQRLRGETSLGFFTW 515


>ref|XP_003537791.1| PREDICTED: poly(ADP-ribose) glycohydrolase 1-like [Glycine max]
          Length = 547

 Score =  313 bits (802), Expect = 5e-83
 Identities = 165/273 (60%), Positives = 192/273 (70%), Gaps = 1/273 (0%)
 Frame = -1

Query: 1093 RGCVQEEIRFMINPELIVGMLFLPSMADNEAIEIVGSERFSNYTGYASTFRFSGDYLDKK 914
            RGCVQEEIRFM++PEL+VGMLFLP+MADNEAIEIVG ERFS+YTGYAS+FRFSGDY+D++
Sbjct: 281  RGCVQEEIRFMVSPELMVGMLFLPAMADNEAIEIVGVERFSSYTGYASSFRFSGDYVDER 340

Query: 913  PVDCMGRRKTRIVAIDALCSPKTRQYGVECLLREINKAFCGFSDQSKNQ-YQNVFQSEDM 737
             VD +GRRKTRIVAIDALCSP  RQY    LLREINKAFCGF  Q K Q YQ + Q    
Sbjct: 341  EVDTLGRRKTRIVAIDALCSPGMRQYRANFLLREINKAFCGFLYQCKYQPYQKILQ---- 396

Query: 736  CNDHDCVRGVNYDTEMAEQLHELPSTVXXXXXXXXXXXXXXNSYDEYSKDADGKDNIGIV 557
              ++ C   + Y            ST               NS ++Y    D  +NIG+ 
Sbjct: 397  --ENGCTSALFY---------AATSTSMETDEGEISNHKITNSQNDY-HGMDQGNNIGVA 444

Query: 556  TGNWGCGAFGGDAELKAVIQWLAASQALKPFILYYTFQEEALLYLDQVTAWILSHGWTVG 377
            TGNWGCGAFGGD E+K +IQWLAASQAL+PFI YYTF  EAL  LD+V  WILS  WTVG
Sbjct: 445  TGNWGCGAFGGDPEVKTIIQWLAASQALRPFIAYYTFGLEALQSLDEVAHWILSQRWTVG 504

Query: 376  DLWNMLMEYSSQRIKGDTHSGFFSWLLPALNVH 278
            DLWNML+EYS  R KG+T+ GF  WLLP++  H
Sbjct: 505  DLWNMLIEYSINRSKGETNVGFLQWLLPSIYGH 537


>ref|XP_002881202.1| hypothetical protein ARALYDRAFT_482111 [Arabidopsis lyrata subsp.
            lyrata] gi|297327041|gb|EFH57461.1| hypothetical protein
            ARALYDRAFT_482111 [Arabidopsis lyrata subsp. lyrata]
          Length = 557

 Score =  306 bits (783), Expect = 8e-81
 Identities = 165/276 (59%), Positives = 192/276 (69%), Gaps = 7/276 (2%)
 Frame = -1

Query: 1093 RGCVQEEIRFMINPELIVGMLFLPSMADNEAIEIVGSERFSNYTGYASTFRFSGDYLDKK 914
            RGCVQEEIRFMINPELI GMLFLP M DNEAIEIVG+ERFS YTGYAS+FRF+G+Y+DKK
Sbjct: 277  RGCVQEEIRFMINPELIAGMLFLPRMDDNEAIEIVGAERFSCYTGYASSFRFAGEYIDKK 336

Query: 913  PVDCMGRRKTRIVAIDALCSPKTRQYGVECLLREINKAFCGFSDQSKN-QYQNVFQSED- 740
             +D   RR+TRIVAIDALC+PK R +   CLLREINKA CGF + SK+ Q+QN+F  E  
Sbjct: 337  AMDPFKRRRTRIVAIDALCAPKMRHFKDICLLREINKALCGFLNCSKSWQHQNIFIDEGD 396

Query: 739  -----MCNDHDCVRGVNYDTEMAEQLHELPSTVXXXXXXXXXXXXXXNSYDEYSKDADGK 575
                   ND D   G+      A  LH  P                 + Y E     D +
Sbjct: 397  KEIQLARNDRD--SGLLRTETTA--LHGTPLNDVEINREKPANNLIRDFYVEGVHCEDNE 452

Query: 574  DNIGIVTGNWGCGAFGGDAELKAVIQWLAASQALKPFILYYTFQEEALLYLDQVTAWILS 395
            D+ G+ TGNWGCG FGGD ELKA IQWLAASQ  +PFI YYTF  EAL +LDQVT WI+S
Sbjct: 453  DD-GVATGNWGCGVFGGDPELKATIQWLAASQTRRPFISYYTFGVEALQHLDQVTKWIIS 511

Query: 394  HGWTVGDLWNMLMEYSSQRIKGDTHSGFFSWLLPAL 287
            H WTVGDLWNM++EYS+QR+   T+ GFFSWLLP+L
Sbjct: 512  HKWTVGDLWNMMLEYSAQRLYKQTNLGFFSWLLPSL 547


>ref|NP_001077989.1| Poly(ADP-ribose) glycohydrolase 1 [Arabidopsis thaliana]
            gi|330253504|gb|AEC08598.1| Poly(ADP-ribose)
            glycohydrolase 1 [Arabidopsis thaliana]
          Length = 547

 Score =  304 bits (779), Expect = 2e-80
 Identities = 162/272 (59%), Positives = 189/272 (69%), Gaps = 3/272 (1%)
 Frame = -1

Query: 1093 RGCVQEEIRFMINPELIVGMLFLPSMADNEAIEIVGSERFSNYTGYASTFRFSGDYLDKK 914
            RGCVQEEIRFMINPELI GMLFLP M DNEAIEIVG+ERFS YTGYAS+FRF+G+Y+DKK
Sbjct: 268  RGCVQEEIRFMINPELIAGMLFLPRMDDNEAIEIVGAERFSCYTGYASSFRFAGEYIDKK 327

Query: 913  PVDCMGRRKTRIVAIDALCSPKTRQYGVECLLREINKAFCGFSDQSKN-QYQNVFQSEDM 737
             +D   RR+TRIVAIDALC+PK R +   CLLREINKA CGF + SK  ++QN+F  E  
Sbjct: 328  AMDPFKRRRTRIVAIDALCTPKMRHFKDICLLREINKALCGFLNCSKAWEHQNIFMDEG- 386

Query: 736  CNDHDCVRGVNYDTEMAEQL--HELPSTVXXXXXXXXXXXXXXNSYDEYSKDADGKDNIG 563
             N+   VR       +  +   H  P                 + Y E   + D +D+ G
Sbjct: 387  DNEIQLVRNGRDSGLLRTETTSHRTPLNDVEMNREKPANNLIRDFYVEGVDNEDHEDD-G 445

Query: 562  IVTGNWGCGAFGGDAELKAVIQWLAASQALKPFILYYTFQEEALLYLDQVTAWILSHGWT 383
            + TGNWGCG FGGD ELKA IQWLAASQ  +PFI YYTF  EAL  LDQVT WILSH WT
Sbjct: 446  VATGNWGCGVFGGDPELKATIQWLAASQTRRPFISYYTFGVEALRNLDQVTKWILSHKWT 505

Query: 382  VGDLWNMLMEYSSQRIKGDTHSGFFSWLLPAL 287
            VGDLWNM++EYS+QR+   T  GFFSWLLP+L
Sbjct: 506  VGDLWNMMLEYSAQRLYKQTSVGFFSWLLPSL 537


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