BLASTX nr result

ID: Cimicifuga21_contig00020693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020693
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613503.1| Tetratricopeptide repeat protein [Medicago t...    86   4e-15
ref|XP_003613502.1| Tetratricopeptide repeat protein [Medicago t...    86   4e-15
ref|XP_002274190.1| PREDICTED: tetratricopeptide repeat protein ...    82   6e-14
ref|XP_002311871.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_004135208.1| PREDICTED: tetratricopeptide repeat protein ...    80   2e-13

>ref|XP_003613503.1| Tetratricopeptide repeat protein [Medicago truncatula]
           gi|355514838|gb|AES96461.1| Tetratricopeptide repeat
           protein [Medicago truncatula]
          Length = 392

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/91 (47%), Positives = 56/91 (61%)
 Frame = -1

Query: 276 YDCFIWKELERCDATAAEXXXXXXXXXXXXXXXGRISEFGDSLKILAEYLTDKQFWHLEW 97
           YD +IWKEL++ DAT AE                 +  FGD LK+LA+ L D+  W+LEW
Sbjct: 255 YDNYIWKELDKTDATVAEVYLNAVALLLRLCVRDELEFFGDRLKMLADRLADQANWYLEW 314

Query: 96  HLDLLILWALACTGKHFDAENLLESLKCRMS 4
           HLD+L +WALA TG+   AE LL+ LK R+S
Sbjct: 315 HLDILTVWALAKTGQISKAEELLKGLKERIS 345


>ref|XP_003613502.1| Tetratricopeptide repeat protein [Medicago truncatula]
           gi|355514837|gb|AES96460.1| Tetratricopeptide repeat
           protein [Medicago truncatula]
          Length = 468

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/91 (47%), Positives = 56/91 (61%)
 Frame = -1

Query: 276 YDCFIWKELERCDATAAEXXXXXXXXXXXXXXXGRISEFGDSLKILAEYLTDKQFWHLEW 97
           YD +IWKEL++ DAT AE                 +  FGD LK+LA+ L D+  W+LEW
Sbjct: 255 YDNYIWKELDKTDATVAEVYLNAVALLLRLCVRDELEFFGDRLKMLADRLADQANWYLEW 314

Query: 96  HLDLLILWALACTGKHFDAENLLESLKCRMS 4
           HLD+L +WALA TG+   AE LL+ LK R+S
Sbjct: 315 HLDILTVWALAKTGQISKAEELLKGLKERIS 345


>ref|XP_002274190.1| PREDICTED: tetratricopeptide repeat protein 38 [Vitis vinifera]
           gi|296086448|emb|CBI32037.3| unnamed protein product
           [Vitis vinifera]
          Length = 468

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/91 (47%), Positives = 52/91 (57%)
 Frame = -1

Query: 276 YDCFIWKELERCDATAAEXXXXXXXXXXXXXXXGRISEFGDSLKILAEYLTDKQFWHLEW 97
           YD +IWKELER DA +AE               G    F D LK L   LTD+  W++EW
Sbjct: 255 YDNYIWKELERPDAASAEVYLNALGLLLRVYVRGHAVVFEDRLKTLVSRLTDQSTWYIEW 314

Query: 96  HLDLLILWALACTGKHFDAENLLESLKCRMS 4
           HLDLL +WALA TG+    E LL+ LK R+S
Sbjct: 315 HLDLLTIWALASTGELVKTEALLQGLKSRLS 345


>ref|XP_002311871.1| predicted protein [Populus trichocarpa] gi|222851691|gb|EEE89238.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/90 (47%), Positives = 52/90 (57%)
 Frame = -1

Query: 276 YDCFIWKELERCDATAAEXXXXXXXXXXXXXXXGRISEFGDSLKILAEYLTDKQFWHLEW 97
           YD  IWKELE+ DA   E               G +  F D L  LA  +TD+  W+LEW
Sbjct: 256 YDQHIWKELEKADAVPPEVYLNALGLLLRVYLRGELDIFDDRLNTLASCITDQANWYLEW 315

Query: 96  HLDLLILWALACTGKHFDAENLLESLKCRM 7
           HLD+LILWALA TG+   AE+LLE LK R+
Sbjct: 316 HLDVLILWALAKTGEPSKAEDLLEGLKSRI 345


>ref|XP_004135208.1| PREDICTED: tetratricopeptide repeat protein 38-like [Cucumis
           sativus] gi|449478487|ref|XP_004155331.1| PREDICTED:
           tetratricopeptide repeat protein 38-like [Cucumis
           sativus]
          Length = 469

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 44/91 (48%), Positives = 50/91 (54%)
 Frame = -1

Query: 276 YDCFIWKELERCDATAAEXXXXXXXXXXXXXXXGRISEFGDSLKILAEYLTDKQFWHLEW 97
           YD +IWKELE+ DA   E               G        LKILA  LTDK  WHLEW
Sbjct: 255 YDNYIWKELEKPDAIGPEVYLNALGLMLRLFVRGEYDPCEGRLKILANVLTDKANWHLEW 314

Query: 96  HLDLLILWALACTGKHFDAENLLESLKCRMS 4
           H D+L LWALA  G+ F A+ LL SLK R+S
Sbjct: 315 HFDILTLWALAKAGEIFAADELLGSLKSRLS 345


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