BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020698
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containi...   149   2e-34
emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera]   149   2e-34
ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30
ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [S...   129   3e-28
ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containi...   129   3e-28

>ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Vitis vinifera]
          Length = 729

 Score =  149 bits (377), Expect = 2e-34
 Identities = 71/99 (71%), Positives = 83/99 (83%), Gaps = 4/99 (4%)
 Frame = -2

Query: 316 RDVVSWNAMIAAYAQHGEGKEAIHCFEASV----IKPDQATFTTVLSACSHAGLVDEGRR 149
           RD+VSWNAMI+AYAQHG+GKEA+H F+A      +KPDQATFT VLSACSHAGLVD+G R
Sbjct: 547 RDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTR 606

Query: 148 VFSSMVKDHNIEPGMDQYSCIIDLLGRAGYLDEAESLIN 32
           +F+SMV D+  EPG D  SCI+DLLGRAGYL+EAE LIN
Sbjct: 607 IFNSMVNDYGFEPGADHLSCIVDLLGRAGYLEEAERLIN 645


>emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera]
          Length = 690

 Score =  149 bits (377), Expect = 2e-34
 Identities = 71/99 (71%), Positives = 83/99 (83%), Gaps = 4/99 (4%)
 Frame = -2

Query: 316 RDVVSWNAMIAAYAQHGEGKEAIHCFEASV----IKPDQATFTTVLSACSHAGLVDEGRR 149
           RD+VSWNAMI+AYAQHG+GKEA+H F+A      +KPDQATFT VLSACSHAGLVD+G R
Sbjct: 508 RDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTR 567

Query: 148 VFSSMVKDHNIEPGMDQYSCIIDLLGRAGYLDEAESLIN 32
           +F+SMV D+  EPG D  SCI+DLLGRAGYL+EAE LIN
Sbjct: 568 IFNSMVNDYGFEPGADHLSCIVDLLGRAGYLEEAERLIN 606


>ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Glycine max]
          Length = 722

 Score =  136 bits (342), Expect = 2e-30
 Identities = 64/98 (65%), Positives = 80/98 (81%), Gaps = 4/98 (4%)
 Frame = -2

Query: 316 RDVVSWNAMIAAYAQHGEGKEAIHCFEASV----IKPDQATFTTVLSACSHAGLVDEGRR 149
           RD ++WNA+I+AYAQHG G+EA+ CFEA      IKPDQATFT+VLSACSHAGLVD+G R
Sbjct: 540 RDTITWNAIISAYAQHGRGEEAVCCFEAMQTSPGIKPDQATFTSVLSACSHAGLVDDGIR 599

Query: 148 VFSSMVKDHNIEPGMDQYSCIIDLLGRAGYLDEAESLI 35
           +F +MVK +   P +D +SCI+DLLGR+GYLDEAE +I
Sbjct: 600 IFDTMVKVYGFVPSVDHFSCIVDLLGRSGYLDEAERVI 637


>ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
           gi|241939050|gb|EES12195.1| hypothetical protein
           SORBIDRAFT_06g017170 [Sorghum bicolor]
          Length = 688

 Score =  129 bits (324), Expect = 3e-28
 Identities = 62/104 (59%), Positives = 73/104 (70%), Gaps = 3/104 (2%)
 Frame = -2

Query: 316 RDVVSWNAMIAAYAQHGEGKEAIHCFEASVIK---PDQATFTTVLSACSHAGLVDEGRRV 146
           RD VSWNAMI  YAQ+G  K+A+H FE  +     PD  T   VLSAC H+GLVDEGRR 
Sbjct: 455 RDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRY 514

Query: 145 FSSMVKDHNIEPGMDQYSCIIDLLGRAGYLDEAESLINVMPFQP 14
           F SM +DH I P  D Y+C++DLLGRAG+L EAE LIN MP +P
Sbjct: 515 FHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEP 558



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
 Frame = -2

Query: 316 RDVVSWNAMIAAYAQHGEGKEAIHCFE---ASVIKPDQATFTTVLSACSHAGLVDEGRRV 146
           R+VVSWN++I  Y Q+G   EA+  F    A+   PD+ T ++V+SAC+      EGR+V
Sbjct: 215 RNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQV 274

Query: 145 FSSMVKDHNIEPGMDQYSCIIDLLGRAGYLDEAESLINVMPFQPI 11
            + MVK   +   M   + ++D+  + G   EA  + + MP + I
Sbjct: 275 HAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSI 319


>ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Cucumis sativus]
          Length = 735

 Score =  129 bits (323), Expect = 3e-28
 Identities = 59/98 (60%), Positives = 79/98 (80%), Gaps = 4/98 (4%)
 Frame = -2

Query: 316 RDVVSWNAMIAAYAQHGEGKEAIHCFEASV----IKPDQATFTTVLSACSHAGLVDEGRR 149
           RD+VSWN++I+AYAQHG+GKEA+ CF+A      I PDQATFTT+LSACSHAGLV+E  +
Sbjct: 554 RDIVSWNSIISAYAQHGQGKEAVDCFKAMQDMPSIMPDQATFTTILSACSHAGLVEEACQ 613

Query: 148 VFSSMVKDHNIEPGMDQYSCIIDLLGRAGYLDEAESLI 35
           +   M+ D+   P +DQ SCI+DL+GR+GY+D+AES+I
Sbjct: 614 ILDIMLIDYRAVPSVDQLSCIVDLIGRSGYIDQAESVI 651