BLASTX nr result

ID: Cimicifuga21_contig00020684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020684
         (872 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21158.3| unnamed protein product [Vitis vinifera]              279   5e-73
ref|XP_002283376.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   279   5e-73
ref|XP_004145492.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   266   5e-69
ref|XP_002515408.1| Ubiquitin carboxyl-terminal hydrolase, putat...   266   5e-69
ref|XP_002309685.1| predicted protein [Populus trichocarpa] gi|2...   245   1e-62

>emb|CBI21158.3| unnamed protein product [Vitis vinifera]
          Length = 529

 Score =  279 bits (714), Expect = 5e-73
 Identities = 134/215 (62%), Positives = 167/215 (77%), Gaps = 5/215 (2%)
 Frame = +2

Query: 242 MTSRNPTYTNPLPCSHLADYKQKHGLNGYNSLQSSLKTTPNGRTTINRDKTKIPKCRFCS 421
           M+ +NP+YTNP PC HLADYK +HGLNG+ +LQ+ LKTTP GRT++++ K++ P+C  C 
Sbjct: 1   MSKQNPSYTNPKPCKHLADYKLRHGLNGFKTLQNCLKTTPYGRTSVSKHKSETPRCSLCF 60

Query: 422 GCQGRLYFCLICSSVSCSNHALLHSKTENGHEIAVVVERAELFCFVCCDQVYDPDFDKAV 601
           G QGRLYFCLICSS++CS+HA  HS++ +GHEIAV VERAEL+C VC DQVYDPDFD+AV
Sbjct: 61  GYQGRLYFCLICSSITCSSHANEHSQSHHGHEIAVDVERAELYCCVCRDQVYDPDFDRAV 120

Query: 602 MCKQMMEMPRNNNGVDLIGKETSLKKRKLDSS-----KNPIKLILKIRRGSSSDFPWGLR 766
           + K  M+MP N NGV+ + +E++ K+R+L        K   +LI    R + S FP GLR
Sbjct: 121 VSKHFMDMPSNVNGVEGVVEESN-KRRRLGLGLELEWKRSKRLISMADRRAKSIFPLGLR 179

Query: 767 GLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNR 871
           GLNNLGNTCFMNSVLQAL H PPLRNYFLSDRHNR
Sbjct: 180 GLNNLGNTCFMNSVLQALFHAPPLRNYFLSDRHNR 214


>ref|XP_002283376.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Vitis
           vinifera]
          Length = 553

 Score =  279 bits (714), Expect = 5e-73
 Identities = 134/215 (62%), Positives = 167/215 (77%), Gaps = 5/215 (2%)
 Frame = +2

Query: 242 MTSRNPTYTNPLPCSHLADYKQKHGLNGYNSLQSSLKTTPNGRTTINRDKTKIPKCRFCS 421
           M+ +NP+YTNP PC HLADYK +HGLNG+ +LQ+ LKTTP GRT++++ K++ P+C  C 
Sbjct: 1   MSKQNPSYTNPKPCKHLADYKLRHGLNGFKTLQNCLKTTPYGRTSVSKHKSETPRCSLCF 60

Query: 422 GCQGRLYFCLICSSVSCSNHALLHSKTENGHEIAVVVERAELFCFVCCDQVYDPDFDKAV 601
           G QGRLYFCLICSS++CS+HA  HS++ +GHEIAV VERAEL+C VC DQVYDPDFD+AV
Sbjct: 61  GYQGRLYFCLICSSITCSSHANEHSQSHHGHEIAVDVERAELYCCVCRDQVYDPDFDRAV 120

Query: 602 MCKQMMEMPRNNNGVDLIGKETSLKKRKLDSS-----KNPIKLILKIRRGSSSDFPWGLR 766
           + K  M+MP N NGV+ + +E++ K+R+L        K   +LI    R + S FP GLR
Sbjct: 121 VSKHFMDMPSNVNGVEGVVEESN-KRRRLGLGLELEWKRSKRLISMADRRAKSIFPLGLR 179

Query: 767 GLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNR 871
           GLNNLGNTCFMNSVLQAL H PPLRNYFLSDRHNR
Sbjct: 180 GLNNLGNTCFMNSVLQALFHAPPLRNYFLSDRHNR 214


>ref|XP_004145492.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
           sativus] gi|449515075|ref|XP_004164575.1| PREDICTED:
           ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
           sativus]
          Length = 552

 Score =  266 bits (680), Expect = 5e-69
 Identities = 127/215 (59%), Positives = 162/215 (75%), Gaps = 5/215 (2%)
 Frame = +2

Query: 242 MTSRNPTYTNPLPCSHLADYKQKHGLNGYNSLQSSLKTTPNGRTTINRDKTKIPKCRFCS 421
           M+ RNP+Y+NP PC+HLADYK ++GLNGY S+Q+ LKT+PNGRT+I    +K+P+C  C 
Sbjct: 1   MSQRNPSYSNPTPCNHLADYKLRYGLNGYKSIQNHLKTSPNGRTSIQNPDSKLPRCGSCD 60

