BLASTX nr result

ID: Cimicifuga21_contig00020542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020542
         (1370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523533.1| conserved hypothetical protein [Ricinus comm...   292   2e-76
ref|XP_002324567.1| predicted protein [Populus trichocarpa] gi|2...   288   2e-75
ref|NP_001145235.1| uncharacterized protein LOC100278507 [Zea ma...   259   1e-66
ref|XP_002462593.1| hypothetical protein SORBIDRAFT_02g028710 [S...   252   2e-64
gb|EEC84811.1| hypothetical protein OsI_31881 [Oryza sativa Indi...   248   2e-63

>ref|XP_002523533.1| conserved hypothetical protein [Ricinus communis]
            gi|223537240|gb|EEF38872.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 295

 Score =  292 bits (747), Expect = 2e-76
 Identities = 148/280 (52%), Positives = 198/280 (70%), Gaps = 2/280 (0%)
 Frame = +2

Query: 356  TPPPPCIAFTTPSNYADRLSSVLHLRLNPPPLTIWCPTVIVESTSHTQEFIKPYLSVSTL 535
            T   P +AFTTP NYA RLS +L L+   P   +WCPT+I + T  T   +  +L+  ++
Sbjct: 12   TTAKPTVAFTTPQNYASRLSHLLTLKSLTP---LWCPTIITQPTPQTLSSLALHLAPHSI 68

Query: 536  EDFSAIAFTSRTGISAFSEIXXXXXXXXX--TGDTFTISALGKDAELLNTDFVFKLCANP 709
               SAI F SRT I+AFS+            + D   I ALGKDAEL+++ F+  +C++ 
Sbjct: 69   SPISAILFPSRTAITAFSKAICSLATPLLHPSHDAMIIGALGKDAELIDSAFLLNICSSI 128

Query: 710  SRIRVLAPPVATPTALVESLGFGLGRRILCPVPEVIGLDEPPVIPDFLQALASKGWVPVR 889
            +RIR L P  ATP+ LV+SLG G GRR+LC VP+++GL EPPV+PDFL+ L + GWVP+R
Sbjct: 129  NRIRALVPQTATPSGLVQSLGAGGGRRVLCLVPKIVGLKEPPVVPDFLRELEAAGWVPIR 188

Query: 890  VPAYQTRWLGPNCAAPLLQEDRLNAIVFTSTAEVEGLLKSLRELGFEWEEMVRKRWPGLI 1069
            V AY+TRWLGP CA  +++E+ L+ +VFTS+AEVEGLLKSL E  ++W +MV++RWP L+
Sbjct: 189  VDAYETRWLGPTCAEGIVKEEGLDGVVFTSSAEVEGLLKSLSEYRWDW-KMVKQRWPELV 247

Query: 1070 VAAHGPVTAAGAKSLGVSVDVVGSRFGSFDGVVEALTLKL 1189
            VAAHGPVTAAGA+ LGV VDVV  RF SF+GVV+AL  +L
Sbjct: 248  VAAHGPVTAAGAERLGVDVDVVSDRFSSFEGVVDALYSRL 287


>ref|XP_002324567.1| predicted protein [Populus trichocarpa] gi|222866001|gb|EEF03132.1|
            predicted protein [Populus trichocarpa]
          Length = 302

 Score =  288 bits (738), Expect = 2e-75
 Identities = 154/284 (54%), Positives = 194/284 (68%), Gaps = 6/284 (2%)
 Frame = +2

Query: 356  TPPPPCIAFTTPSNYADRLSSVLHLRLNPPPLTIWCPTVIVESTSHTQEFIKPYLSVSTL 535
            T   P +AFTTP NYA RLS +L L+   P   +WCPT+  E T  T   +  +LS  +L
Sbjct: 15   TTNKPTVAFTTPPNYATRLSHLLTLKSFTP---LWCPTITTEPTQQTLSSLALHLSPHSL 71

Query: 536  EDFSAIAFTSRTGISAFSE--IXXXXXXXXXTGDTFTISALGKDAELLNTDFVFKLCANP 709
               SAIAF SRT I+AFS   +           DTF I+ALGKD EL+++ F+   C + 
Sbjct: 72   SLLSAIAFPSRTAITAFSTAALSLTTPLLPPREDTFIIAALGKDVELIDSTFLLTFCGDD 131

Query: 710  -SRIRVLAPPVATPTALVESLGFGLGRRILCPVPEVIGLDEPPVIPDFLQALASKGWVPV 886
             S + VL P +ATP+ LV+ LG G GR++LCPVP V+GL+EPPV+PDFL+ L   GWVP+
Sbjct: 132  ISWVNVLVPTIATPSGLVQLLGTGRGRKVLCPVPRVVGLEEPPVVPDFLRELEGAGWVPI 191

Query: 887  RVPAYQTRWLGPNC---AAPLLQEDRLNAIVFTSTAEVEGLLKSLRELGFEWEEMVRKRW 1057
            RV AY+TRWLGP C      L +   L+A+VFTS+ EVEGLLKSLRE G++W EMVR+RW
Sbjct: 192  RVDAYETRWLGPACGKGVVELSEGGLLDAMVFTSSGEVEGLLKSLREFGWDW-EMVRRRW 250

