BLASTX nr result

ID: Cimicifuga21_contig00020615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020615
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314310.1| predicted protein [Populus trichocarpa] gi|2...   104   9e-21
ref|XP_002331486.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
gb|AFK42030.1| unknown [Lotus japonicus]                              101   6e-20
ref|XP_003625728.1| Chromodomain-helicase-DNA-binding protein [M...   101   8e-20
ref|XP_004173768.1| PREDICTED: uncharacterized protein LOC101226...   100   1e-19

>ref|XP_002314310.1| predicted protein [Populus trichocarpa] gi|222850718|gb|EEE88265.1|
            predicted protein [Populus trichocarpa]
          Length = 955

 Score =  104 bits (259), Expect = 9e-21
 Identities = 48/80 (60%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
 Frame = -3

Query: 526  QSLFSCIERLLGFLSVKTMVLPSAEESKAIWTDKFGFSTVSPD--KMSEYKNNGQMMVFQ 353
            Q+LF+CIE+LLGFL+VK +VLP+AEE ++IWT+KFGFST++ D  ++ EY+ + Q+M FQ
Sbjct: 875  QTLFTCIEKLLGFLNVKNLVLPAAEEVESIWTNKFGFSTITQDEVRLMEYRKSYQIMEFQ 934

Query: 352  GTSLLQKPVPKCRIVEKPPG 293
            G+ +LQKPVPKCR+V K  G
Sbjct: 935  GSLMLQKPVPKCRVVGKSEG 954


>ref|XP_002331486.1| predicted protein [Populus trichocarpa] gi|222873564|gb|EEF10695.1|
            predicted protein [Populus trichocarpa]
          Length = 973

 Score =  103 bits (258), Expect = 1e-20
 Identities = 47/78 (60%), Positives = 62/78 (79%)
 Frame = -3

Query: 526  QSLFSCIERLLGFLSVKTMVLPSAEESKAIWTDKFGFSTVSPDKMSEYKNNGQMMVFQGT 347
            Q+LF+CIE+LLGFL+VK +VLP+AEE  +IW +KFGF  ++ D++ EY+   Q+MVFQG 
Sbjct: 895  QTLFTCIEKLLGFLNVKNLVLPAAEEVGSIWKNKFGFGAITQDELMEYRRRYQIMVFQGA 954

Query: 346  SLLQKPVPKCRIVEKPPG 293
             +LQKPVPKCRIV K  G
Sbjct: 955  LMLQKPVPKCRIVGKSEG 972


>gb|AFK42030.1| unknown [Lotus japonicus]
          Length = 135

 Score =  101 bits (252), Expect = 6e-20
 Identities = 46/74 (62%), Positives = 64/74 (86%), Gaps = 1/74 (1%)
 Frame = -3

Query: 526 QSLFSCIERLLGFLSVKTMVLPSAEESKAIWTDKFGFSTVSPDKMSEY-KNNGQMMVFQG 350
           Q+LFSCIERLL F++VK++VLP+AEE+++IWTDKFGFS + PD++S+Y KN  QM+ F+G
Sbjct: 58  QTLFSCIERLLAFMNVKSLVLPAAEEAESIWTDKFGFSRMKPDELSDYRKNFNQMVTFKG 117

Query: 349 TSLLQKPVPKCRIV 308
           T++L K VP CRI+
Sbjct: 118 TNMLHKLVPPCRII 131


>ref|XP_003625728.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
           gi|355500743|gb|AES81946.1|
           Chromodomain-helicase-DNA-binding protein [Medicago
           truncatula]
          Length = 730

 Score =  101 bits (251), Expect = 8e-20
 Identities = 44/78 (56%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
 Frame = -3

Query: 526 QSLFSCIERLLGFLSVKTMVLPSAEESKAIWTDKFGFSTVSPDKMSEYKNN-GQMMVFQG 350
           Q+LFSCIERLL F+ VK +VLP+AEE+++IWTDKFGFS + PD+++ Y+ N  Q + FQG
Sbjct: 653 QALFSCIERLLAFMKVKNLVLPAAEEAQSIWTDKFGFSKIKPDELANYRRNCNQFVTFQG 712

Query: 349 TSLLQKPVPKCRIVEKPP 296
           T++L K VP CR++   P
Sbjct: 713 TNMLHKMVPPCRVINNHP 730


>ref|XP_004173768.1| PREDICTED: uncharacterized protein LOC101226716 [Cucumis sativus]
          Length = 135

 Score =  100 bits (250), Expect = 1e-19
 Identities = 46/77 (59%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
 Frame = -3

Query: 526 QSLFSCIERLLGFLSVKTMVLPSAEESKAIWTDKFGFSTVSPDKMSEYKNN-GQMMVFQG 350
           Q+LFSCIERLL FL VK +VLP+AEE+++IWT+KFGF  + PD++S Y+ +  QM+ F+G
Sbjct: 58  QTLFSCIERLLAFLKVKCLVLPAAEEAESIWTEKFGFERIKPDQLSSYRRSCCQMVTFKG 117

Query: 349 TSLLQKPVPKCRIVEKP 299
           TS+LQK VP CR+V  P
Sbjct: 118 TSMLQKTVPSCRVVGAP 134


Top