BLASTX nr result
ID: Cimicifuga21_contig00020635
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00020635
(1052 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2... 154 3e-35
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ... 154 5e-35
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] 148 2e-33
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ... 147 3e-33
gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo] 143 6e-32
>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
predicted protein [Populus trichocarpa]
Length = 393
Score = 154 bits (390), Expect = 3e-35
Identities = 106/322 (32%), Positives = 150/322 (46%), Gaps = 31/322 (9%)
Frame = +1
Query: 178 VSNFVDLIRFRSVCKSWGSISPKKPQNPTPQLPWLLLSSDDDTIATPRCHFFSLSDNRVY 357
++ + D + F++VC +W S PK P + PQLPWLLL ++ R FF+LS + +
Sbjct: 20 ITIYSDYLHFQAVCHAWKSSIPKTPNHLPPQLPWLLLPQSQSNQSSYRA-FFNLSTYKFH 78
Query: 358 SFPLSE-SIRNLCCRSYHGWLFMVDNDRNCSLLNPLTGVXXXXXXXXXXXXXXXXXKNCV 534
S L E S R C S HGWL ++D+ + ++NPLT V
Sbjct: 79 SLNLPEASHRKKHCGSSHGWLIILDDSPSILVINPLTRRKIHLPAISSFPNVVSFDYANV 138
Query: 535 AKAALSSTPTPNSNTNQV------------------------CLLMAIVGDFGRLALSKL 642
+ L P NT + + MAI+ G LA K
Sbjct: 139 GREYLLVNPQGERNTASLRQMRDGFIKKVVMSSSPLEKKGDFFVAMAILCSTGDLAYCKN 198
Query: 643 GDNTWIQVIDEMGQRFEDVVYFKGNFYAVDCYGRIVVCDLADPAPVTTEIKEQESFKADK 822
GD W +++ EDV+YF G FYAV+ G+IVVCD+ +P + I+ D
Sbjct: 199 GDECW-NIVENSRSFSEDVIYFNGLFYAVNKAGQIVVCDVNGNSPKVSFIETPRQIGGDM 257
Query: 823 TYLVESSGQLLLIMRFSGKKVK------RTILFKVFQEDPISKKWVEVKNLRGQALFLGY 984
YLV S LLL+ R+ V+ +T F+VF+ D +W V +L LF+G
Sbjct: 258 QYLVSSGDGLLLVTRYLDLDVEFDIFIYKTARFEVFKLDLNGPRWERVTSLGDMMLFIGE 317
Query: 985 NHSLSLLASEFFGCRGDCIYFT 1050
N SL+L AS GC GDCIY+T
Sbjct: 318 NSSLALSASGLSGCMGDCIYYT 339
>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 398
Score = 154 bits (388), Expect = 5e-35
Identities = 101/327 (30%), Positives = 154/327 (47%), Gaps = 39/327 (11%)
Frame = +1
Query: 187 FVDLIRFRSVCKSWGSISPKKPQNPTPQLPWLLLSSDDDTIATPRCHFFSLSDNRVYSFP 366
+ D + R+VC +W PK P + PQLPWL+L R FFSLS N+ +
Sbjct: 23 YSDYLYSRAVCHAWRFSIPKTPNHLPPQLPWLMLPQSQSQSNQSRRAFFSLSTNKFHFLN 82
Query: 367 LSE-SIRNLCCRSYHGWLFMVDNDRNCSLLNPLTGVXXXXXXXXXXXXXXXXX------- 522
L E S R C S HGWL ++D+ L+NPLT
Sbjct: 83 LPEVSYRKRHCGSSHGWLMILDDTPTILLINPLTRAKLSLPPLSSFPNVISFNYSDIGRE 142
Query: 523 -------------------KNCVAKAALSSTPTPNSNTNQVCLLMAIVGDFGRLALSKLG 645
+ + K LSS+P ++N +++AI+ LA + G
Sbjct: 143 YALRNLLGERVTVSLRQMRDSFIRKVVLSSSPLKDNNF----VVIAILNQTDDLAYCRNG 198
Query: 646 DNTWIQVIDEMGQRFEDVVYFKGNFYAVDCYGRIVVCDLADPAPVTTEIKEQESFKADKT 825
D +W +++ EDV++ G FYAV+ G+IV+CD++ +P + ++ D
Sbjct: 199 DKSW-SLVENARSFCEDVIFVNGMFYAVNKAGQIVICDISSDSPRVSFMETPRQAGGDMQ 257
Query: 826 YLVESSGQLLLIMRFSGKK------------VKRTILFKVFQEDPISKKWVEVKNLRGQA 969
YLV S +LLL+ R+ + + RTI F+VF+ D +W+ + L +A
Sbjct: 258 YLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKA 317
Query: 970 LFLGYNHSLSLLASEFFGCRGDCIYFT 1050
LF+G N SLSL A++F GC G+CIY+T
Sbjct: 318 LFIGENSSLSLSATDFSGCMGNCIYYT 344
>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
Length = 389
Score = 148 bits (374), Expect = 2e-33
Identities = 106/326 (32%), Positives = 154/326 (47%), Gaps = 38/326 (11%)
Frame = +1
Query: 187 FVDLIRFRSVCKSWGSISPKKPQNPTPQLPWLLL-SSDDDTIATPRCHFFSLSDNRVYSF 363
+ D +RFR+VC +W + PK P + QLPWL+L S P FFSLS N+ +
Sbjct: 22 YTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPHHTHRP---FFSLSLNKFHFL 78
Query: 364 PLSESIRNLCCR-SYHGWLFMVDNDRNCSLLNPLTG------------------------ 468