Query: 422 GCQGRLYFCLICSSVSCSNHALLHSKTENGHEIAVVVERAELFCFVCCDQVYDPDFDKAV 601
           G +GRLY CLIC+S+SCSNH LLH ++ENGH++AV VERAEL+C+ C DQVYDPDFD+ V
Sbjct: 61  GYKGRLYICLICASISCSNHTLLHYQSENGHDLAVDVERAELYCYACSDQVYDPDFDRTV 120

Query: 602 MCKQMMEMPRNNNGVDLIGKETSLKKRKLDS-----SKNPIKLILKIRRGSSSDFPWGLR 766
           M K ++   ++ +  + IG E S K+R+L S      KN   LI    + S S +P GLR
Sbjct: 121 MSKHIVVPEKSKSQSESIG-ERSSKRRRLGSVDLLDLKNLKPLISVKDQRSKSCYPLGLR 179

Query: 767 GLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNR 871
           GLNNLGNTCFMNSVLQ  LHTPPL NYFL+D+HNR
Sbjct: 180 GLNNLGNTCFMNSVLQVFLHTPPLSNYFLNDQHNR 214


>ref|XP_002515408.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
           gi|223545352|gb|EEF46857.1| Ubiquitin carboxyl-terminal
           hydrolase, putative [Ricinus communis]
          Length = 551

 Score =  266 bits (680), Expect = 5e-69
 Identities = 129/215 (60%), Positives = 160/215 (74%), Gaps = 5/215 (2%)
 Frame = +2

Query: 242 MTSRNPTYTNPLPCSHLADYKQKHGLNGYNSLQSSLKTTPNGRTTINRDKTKIPKCRFCS 421
           M + NP YTNP  C HLADYK +HGL+GY  LQ+ LKTTP+G T++ +  TKIP+C FC 
Sbjct: 1   MATSNPLYTNPKLCKHLADYKLRHGLSGYKFLQNCLKTTPSGITSVYKSDTKIPRCSFCK 60

Query: 422 GCQGRLYFCLICSSVSCSNHALLHSKTENGHEIAVVVERAELFCFVCCDQVYDPDFDKAV 601
           G QGR + CLICSS+SCS+H LLH+++EN H+IAV +ER+EL+C +C DQVYDPDFDK V
Sbjct: 61  GYQGRFFMCLICSSISCSSHTLLHAQSENSHDIAVDIERSELYCSLCSDQVYDPDFDKVV 120

Query: 602 MCKQMMEMPRNNNGVDLIGKETSLKKRKLDS-----SKNPIKLILKIRRGSSSDFPWGLR 766
           + K M++MP N + VD  G   S K+RKL+S      K   +L+L   R   S +P GLR
Sbjct: 121 VSKVMLDMPNNAHIVD-DGIRRSSKRRKLNSLMELDLKKSKQLVLMRDRREKSCYPLGLR 179

Query: 767 GLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNR 871
           GLNNLG+TCFMNSVLQALLH PP RNYFLSDRH+R
Sbjct: 180 GLNNLGSTCFMNSVLQALLHAPPFRNYFLSDRHDR 214


>ref|XP_002309685.1| predicted protein [Populus trichocarpa] gi|222855661|gb|EEE93208.1|
           predicted protein [Populus trichocarpa]
          Length = 519

 Score =  245 bits (625), Expect = 1e-62
 Identities = 121/218 (55%), Positives = 160/218 (73%), Gaps = 8/218 (3%)
 Frame = +2

Query: 242 MTSRNPTYTNPLPCSHLADYKQKHGLNGYNSLQSSLKTTPNGRTTINRDKTKIPKCRFCS 421
           M +R+  + NP PC HL DYK +HGL+GY  LQ  LKT PNG+T+I   +TK+PKC FCS
Sbjct: 1   METRSSVFANPKPCKHLTDYKLRHGLSGYKFLQKWLKTFPNGKTSIKMCETKMPKCSFCS 60

Query: 422 GC-QGRLYFCLICSSVSCSNHALLHSKTENGHEIAVVVERAELFCFVCCDQVYDPDFDKA 598
           G  QGRL+ CLICSS+SCS+H LLHS++ENGH+IAV +ER+EL+C  C DQVYD DFDK 
Sbjct: 61  GIRQGRLFLCLICSSMSCSDHTLLHSQSENGHDIAVDIERSELYCCSCSDQVYDLDFDKV 120

Query: 599 VMCKQMMEMP--RNNNGVDLIGKETSLKKR-----KLDSSKNPIKLILKIRRGSSSDFPW 757
           V+ K +++MP    ++ VD + + +S ++R      LD  ++   + ++ RR  S  +P 
Sbjct: 121 VVAKNIVDMPSKTRDSVVDDLMRRSSKRRRLNSVVDLDLIRSKFFVWMRGRRAKSC-YPL 179

Query: 758 GLRGLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNR 871
           GLRGLNNLG+TCFMNS+LQALLH PP RNYFLS+RH+R
Sbjct: 180 GLRGLNNLGSTCFMNSILQALLHAPPFRNYFLSERHDR 217


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