BLASTX nr result

ID: Cimicifuga21_contig00020569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020569
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333828.1| BED finger-nbs resistance protein [Populus t...    63   4e-08
ref|XP_002317520.1| nbs-lrr resistance protein [Populus trichoca...    62   7e-08
emb|CAN61769.1| hypothetical protein VITISV_026771 [Vitis vinifera]    61   1e-07
emb|CBI20163.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002283439.2| PREDICTED: probable disease resistance prote...    60   3e-07

>ref|XP_002333828.1| BED finger-nbs resistance protein [Populus trichocarpa]
            gi|222838647|gb|EEE77012.1| BED finger-nbs resistance
            protein [Populus trichocarpa]
          Length = 1153

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 57/182 (31%), Positives = 85/182 (46%), Gaps = 7/182 (3%)
 Frame = +2

Query: 17   VIPKLSHLENFSMFKSRCKWSSETAGLGRRAGLEEITNFKRLANLGISFQDLSSFSSYVN 196
            +IPKL  L+   +  S     SET    +    EE+   KRL  L  +F DL  FS YV 
Sbjct: 615  IIPKLCRLQVLGVLLS-----SETQVTLKG---EEVACLKRLEALECNFCDLIDFSKYVK 666

Query: 197  S-KHWKVLRSYHLGVGQ-LSSFAPISKG--NYSVEIQGCNLVSERSSIVLPENTLQLALQ 364
            S +  +  R+Y+  VG  + S + I K   N +V +  C++  E   + LP+    L + 
Sbjct: 667  SWEDTQPPRAYYFIVGPAVPSLSGIHKTELNNTVRLCNCSINREADFVTLPKTIQALEIV 726

Query: 365  GCHDIPRLSKLPCMSKLSELKECYISRCNSME---YIAVAEENTLPCLDRLVLRKLRNLV 535
             CHD+  L  +  M    +LK   I  CN +E    ++    +TL  L+ L L  L+NL 
Sbjct: 727  QCHDMTSLCAVSSMKHAIKLKSLVIWDCNGIECLLSLSSISADTLQSLETLCLSSLKNLC 786

Query: 536  AL 541
             L
Sbjct: 787  GL 788


>ref|XP_002317520.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222860585|gb|EEE98132.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 802

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 57/182 (31%), Positives = 85/182 (46%), Gaps = 7/182 (3%)
 Frame = +2

Query: 17  VIPKLSHLENFSMFKSRCKWSSETAGLGRRAGLEEITNFKRLANLGISFQDLSSFSSYVN 196
           ++PKL  L+       R   SSET    +    EE+   KRL  L  +F DL  FS YV 
Sbjct: 469 ILPKLCRLQVL-----RVLLSSETQVTLKG---EEVACLKRLEALECNFCDLIDFSKYVK 520

Query: 197 S-KHWKVLRSYHLGVGQ-LSSFAPISKG--NYSVEIQGCNLVSERSSIVLPENTLQLALQ 364
           S +  +  R+Y+  VG  + S + I K   N +V +  C++  E   + LP+    L + 
Sbjct: 521 SWEDTQPPRAYYFIVGPAVPSLSGIHKTELNNTVRLCNCSINIEADFVTLPKTIQALEIV 580

Query: 365 GCHDIPRLSKLPCMSKLSELKECYISRCNSME---YIAVAEENTLPCLDRLVLRKLRNLV 535
            CHD+  L  +  M    +LK   I  CN +E    ++    +TL  L+ L L  L+NL 
Sbjct: 581 QCHDMTSLCAVSSMKHAIKLKSLVIWDCNGIECLLSLSSISADTLQSLETLCLSSLKNLC 640

Query: 536 AL 541
            L
Sbjct: 641 GL 642


>emb|CAN61769.1| hypothetical protein VITISV_026771 [Vitis vinifera]
          Length = 1052

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
 Frame = +2

Query: 110  GLEEITNFKRLANLGISFQDLSSFSSYVNSKHWKVLRSYHLGVGQLSSFAPISKGNY--S 283
            G+EE++  + L  L + F  L +F+SY+ +KH + L  Y +G+  L  F    + ++   
Sbjct: 595  GVEELSGLRNLEILDVKFSSLHNFNSYMRTKHCQRLTHYRVGLNGLRYFTG-DEFHFCKE 653

Query: 284  VEIQGCNLVSERSS----IVLPENTLQLALQGCHDIPR--LSKLPCMSKLSELKECYISR 445
            V +  C L   + +    +VLP N     ++ CH +P   L     +   ++LK C ISR
Sbjct: 654  VTVGACKLEGGKDNDDYHLVLPTNVQLFQIRECH-LPTGLLDVSQSLKMATDLKACLISR 712

Query: 446  CNSMEYIAVAEENTLPCLDRLVLRKLRNLVAL 541
            C  +EY+  + E+ +  L+ L L +L++L  L
Sbjct: 713  CEGIEYL-WSVEDCITSLNSLFLGELQSLRVL 743


>emb|CBI20163.3| unnamed protein product [Vitis vinifera]
          Length = 984

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
 Frame = +2

Query: 110  GLEEITNFKRLANLGISFQDLSSFSSYVNSKHWKVLRSYHLGVG--QLSSFAPISKGNY- 280
            G+EE++  ++L  L ++F  L +F+SY+ ++H++ L  Y + +   + S      +  + 
Sbjct: 634  GVEELSGLRKLEVLDVNFSSLHNFNSYMKTQHYRRLTHYRVRLSGREYSRLLGSQRNRHG 693

Query: 281  ---SVEIQGCNLV-----SERSSIVLPENTLQLALQGCHDIPRLSKL-PCMSKLSELKEC 433
                VE+  C L      ++   +VLP N   L +  C+D   L  + P +   ++LK C
Sbjct: 694  FCKEVEVWECKLTEGGKDNDDYQLVLPTNVQFLQIYTCNDPTSLLDVSPSLKIATDLKAC 753

Query: 434  YISRCNSMEYIAVAEENTLPCLDRLVLRKLRNLVALL 544
             IS+C  ++Y+         CL  L + K  NL  LL
Sbjct: 754  LISKCEGIKYL---------CLKHLYVSKCHNLKHLL 781


>ref|XP_002283439.2| PREDICTED: probable disease resistance protein At4g27220-like [Vitis
            vinifera]
          Length = 1276

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 41/151 (27%), Positives = 79/151 (52%), Gaps = 8/151 (5%)
 Frame = +2

Query: 113  LEEITNFKRLANLGISFQDLSSFSSYVNSKHWKVLRSYHLGVGQLSSFAPISKGNYSVE- 289
            +EE++  ++L  + + F  L +F+SY+ ++H++ L  Y +G+    +F    K  +  E 
Sbjct: 930  VEELSGLRKLEIVEVKFSGLHNFNSYMRTEHYRRLTHYCVGLNGFGTFRG-KKNEFCKEV 988

Query: 290  -IQGCNLVSERSS----IVLPENTLQLALQGCHDIPR--LSKLPCMSKLSELKECYISRC 448
             ++ CNL   + +    +VLP N     ++ CH +P   L     +   ++LK C IS+C
Sbjct: 989  IVKSCNLEGGKDNDDYQLVLPTNVQFFKIEKCH-LPTGLLDVSQSLKMATDLKACLISKC 1047

Query: 449  NSMEYIAVAEENTLPCLDRLVLRKLRNLVAL 541
              +EY+  + E+ +  L+ L L+ L +L  L
Sbjct: 1048 KGIEYL-WSVEDCIASLNWLFLKDLPSLRVL 1077


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