BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020614
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...   155   2e-36
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...   152   2e-35
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...   152   3e-35
emb|CAB75484.1| putative protein [Arabidopsis thaliana]               151   6e-35
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...   149   2e-34

>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score =  155 bits (393), Expect = 2e-36
 Identities = 79/154 (51%), Positives = 106/154 (68%), Gaps = 1/154 (0%)
 Frame = -2

Query: 460 MLKEIFSPSQSAFVKGRQIFNNIVLAHEIIRTLKR-KRGATGFMVVKLDLSKALEKVEWS 284
           +L  I S SQSAFV GR I +N++LA+EI+  LK  K+GA G   +KLD+SKA ++VEWS
Sbjct: 109 ILPNIISNSQSAFVPGRLITDNVLLAYEIVHHLKSIKKGAGGLAAIKLDMSKAYDRVEWS 168

Query: 283 FLLDTLESFGFCDKWRE*IKQCISTATYSFKLNGSPTGFVQPERGIRQGDPLSPFLFIIC 104
           FL + +   GF +KW + I +C++T TY  K+N S T  + P+RG+RQGDPLSP+LFIIC
Sbjct: 169 FLENMMRKMGFDEKWVQLIMKCVTTVTYKIKVNDSYTQKIFPQRGLRQGDPLSPYLFIIC 228

Query: 103 VEVLSRLIIKAEANNFIHGIKTSRGDSPISHLLF 2
            E LS ++ KAE    I GIK  RG   ++HL F
Sbjct: 229 AEGLSAMLQKAEQKGKIEGIKICRGAPKVNHLFF 262


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/153 (47%), Positives = 107/153 (69%), Gaps = 1/153 (0%)
 Frame = -2

Query: 457  LKEIFSPSQSAFVKGRQIFNNIVLAHEIIRTLKRKRGA-TGFMVVKLDLSKALEKVEWSF 281
            L ++ S SQ+AFV G+ I +N+++AHE++ +LK +R   +G++ VK D+SKA ++VEW+F
Sbjct: 891  LGDVISDSQAAFVPGQNISDNVLVAHELLHSLKSRRECQSGYVAVKTDISKAYDRVEWNF 950

Query: 280  LLDTLESFGFCDKWRE*IKQCISTATYSFKLNGSPTGFVQPERGIRQGDPLSPFLFIICV 101
            L   +   GF  +W + I  C+++ +Y   +NGSP G + P RGIRQGDPLSP+LF+ C 
Sbjct: 951  LEKVMIQLGFAPRWVKWIMTCVTSVSYEVLINGSPYGKIFPSRGIRQGDPLSPYLFLFCA 1010

Query: 100  EVLSRLIIKAEANNFIHGIKTSRGDSPISHLLF 2
            EVLS ++ KAE N  IHG+K ++    ISHLLF
Sbjct: 1011 EVLSNMLRKAEVNKQIHGMKITKDCLAISHLLF 1043


>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
           gi|7267666|emb|CAB78094.1| RNA-directed DNA
           polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score =  152 bits (384), Expect = 3e-35
 Identities = 76/154 (49%), Positives = 104/154 (67%), Gaps = 2/154 (1%)
 Frame = -2

Query: 457 LKEIFSPSQSAFVKGRQIFNNIVLAHEIIRTLKRKRGATGF--MVVKLDLSKALEKVEWS 284
           L E+ S  QSAFV GR I +N+++ HEI+  L R  GA  +  M +K D+SKA ++++W+
Sbjct: 470 LSELISLHQSAFVPGRAIADNVLITHEILHFL-RVSGAKKYCSMAIKTDMSKAYDRIKWN 528

Query: 283 FLLDTLESFGFCDKWRE*IKQCISTATYSFKLNGSPTGFVQPERGIRQGDPLSPFLFIIC 104
           FL + L   GF DKW   + QC+ T +YSF +NGSP G V P RG+RQGDPLSP+LFI+C
Sbjct: 529 FLQEVLMRLGFHDKWIRWVMQCVCTVSYSFLINGSPQGSVVPSRGLRQGDPLSPYLFILC 588

Query: 103 VEVLSRLIIKAEANNFIHGIKTSRGDSPISHLLF 2
            EVLS L  KA+    + GI+ +RG   ++HLLF
Sbjct: 589 TEVLSGLCRKAQEKGVMVGIRVARGSPQVNHLLF 622


>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
          Length = 851

 Score =  151 bits (381), Expect = 6e-35
 Identities = 75/153 (49%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
 Frame = -2

Query: 457 LKEIFSPSQSAFVKGRQIFNNIVLAHEIIRTLK-RKRGATGFMVVKLDLSKALEKVEWSF 281
           L  I S SQ+AF+ GR I +N+++AHEI+ +LK RKR +  +M VK D+SKA ++VEW F
Sbjct: 150 LNSIVSDSQAAFIPGRIINDNVMIAHEIMHSLKVRKRVSKTYMAVKTDVSKAYDRVEWDF 209

Query: 280 LLDTLESFGFCDKWRE*IKQCISTATYSFKLNGSPTGFVQPERGIRQGDPLSPFLFIICV 101
           L  T+  FGFCDKW   I   + +  YS  +NGSP G++ P RGIRQGDPLSP+LFI+C 
Sbjct: 210 LETTMRLFGFCDKWIGWIMAAVKSVHYSVLINGSPHGYISPTRGIRQGDPLSPYLFILCG 269

Query: 100 EVLSRLIIKAEANNFIHGIKTSRGDSPISHLLF 2
           ++LS LI    ++  I G++   G   I+HL F
Sbjct: 270 DILSHLIKVKASSGDIRGVRIGNGAPAITHLQF 302


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score =  149 bits (376), Expect = 2e-34
 Identities = 72/154 (46%), Positives = 102/154 (66%), Gaps = 1/154 (0%)
 Frame = -2

Query: 460  MLKEIFSPSQSAFVKGRQIFNNIVLAHEIIRTLKRKR-GATGFMVVKLDLSKALEKVEWS 284
            +L ++ SP+QSAFV GR I +NI++A+E+   ++ KR G  G+   KLD+SKA ++VEWS
Sbjct: 729  ILPDVISPAQSAFVPGRLISDNILIAYEMTHYMRNKRSGQVGYAAFKLDMSKAYDRVEWS 788

Query: 283  FLLDTLESFGFCDKWRE*IKQCISTATYSFKLNGSPTGFVQPERGIRQGDPLSPFLFIIC 104
            FL D +   GF   W   I +C+ST TY  ++NG  +    PERG+RQGDPLSP+LF++C
Sbjct: 789  FLHDMMLKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPERGLRQGDPLSPYLFLLC 848

Query: 103  VEVLSRLIIKAEANNFIHGIKTSRGDSPISHLLF 2
             E  S L+ K E    +HGI+  +G   +SHLLF
Sbjct: 849  AEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLF 882