BLASTX nr result

ID: Cimicifuga21_contig00020570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020570
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519708.1| DNA-binding protein MNB1B, putative [Ricinus...   141   6e-32
gb|AFK35597.1| unknown [Lotus japonicus]                              140   8e-32
ref|XP_004134634.1| PREDICTED: high mobility group B protein 14-...   140   1e-31
ref|XP_002275908.1| PREDICTED: high mobility group B protein 14 ...   140   1e-31
ref|XP_002305996.1| high mobility group family [Populus trichoca...   139   2e-31

>ref|XP_002519708.1| DNA-binding protein MNB1B, putative [Ricinus communis]
           gi|223541125|gb|EEF42681.1| DNA-binding protein MNB1B,
           putative [Ricinus communis]
          Length = 198

 Score =  141 bits (355), Expect = 6e-32
 Identities = 65/80 (81%), Positives = 70/80 (87%)
 Frame = +1

Query: 1   DRNKPKKPPTAFFYFLEDFRKEFQLQNPKVKSMRDVGKACGEKWNTMRYEEKFKYYDIAT 180
           D  KPKKPPTAFFYFLEDFRK+FQ QNP VKSMR++GKACGEKW  M YEEK KYYDIAT
Sbjct: 106 DSKKPKKPPTAFFYFLEDFRKDFQKQNPDVKSMREIGKACGEKWKMMTYEEKVKYYDIAT 165

Query: 181 EKRAEFDEAMAEYERKKASG 240
           EKRAEFD+AMAEY +KK SG
Sbjct: 166 EKRAEFDKAMAEYIKKKESG 185


>gb|AFK35597.1| unknown [Lotus japonicus]
          Length = 162

 Score =  140 bits (354), Expect = 8e-32
 Identities = 63/79 (79%), Positives = 69/79 (87%)
 Frame = +1

Query: 1   DRNKPKKPPTAFFYFLEDFRKEFQLQNPKVKSMRDVGKACGEKWNTMRYEEKFKYYDIAT 180
           D NKPKKPPTAFFYFLEDFRKEFQ+QNP VK+MRD+GK+CGEKW TM YEEK +YYDIAT
Sbjct: 66  DANKPKKPPTAFFYFLEDFRKEFQVQNPDVKTMRDIGKSCGEKWKTMTYEEKVQYYDIAT 125

Query: 181 EKRAEFDEAMAEYERKKAS 237
           EKRAEFD AM EY +K  S
Sbjct: 126 EKRAEFDRAMTEYNKKMVS 144


>ref|XP_004134634.1| PREDICTED: high mobility group B protein 14-like [Cucumis sativus]
           gi|449505924|ref|XP_004162605.1| PREDICTED: high
           mobility group B protein 14-like [Cucumis sativus]
          Length = 161

 Score =  140 bits (353), Expect = 1e-31
 Identities = 64/80 (80%), Positives = 71/80 (88%)
 Frame = +1

Query: 1   DRNKPKKPPTAFFYFLEDFRKEFQLQNPKVKSMRDVGKACGEKWNTMRYEEKFKYYDIAT 180
           D NKPKKPPTAFFYFL+DFRKEFQ QNP VK+MRDVGKACGEKW TM YEEK +YYDIAT
Sbjct: 69  DVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTMTYEEKVQYYDIAT 128

Query: 181 EKRAEFDEAMAEYERKKASG 240
           EKRAEFD+AM EY+++  SG
Sbjct: 129 EKRAEFDKAMTEYKKRMESG 148


>ref|XP_002275908.1| PREDICTED: high mobility group B protein 14 [Vitis vinifera]
           gi|297740668|emb|CBI30850.3| unnamed protein product
           [Vitis vinifera]
          Length = 175

 Score =  140 bits (352), Expect = 1e-31
 Identities = 64/80 (80%), Positives = 70/80 (87%)
 Frame = +1

Query: 1   DRNKPKKPPTAFFYFLEDFRKEFQLQNPKVKSMRDVGKACGEKWNTMRYEEKFKYYDIAT 180
           D  KPKKPPTAFFYFLEDFRKEFQ QNP VKSMRD+GKACGEKW TM YEEK +YYDIAT
Sbjct: 84  DSKKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIAT 143

Query: 181 EKRAEFDEAMAEYERKKASG 240
           EKRAEFD AMA+Y +++ SG
Sbjct: 144 EKRAEFDRAMADYIKRQESG 163


>ref|XP_002305996.1| high mobility group family [Populus trichocarpa]
           gi|222848960|gb|EEE86507.1| high mobility group family
           [Populus trichocarpa]
          Length = 165

 Score =  139 bits (351), Expect = 2e-31
 Identities = 65/80 (81%), Positives = 69/80 (86%)
 Frame = +1

Query: 1   DRNKPKKPPTAFFYFLEDFRKEFQLQNPKVKSMRDVGKACGEKWNTMRYEEKFKYYDIAT 180
           D  KPKKPPTAFFYFLEDFRKEFQ QNP VKSMR+VGKACGEKW TM YEEK KYYDIAT
Sbjct: 73  DAKKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMREVGKACGEKWKTMTYEEKVKYYDIAT 132

Query: 181 EKRAEFDEAMAEYERKKASG 240
           EKRAEFD A +EY ++K SG
Sbjct: 133 EKRAEFDRATSEYIKRKESG 152


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