BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020566
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515972.1| pentatricopeptide repeat-containing protein,...   167   1e-39
ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containi...   159   3e-37
ref|XP_004163116.1| PREDICTED: pentatricopeptide repeat-containi...   157   1e-36
ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containi...   157   1e-36
ref|XP_002310070.1| predicted protein [Populus trichocarpa] gi|2...   156   1e-36

>ref|XP_002515972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544877|gb|EEF46392.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 546

 Score =  167 bits (422), Expect = 1e-39
 Identities = 81/107 (75%), Positives = 95/107 (88%)
 Frame = -3

Query: 324 AKCGDMVLAREIFELMPERDVVSWSSLIDGYVKSGDHGEALGVFDTMLHLGFKANDVTMG 145
           AKCG+MVLAR++F+LMP+RDV+SWSSLIDGYVK+GD+G+A+ VFD M   G K N+VTM 
Sbjct: 191 AKCGNMVLARQLFDLMPDRDVLSWSSLIDGYVKNGDYGDAMVVFDKMRVSGPKPNEVTMV 250

Query: 144 SVLCACAHLGALEQGKMMHKYVKDNGLPLTLVLRTSLVDMYAKCGAI 4
           SVLCACAHLGAL++G+MMH YV DN LPLTLVL TSLVDMYAKCGAI
Sbjct: 251 SVLCACAHLGALDKGRMMHHYVIDNKLPLTLVLCTSLVDMYAKCGAI 297



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
 Frame = -3

Query: 324 AKCGDMVLAREIFELMPER--DVVSWSSLIDGYVKSGDHGEALGVFDTMLHLGFKANDVT 151
           AKCG +  A ++F  +P    DV+ W+++I G    G   E+L +F  M  +G K +++T
Sbjct: 292 AKCGAINEAFDVFRGIPAELSDVLLWNAMIGGLATHGLVKESLDLFKEMNFVGVKPDEIT 351

Query: 150 MGSVLCACAHLGALEQGKMMHKYVKDNGLPLTLVLRTSLVDMYAKCGAI 4
             S+L ACAH G +++       +  +G+ L +     +VD+ A+ G I
Sbjct: 352 YLSLLHACAHGGLVKEAWYFFDCLGKHGMTLKIEHYACIVDVMARAGQI 400


>ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Glycine max]
          Length = 548

 Score =  159 bits (401), Expect = 3e-37
 Identities = 74/108 (68%), Positives = 94/108 (87%)
 Frame = -3

Query: 324 AKCGDMVLAREIFELMPERDVVSWSSLIDGYVKSGDHGEALGVFDTMLHLGFKANDVTMG 145
           AKCG+MV+A++ FE M E+DV SWSSLIDGYVK+G++ EA+ +F+ M   G KAN+VTM 
Sbjct: 191 AKCGEMVMAQKAFESMSEKDVRSWSSLIDGYVKAGEYSEAMAIFEKMQSAGPKANEVTMV 250

Query: 144 SVLCACAHLGALEQGKMMHKYVKDNGLPLTLVLRTSLVDMYAKCGAIK 1
           SV CACAH+GALE+G+M++KY+ DNGLPLTLVL+TSLVDMYAKCGAI+
Sbjct: 251 SVSCACAHMGALEKGRMIYKYIVDNGLPLTLVLQTSLVDMYAKCGAIE 298


>ref|XP_004163116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Cucumis sativus]
          Length = 442

 Score =  157 bits (396), Expect = 1e-36
 Identities = 74/107 (69%), Positives = 90/107 (84%)
 Frame = -3

Query: 324 AKCGDMVLAREIFELMPERDVVSWSSLIDGYVKSGDHGEALGVFDTMLHLGFKANDVTMG 145
           AKCGD+ +ARE+F LMPE+DVVSWSSLIDGYVK   +GEA+ +F+ M   G  AN+VT+ 
Sbjct: 190 AKCGDLNMAREVFNLMPEKDVVSWSSLIDGYVKGRVYGEAMALFERMSFDGPMANEVTLV 249

Query: 144 SVLCACAHLGALEQGKMMHKYVKDNGLPLTLVLRTSLVDMYAKCGAI 4
           S LCACAHLGALE G+MMH+Y+ +N LPLT+VL+TSLVDMYAKCGAI
Sbjct: 250 SALCACAHLGALEHGRMMHRYIVENELPLTIVLQTSLVDMYAKCGAI 296


>ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Cucumis sativus]
          Length = 542

 Score =  157 bits (396), Expect = 1e-36
 Identities = 74/107 (69%), Positives = 90/107 (84%)
 Frame = -3

Query: 324 AKCGDMVLAREIFELMPERDVVSWSSLIDGYVKSGDHGEALGVFDTMLHLGFKANDVTMG 145
           AKCGD+ +ARE+F LMPE+DVVSWSSLIDGYVK   +GEA+ +F+ M   G  AN+VT+ 
Sbjct: 190 AKCGDLNMAREVFNLMPEKDVVSWSSLIDGYVKGRVYGEAMALFERMSFDGPMANEVTLV 249

Query: 144 SVLCACAHLGALEQGKMMHKYVKDNGLPLTLVLRTSLVDMYAKCGAI 4
           S LCACAHLGALE G+MMH+Y+ +N LPLT+VL+TSLVDMYAKCGAI
Sbjct: 250 SALCACAHLGALEHGRMMHRYIVENELPLTIVLQTSLVDMYAKCGAI 296


>ref|XP_002310070.1| predicted protein [Populus trichocarpa] gi|222852973|gb|EEE90520.1|
           predicted protein [Populus trichocarpa]
          Length = 438

 Score =  156 bits (395), Expect = 1e-36
 Identities = 74/108 (68%), Positives = 91/108 (84%)
 Frame = -3

Query: 324 AKCGDMVLAREIFELMPERDVVSWSSLIDGYVKSGDHGEALGVFDTMLHLGFKANDVTMG 145
           AKCG + LAR +F+LMPERDV SWS LIDGY KSG++G+A+ VF+ M   G KAN+VTM 
Sbjct: 87  AKCGYLDLARGLFDLMPERDVRSWSCLIDGYAKSGNYGDAMAVFEKMRTSGPKANEVTMV 146

Query: 144 SVLCACAHLGALEQGKMMHKYVKDNGLPLTLVLRTSLVDMYAKCGAIK 1
           SVLCACAHLGAL++G+MMH+Y+ DNG  L LVLRTSL+DMYAKCGA++
Sbjct: 147 SVLCACAHLGALDKGRMMHQYLVDNGFELNLVLRTSLIDMYAKCGAVE 194