BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020588
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150631.1| PREDICTED: photosystem I reaction center sub...    72   5e-11
ref|XP_004145485.1| PREDICTED: photosystem I reaction center sub...    72   5e-11
ref|XP_002516419.1| Photosystem I reaction center subunit III, c...    71   8e-11
sp|P46486.1|PSAF_FLATR RecName: Full=Photosystem I reaction cent...    68   7e-10
sp|P12355.1|PSAF_SPIOL RecName: Full=Photosystem I reaction cent...    67   1e-09

>ref|XP_004150631.1| PREDICTED: photosystem I reaction center subunit III,
           chloroplastic-like [Cucumis sativus]
           gi|449487680|ref|XP_004157747.1| PREDICTED: photosystem
           I reaction center subunit III, chloroplastic-like
           [Cucumis sativus]
          Length = 224

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 49/128 (38%), Positives = 58/128 (45%), Gaps = 1/128 (0%)
 Frame = -3

Query: 383 LSISTNLYKPISNPKLNSQFTAKPK-LASIVCXXXXXXXXXXXXXXXXXXXXXXXXXXXX 207
           L+I TNL KP+  PK +S    KPK  +SI+C                            
Sbjct: 3   LTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSSILL 62

Query: 206 XXXXXXXXXXXXXXXXADIAGLTPCKDSKQFAKRXXXXXXXXXXXXXLYAPDSAPALAIK 27
                            DI+GLTPCK+SKQFAKR              YAPDSAPALAIK
Sbjct: 63  SAPLPAVA---------DISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIK 113

Query: 26  ATMEKTKK 3
           AT+EKTK+
Sbjct: 114 ATIEKTKR 121


>ref|XP_004145485.1| PREDICTED: photosystem I reaction center subunit III,
           chloroplastic-like [Cucumis sativus]
          Length = 204

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 49/128 (38%), Positives = 58/128 (45%), Gaps = 1/128 (0%)
 Frame = -3

Query: 383 LSISTNLYKPISNPKLNSQFTAKPK-LASIVCXXXXXXXXXXXXXXXXXXXXXXXXXXXX 207
           L+I TNL KP+  PK +S    KPK  +SI+C                            
Sbjct: 3   LTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSSILL 62

Query: 206 XXXXXXXXXXXXXXXXADIAGLTPCKDSKQFAKRXXXXXXXXXXXXXLYAPDSAPALAIK 27
                            DI+GLTPCK+SKQFAKR              YAPDSAPALAIK
Sbjct: 63  SAPLPAVA---------DISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIK 113

Query: 26  ATMEKTKK 3
           AT+EKTK+
Sbjct: 114 ATIEKTKR 121


>ref|XP_002516419.1| Photosystem I reaction center subunit III, chloroplast precursor,
           putative [Ricinus communis] gi|223544454|gb|EEF45974.1|
           Photosystem I reaction center subunit III, chloroplast
           precursor, putative [Ricinus communis]
          Length = 225

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 50/127 (39%), Positives = 58/127 (45%)
 Frame = -3

Query: 383 LSISTNLYKPISNPKLNSQFTAKPKLASIVCXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 204
           L+I +NL KP+  PKL S  T  P+ + IVC                             
Sbjct: 3   LTIPSNLSKPMLKPKLGSSLT--PRSSMIVCSASQTPSTQEKDSSKSPLQAFSAALALSS 60

Query: 203 XXXXXXXXXXXXXXXADIAGLTPCKDSKQFAKRXXXXXXXXXXXXXLYAPDSAPALAIKA 24
                           DI+GLTPCKDSKQFAKR             LYAPDSAPALAIKA
Sbjct: 61  ILLSAPLPAVA-----DISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPDSAPALAIKA 115

Query: 23  TMEKTKK 3
           T+EKTK+
Sbjct: 116 TVEKTKR 122


>sp|P46486.1|PSAF_FLATR RecName: Full=Photosystem I reaction center subunit III,
           chloroplastic; AltName: Full=Light-harvesting complex I
           17 kDa protein; AltName: Full=PSI-F; Flags: Precursor
           gi|168173|gb|AAA33344.1| photosystem I subunit III
           [Flaveria trinervia] gi|298482|gb|AAB25669.1|
           photosystem I reaction center subunit III, PSI-RC PsaF
           [Flaveria trinervia, Peptide, 232 aa]
          Length = 232

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/51 (68%), Positives = 38/51 (74%)
 Frame = -3

Query: 155 DIAGLTPCKDSKQFAKRXXXXXXXXXXXXXLYAPDSAPALAIKATMEKTKK 3
           DI+GLTPCK+SKQFAKR             LYAPDSAPALAIKATMEKTK+
Sbjct: 79  DISGLTPCKESKQFAKREKQSLKKLESSLKLYAPDSAPALAIKATMEKTKR 129


>sp|P12355.1|PSAF_SPIOL RecName: Full=Photosystem I reaction center subunit III,
           chloroplastic; AltName: Full=Light-harvesting complex I
           17 kDa protein; AltName: Full=PSI-F; Flags: Precursor
           gi|268612149|pdb|2WSC|F Chain F, Improved Model Of Plant
           Photosystem I gi|268612167|pdb|2WSE|F Chain F, Improved
           Model Of Plant Photosystem I gi|268612185|pdb|2WSF|F
           Chain F, Improved Model Of Plant Photosystem I
           gi|21303|emb|CAA31523.1| PSI subunit IV preprotein (AA
           -77 to 154) [Spinacia oleracea] gi|226166|prf||1413236A
           photosystem I reaction center IV
          Length = 231

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/51 (70%), Positives = 37/51 (72%)
 Frame = -3

Query: 155 DIAGLTPCKDSKQFAKRXXXXXXXXXXXXXLYAPDSAPALAIKATMEKTKK 3
           DIAGLTPCK+SKQFAKR             LYA DSAPALAIKATMEKTKK
Sbjct: 78  DIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIKATMEKTKK 128