BLASTX nr result

ID: Cimicifuga21_contig00020679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020679
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
emb|CAD56664.1| S locus F-box (SLF)-S5 protein [Antirrhinum hisp...    65   4e-09
gb|ABI30337.1| SLF-like protein 1 [Antirrhinum majus]                  65   6e-09
ref|XP_002512931.1| conserved hypothetical protein [Ricinus comm...    65   7e-09
dbj|BAD37944.1| hypothetical protein [Oryza sativa Japonica Grou...    64   2e-08

>ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|222854764|gb|EEE92311.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/99 (36%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
 Frame = -2

Query: 309 MPEDVVFQILLWLPVISLLRFKSVCKSWCALIENSTFVNQHLLHN---RSNTNLIVRDYD 139
           +P +V+  ILL LPV SL+RF+S+ K  C+LI+   F+N HL H+   +SN ++I++++D
Sbjct: 4   IPHEVIHDILLQLPVKSLVRFRSLSKPICSLIDGPNFINLHLNHSITTKSNHSIILKEWD 63

Query: 138 QFVMLSGHKFEATVPIDFHWYPGNDARIMNSINGIVCLR 22
            F +      +A        Y G    ++ S+NG+V LR
Sbjct: 64  LFAVDFDALSDAVEVKHHPLYSGGGTEVIGSVNGLVFLR 102


>emb|CAD56664.1| S locus F-box (SLF)-S5 protein [Antirrhinum hispanicum]
          Length = 376

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 21/116 (18%)
 Frame = -2

Query: 303 EDVVFQILLWLPVISLLRFKSVCKSWCALIENSTFVNQHLLHNRSNTNLIV--------- 151
           +DV+ +ILL+  V SLLRF+ V KSWC+LI+++ F++ HLL  ++N N++V         
Sbjct: 9   QDVISEILLFSSVKSLLRFRCVSKSWCSLIKSNDFIDNHLLRRQTNGNVMVVKRYVRTPE 68

Query: 150 RDYDQFVMLSGHKFEATVP---------IDF---HWYPGNDARIMNSINGIVCLRH 19
           RD   F  ++  K E  +P         I F   ++Y      +M   NG++CL +
Sbjct: 69  RDMFSFYNINSPKLEELLPDLPNPYFKNIKFDYDYFYLPQRVNLMGPCNGLICLAY 124


>gb|ABI30337.1| SLF-like protein 1 [Antirrhinum majus]
          Length = 376

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 21/116 (18%)
 Frame = -2

Query: 303 EDVVFQILLWLPVISLLRFKSVCKSWCALIENSTFVNQHLLHNRSNTNLIV--------- 151
           +DV+ +ILL+  V SLLRF+ V KSWC+LI+++ F++ HLL  ++N N++V         
Sbjct: 9   QDVINEILLFSSVKSLLRFRCVSKSWCSLIKSNDFIDNHLLRRQTNGNVMVVKRYVRTPE 68

Query: 150 RDYDQFVMLSGHKFEATVP---------IDF---HWYPGNDARIMNSINGIVCLRH 19
           RD   F  ++  K E  +P         I F   ++Y      +M   NG++CL +
Sbjct: 69  RDMFSFYNINSPKLEELLPDLPNPYFKNIKFDYDYFYLPQRVNLMGPCNGLICLAY 124


>ref|XP_002512931.1| conserved hypothetical protein [Ricinus communis]
           gi|223547942|gb|EEF49434.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 386

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 20/116 (17%)
 Frame = -2

Query: 309 MPEDVVFQILLWLPVISLLRFKSVCKSWCALIENSTFVNQHLLHNRSNTN-------LIV 151
           +PED++ +ILL LP++ L+RF+ VCKSWCAL+ +  F+ + LL N  + N       ++V
Sbjct: 5   LPEDLIIKILLRLPMLYLVRFRCVCKSWCALLSDPKFIYKKLLCNGEHQNYDNSPHPVVV 64

Query: 150 RDYDQ------FVMLSGHKFEATVPIDFHWYPGNDARIMNSI-------NGIVCLR 22
           +  D       F +LS   FE + P +   YP +    M+ I       NG +CLR
Sbjct: 65  KRRDMSTRNYFFSVLSCETFEMSAPKEIP-YPKDIMENMSDISIVGSSSNGFICLR 119


>dbj|BAD37944.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|51536112|dbj|BAD38236.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 371

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/53 (54%), Positives = 40/53 (75%)
 Frame = -2

Query: 309 MPEDVVFQILLWLPVISLLRFKSVCKSWCALIENSTFVNQHLLHNRSNTNLIV 151
           +PEDV+F+IL WLP  SL+RF+SVCK+W A I +S FVN HL  ++   +L+V
Sbjct: 36  IPEDVLFKILSWLPSKSLIRFRSVCKAWHATISSSRFVNAHLECSKQRPSLLV 88


Top