L E+ R S HGWL ++D LLNPLT
Sbjct: 79 QLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLPPLSTFPNVVRFNFADVGR 138
Query: 469 --VXXXXXXXXXXXXXXXXXKNCVAKAALSSTPTPNSNTNQVCLLMAIVGDFGRLALSKL 642
+ + K LSS+P S+ + + I+ G LAL +
Sbjct: 139 EYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSDF----IAVVILNQTGDLALCRK 194
Query: 643 GDNTWIQVIDEMGQRFEDVVYFKGNFYAVDCYGRIVVCDLADPAPVTTEIKEQESFKADK 822
D++W + D EDV++ +G FYAV+ YG I VCD++ +P + I+ + F D
Sbjct: 195 SDDSWTFLEDAQSYS-EDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEMPQQFGGDL 253
Query: 823 TYLVESSGQLLLIMRF----------SGKKVKRTILFKVFQEDPISKKWVEVKNLRGQAL 972
YLVES +LLL+ R+ + RT F+V + D + +W V +L +AL
Sbjct: 254 QYLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRAL 313
Query: 973 FLGYNHSLSLLASEFFGCRGDCIYFT 1050
FLG N SLSL + +F GC+G+CIY+T
Sbjct: 314 FLGENLSLSLSSVDFPGCKGNCIYYT 339
>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
Length = 389
Score = 147 bits (372), Expect = 3e-33
Identities = 106/326 (32%), Positives = 154/326 (47%), Gaps = 38/326 (11%)
Frame = +1
Query: 187 FVDLIRFRSVCKSWGSISPKKPQNPTPQLPWLLL-SSDDDTIATPRCHFFSLSDNRVYSF 363
+ D +RFR+VC +W + PK P + QLPWL+L S P FFSLS N+ +
Sbjct: 22 YTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPHHTHRP---FFSLSLNKFHFL 78
Query: 364 PLSESIRNLCCR-SYHGWLFMVDNDRNCSLLNPLTG------------------------ 468
L E+ R S HGWL ++D LLNPLT
Sbjct: 79 QLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLPPLSTFPNVVRFNFADVGR 138
Query: 469 --VXXXXXXXXXXXXXXXXXKNCVAKAALSSTPTPNSNTNQVCLLMAIVGDFGRLALSKL 642
+ + K LSS+P S+ + + I+ G LAL +
Sbjct: 139 EYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSDF----IAVVILNQTGDLALCRK 194
Query: 643 GDNTWIQVIDEMGQRFEDVVYFKGNFYAVDCYGRIVVCDLADPAPVTTEIKEQESFKADK 822
D++W + D EDV++ +G FYAV+ YG I VCD++ +P + I+ + F D
Sbjct: 195 SDDSWTFLEDAQSYA-EDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEMPQQFGGDL 253
Query: 823 TYLVESSGQLLLIMRF----------SGKKVKRTILFKVFQEDPISKKWVEVKNLRGQAL 972
YLVES +LLL+ R+ + RT F+V + D + +W V +L +AL
Sbjct: 254 QYLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRAL 313
Query: 973 FLGYNHSLSLLASEFFGCRGDCIYFT 1050
FLG N SLSL + +F GC+G+CIY+T
Sbjct: 314 FLGENLSLSLSSVDFPGCKGNCIYYT 339
>gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]
Length = 392
Score = 143 bits (361), Expect = 6e-32
Identities = 102/323 (31%), Positives = 148/323 (45%), Gaps = 35/323 (10%)
Frame = +1
Query: 187 FVDLIRFRSVCKSWGSISPKKPQNPTPQLPWLLLSSDDDTIATPRCHFFSLSDNRVYSFP 366
+ D +RFR VC+SW S PK P PQLP L++ D RC F+ SDN+++
Sbjct: 22 YSDYLRFRVVCQSWRSSVPKIPHRLPPQLPCLIIPLYHDC----RCGLFNFSDNKIHFLY 77
Query: 367 LSE-SIRNLCCRSYHGWLFMVDNDRNCSLLNPLTGVXXXXXXXXXXXXXXXXXKNCVAKA 543
L E S+R C S HGWL ++D + LLNPLT + V +
Sbjct: 78 LPEASLRKRPCGSSHGWLTILDETPSILLLNPLTRAKFRLPPLSTFPNVVSFDYSRVGRE 137
Query: 544 ALSSTPTPN-----------------------SNTNQVCLLMAIVGDFGRLALSKLGDNT 654
L TPT + SN N L +AI+ G LA + G +
Sbjct: 138 YLIRTPTGHIYTRNLRQMRDSFVKKIVLSSSPSNQNDF-LAVAILNHSGDLAFCRSGGGS 196
Query: 655 WIQVIDEMGQRFEDVVYFKGNFYAVDCYGRIVVCDLADPAPVTTEIKEQESFKADKTYLV 834
W +D+ EDV+Y G FYAVD YG + + DL + + + D YLV
Sbjct: 197 W-TFVDDAPSDCEDVIYTDGVFYAVDKYGVVSLMDLRGSRSQVSLVATERQLAGDIQYLV 255
Query: 835 ESSGQLLLIMRFSG-----------KKVKRTILFKVFQEDPISKKWVEVKNLRGQALFLG 981
+LLL+ R+ + RT+ F+VF+ + +W +V+NL ALF+G
Sbjct: 256 RLGQELLLVSRYLDIVNDGMDDELISVMYRTVRFEVFRMEWEGPRWEKVENLNEMALFVG 315
Query: 982 YNHSLSLLASEFFGCRGDCIYFT 1050
N S++ A++F G+CIY+T
Sbjct: 316 GNSSMAFSAADFGEISGNCIYYT 338