BLASTX nr result

ID: Cimicifuga21_contig00020594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020594
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301875.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002333972.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
emb|CBI19683.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_002339321.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002510369.1| conserved hypothetical protein [Ricinus comm...    60   1e-07

>ref|XP_002301875.1| predicted protein [Populus trichocarpa] gi|222843601|gb|EEE81148.1|
            predicted protein [Populus trichocarpa]
          Length = 1846

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 39/97 (40%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
 Frame = -3

Query: 376  QVQAHTSQDAFTAGFATLPSQVPKDVGYIVSSEASLPRVPHQFFGNTTHQEGWDSLPEQF 197
            Q+     QD  T     LP QV  DV Y V+SEAS   +PHQ FGN   Q+ W + P + 
Sbjct: 997  QLPVSNVQDEHTTSLLNLPPQVTHDVTYNVNSEASSLHLPHQMFGNVNLQKSWGTSPGKL 1056

Query: 196  GDIQPKDLLITPVMADGMPSPD-MEKFTQSADILKEP 89
            GDI PK+ L      D  P P  M K +  A +  EP
Sbjct: 1057 GDIHPKESLPASPFVDSSPLPGRMNKSSHEASVASEP 1093


>ref|XP_002333972.1| predicted protein [Populus trichocarpa] gi|222839392|gb|EEE77729.1|
           predicted protein [Populus trichocarpa]
          Length = 885

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 39/97 (40%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
 Frame = -3

Query: 376 QVQAHTSQDAFTAGFATLPSQVPKDVGYIVSSEASLPRVPHQFFGNTTHQEGWDSLPEQF 197
           Q+     QD  T     LP QV  DV Y V+SEAS   +PHQ FGN   Q+ W + P + 
Sbjct: 47  QLPVSNVQDEHTTSLLNLPPQVTHDVTYNVNSEASSLHLPHQMFGNVNLQKSWGTSPGKL 106

Query: 196 GDIQPKDLLITPVMADGMPSPD-MEKFTQSADILKEP 89
           GDI PK+ L      D  P P  M K +  A +  EP
Sbjct: 107 GDIHPKESLPASPFVDSSPLPGRMNKSSHEASVASEP 143


>emb|CBI19683.3| unnamed protein product [Vitis vinifera]
          Length = 1655

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 51/168 (30%), Positives = 73/168 (43%), Gaps = 43/168 (25%)
 Frame = -3

Query: 376  QVQAHTSQDAFTAGFATLPSQVPKDVGYIVSSEASLPRVPHQFFGNTTHQEGWDS-LPEQ 200
            Q+     QD      A+ P  + +D  Y VSSE S   +PHQ FGNTTHQ+ + + LPEQ
Sbjct: 1001 QMPVPAMQDERATNLASGPPPISQDANYNVSSEGSFLHLPHQMFGNTTHQKSYGTMLPEQ 1060

Query: 199  FGDIQPKD--------------------------LLITPVMADGMPSPDMEKFTQSADIL 98
              +IQ K+                          L  + + +DG  + ++EK  Q   I+
Sbjct: 1061 IDEIQQKEPLPASAVIDSSALLLSTNLSTEEPSALQNSTLTSDGQAAENLEKNLQDTLII 1120

Query: 97   KEPRHL----------------KKQFDSEPVLAKEVKSVEVQGVEKVS 2
             EP  +                K++ + EP L  E KSVEV+ V K S
Sbjct: 1121 NEPVTVANSVQLDVTPEELQIEKERCNDEPSLETESKSVEVREVRKAS 1168


>ref|XP_002339321.1| predicted protein [Populus trichocarpa] gi|222874863|gb|EEF11994.1|
           predicted protein [Populus trichocarpa]
          Length = 259

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/97 (37%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
 Frame = -3

Query: 376 QVQAHTSQDAFTAGFATLPSQVPKDVGYIVSSEASLPRVPHQFFGNTTHQEGWDSLPEQF 197
           Q+     QD  T  F  LP QV  DV   V+SE S   +PHQ  GN   Q+ W ++P + 
Sbjct: 107 QLPVSNVQDEHTTSFLNLPPQVNPDVTCNVNSETSSLHLPHQVLGNANLQKSWGTIPGKI 166

Query: 196 GDIQPKDLLITPVMADGMPSPD-MEKFTQSADILKEP 89
            +I  KD L      D  P P  M K TQ + +  EP
Sbjct: 167 SEIHQKDSLPASPFVDSSPLPRLMNKSTQKSSLAPEP 203


>ref|XP_002510369.1| conserved hypothetical protein [Ricinus communis]
            gi|223551070|gb|EEF52556.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1798

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 41/123 (33%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
 Frame = -3

Query: 376  QVQAHTSQDAFTAGFATLPSQVPKDVGYIVSSEASLPRVPHQFFGNTTHQEGWD-SLPEQ 200
            Q+     QD  TA    L +QV + VGY V+SEAS  + PHQ  GN   Q  WD +LP+Q
Sbjct: 966  QIPVSNLQDEHTASLMNLHAQVTQGVGYNVNSEASSFQFPHQMLGNVNGQNNWDTTLPQQ 1025

Query: 199  FGDIQPKDLLITPVMADGMPSPDMEKFTQSADILKEP--RHLKKQFDSEPVLAKEVKSVE 26
              +I  + LL   +   GM    M+K +Q +  + EP      ++   +    +E+  V 
Sbjct: 1026 ISEIHQESLLAPSL---GM----MDKSSQESSSMHEPILPLSAERISEDSWRTEEIPEVA 1078

Query: 25   VQG 17
            +QG
Sbjct: 1079 IQG 1081


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