BLASTX nr result

ID: Cimicifuga21_contig00020686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020686
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 ...   161   7e-38
emb|CBI17313.3| unnamed protein product [Vitis vinifera]              155   5e-36
ref|XP_002266394.1| PREDICTED: high mobility group B protein 15-...   155   5e-36
emb|CAN83439.1| hypothetical protein VITISV_021289 [Vitis vinifera]   155   5e-36
ref|XP_002518095.1| transcription factor, putative [Ricinus comm...   154   1e-35

>ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 [Vitis vinifera]
           gi|296090037|emb|CBI39856.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score =  161 bits (408), Expect = 7e-38
 Identities = 76/102 (74%), Positives = 86/102 (84%)
 Frame = +1

Query: 247 APYEQVAQDAQLFMDTLQDLHRSLATKFAVPIMGGKALDLHRLFVEVTARGGLEKVIRNR 426
           A Y++V Q A LF  TL+D HRS  TKF VP  GGKALDLHRLFVEVT+RGGLEKVIR+R
Sbjct: 45  AQYQEVVQSADLFWQTLKDFHRSFGTKFMVPTTGGKALDLHRLFVEVTSRGGLEKVIRDR 104

Query: 427 QWKEIIAVFSFPSTITNASFVLRKYYLSLLHHYEEVYYLRKQ 552
           +WKE+  VF FP+TIT+ASFVLRKYYLSLLHHYE+VYY RKQ
Sbjct: 105 KWKEVTTVFKFPTTITSASFVLRKYYLSLLHHYEQVYYFRKQ 146


>emb|CBI17313.3| unnamed protein product [Vitis vinifera]
          Length = 483

 Score =  155 bits (392), Expect = 5e-36
 Identities = 70/104 (67%), Positives = 86/104 (82%)
 Frame = +1

Query: 244 VAPYEQVAQDAQLFMDTLQDLHRSLATKFAVPIMGGKALDLHRLFVEVTARGGLEKVIRN 423
           +A YE +    +LFM TL+ LH  + TKF +PI+GGK LDLHRLFVEVT+RGGLEK+IR 
Sbjct: 50  LAKYEDIVSSPKLFMGTLEKLHAVMGTKFMIPIIGGKELDLHRLFVEVTSRGGLEKIIRE 109

Query: 424 RQWKEIIAVFSFPSTITNASFVLRKYYLSLLHHYEEVYYLRKQG 555
           R+WKE+ AVFSFPST TNASFVLRKYY+SLLHHYE++Y+ + QG
Sbjct: 110 RRWKEVTAVFSFPSTATNASFVLRKYYVSLLHHYEQIYFFKAQG 153


>ref|XP_002266394.1| PREDICTED: high mobility group B protein 15-like [Vitis vinifera]
          Length = 482

 Score =  155 bits (392), Expect = 5e-36
 Identities = 70/104 (67%), Positives = 86/104 (82%)
 Frame = +1

Query: 244 VAPYEQVAQDAQLFMDTLQDLHRSLATKFAVPIMGGKALDLHRLFVEVTARGGLEKVIRN 423
           +A YE +    +LFM TL+ LH  + TKF +PI+GGK LDLHRLFVEVT+RGGLEK+IR 
Sbjct: 49  LAKYEDIVSSPKLFMGTLEKLHAVMGTKFMIPIIGGKELDLHRLFVEVTSRGGLEKIIRE 108

Query: 424 RQWKEIIAVFSFPSTITNASFVLRKYYLSLLHHYEEVYYLRKQG 555
           R+WKE+ AVFSFPST TNASFVLRKYY+SLLHHYE++Y+ + QG
Sbjct: 109 RRWKEVTAVFSFPSTATNASFVLRKYYVSLLHHYEQIYFFKAQG 152


>emb|CAN83439.1| hypothetical protein VITISV_021289 [Vitis vinifera]
          Length = 461

 Score =  155 bits (392), Expect = 5e-36
 Identities = 70/104 (67%), Positives = 86/104 (82%)
 Frame = +1

Query: 244 VAPYEQVAQDAQLFMDTLQDLHRSLATKFAVPIMGGKALDLHRLFVEVTARGGLEKVIRN 423
           +A YE +    +LFM TL+ LH  + TKF +PI+GGK LDLHRLFVEVT+RGGLEK+IR 
Sbjct: 28  LAKYEDIVSSPKLFMGTLEKLHAVMGTKFMIPIIGGKELDLHRLFVEVTSRGGLEKIIRE 87

Query: 424 RQWKEIIAVFSFPSTITNASFVLRKYYLSLLHHYEEVYYLRKQG 555
           R+WKE+ AVFSFPST TNASFVLRKYY+SLLHHYE++Y+ + QG
Sbjct: 88  RRWKEVTAVFSFPSTATNASFVLRKYYVSLLHHYEQIYFFKAQG 131


>ref|XP_002518095.1| transcription factor, putative [Ricinus communis]
           gi|223542691|gb|EEF44228.1| transcription factor,
           putative [Ricinus communis]
          Length = 466

 Score =  154 bits (388), Expect = 1e-35
 Identities = 69/103 (66%), Positives = 87/103 (84%)
 Frame = +1

Query: 247 APYEQVAQDAQLFMDTLQDLHRSLATKFAVPIMGGKALDLHRLFVEVTARGGLEKVIRNR 426
           A YE VA D +LFM TL+ LH ++ TKF +PI+GG+ LDLHRLFVEVT+RGGLEK+IR R
Sbjct: 29  ARYEDVASDPKLFMSTLESLHAAMGTKFMIPIIGGRELDLHRLFVEVTSRGGLEKIIRER 88

Query: 427 QWKEIIAVFSFPSTITNASFVLRKYYLSLLHHYEEVYYLRKQG 555
           +WKE+ A+F+FPST TNASFVLRKYY SLLHHYE++Y+ + +G
Sbjct: 89  RWKEVTAIFNFPSTATNASFVLRKYYGSLLHHYEQLYFFKARG 131


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