Query: 1058 PGLIVAAHGPVTAAGAKSLGVSVDVVGSRFGSFDGVVEALTLKL 1189
            P L+VAAHGPVTAAGA+ LGV+VDVV  RF SF GVV+A+  KL
Sbjct: 251  PHLVVAAHGPVTAAGAERLGVTVDVVSGRFDSFQGVVDAVEAKL 294


>ref|NP_001145235.1| uncharacterized protein LOC100278507 [Zea mays]
            gi|195653353|gb|ACG46144.1| hypothetical protein [Zea
            mays] gi|414589847|tpg|DAA40418.1| TPA: hypothetical
            protein ZEAMMB73_114348 [Zea mays]
          Length = 297

 Score =  259 bits (662), Expect = 1e-66
 Identities = 142/278 (51%), Positives = 182/278 (65%), Gaps = 10/278 (3%)
 Frame = +2

Query: 374  IAFTTPSN-----YADRLSSVLHLRLNPPPLTIWCPTVIVESTSHTQEFIKPYLSVSTLE 538
            +AFTTP       Y  RL ++L  R   P   +  PT+ V    H  + ++PYL  S L+
Sbjct: 16   VAFTTPQTGGGGAYGGRLGALLRQRGAHP---VAVPTIAVHP--HDPDRLRPYLLPSALD 70

Query: 539  DFSAIAFTSRTGISAFSEIXXXXXXXXXTGDT--FTISALGKDAELLNTDFVFKLCANP- 709
             F+A+AFTSR+GISAF+                 FT++ALG DA+LL+  F+ +LC +  
Sbjct: 71   PFAALAFTSRSGISAFARALSSSHRPLSHASALPFTVAALGSDADLLDHAFLSRLCGDAG 130

Query: 710  SRIRVLAPPVATPTALVESLGFGLGRRILCPVPEVIGLDEPPVIPDFLQALASKGWVPVR 889
            +R+ VL P V TP  LVE+LG G GRR+LCPVP+V+GL EPPV+PDFL  L + GWV VR
Sbjct: 131  TRVSVLVPDVPTPAGLVEALGRGSGRRVLCPVPDVVGLREPPVVPDFLAGLEAAGWVAVR 190

Query: 890  VPAYQTRWLGPNCAAPLLQEDR--LNAIVFTSTAEVEGLLKSLRELGFEWEEMVRKRWPG 1063
             PAY T W GP CA  L+  D   L+A+VFTSTAEVEGLLK L  +G+ W  +   RWPG
Sbjct: 191  APAYTTCWAGPRCAEALVDPDAAPLDAVVFTSTAEVEGLLKGLEAVGWTWARLA-ARWPG 249

Query: 1064 LIVAAHGPVTAAGAKSLGVSVDVVGSRFGSFDGVVEAL 1177
            ++VAAHGPVTA GA+SLGV VD+V +RF SF GVV+AL
Sbjct: 250  MVVAAHGPVTAGGARSLGVEVDIVSTRFSSFHGVVDAL 287


>ref|XP_002462593.1| hypothetical protein SORBIDRAFT_02g028710 [Sorghum bicolor]
            gi|241925970|gb|EER99114.1| hypothetical protein
            SORBIDRAFT_02g028710 [Sorghum bicolor]
          Length = 299

 Score =  252 bits (643), Expect = 2e-64
 Identities = 143/288 (49%), Positives = 183/288 (63%), Gaps = 13/288 (4%)
 Frame = +2

Query: 374  IAFTTPSN-----YADRLSSVLHLR-LNPPPLTIWCPTVIVESTSHTQEFIKPYLSVSTL 535
            +AFTTP       Y  RL ++L  R  +P P+    PT+ V    H  + ++P+L    L
Sbjct: 16   VAFTTPQTGGGGAYGGRLGALLRQRGAHPVPV----PTIAVHP--HDPDRLRPFLLPGAL 69

Query: 536  EDFSAIAFTSRTGISAFSEIXXXXXXXXXTGDT---FTISALGKDAELLNTDFVFKLC-- 700
            + F+A+AFTSR+GISAF+              +   FT++ALG DA+LL+  F+ +LC  
Sbjct: 70   DPFAALAFTSRSGISAFARALSSSSHHPLADASALPFTVAALGSDADLLDHAFLSRLCGA 129

Query: 701  ANPSRIRVLAPPVATPTALVESLGFGLGRRILCPVPEVIGLDEPPVIPDFLQALASKGWV 880
            A  +R+ VL P V TP  LVE+LG G GRR+LCPVP+V+GL EPPV+PDFL  L + GWV
Sbjct: 130  AAGTRVSVLVPDVPTPAGLVEALGRGSGRRVLCPVPDVVGLREPPVVPDFLAGLEAAGWV 189

Query: 881  PVRVPAYQTRWLGPNCAAPLLQEDR--LNAIVFTSTAEVEGLLKSLRELGFEWEEMVRKR 1054
             VR PAY T W GP CA  L+  D   L+A+VFTSTAEVEGLLK L   G+ W  +   R
Sbjct: 190  AVRAPAYTTCWAGPRCAEALVDPDAAPLDAVVFTSTAEVEGLLKRLESAGWTWARLT-AR 248

Query: 1055 WPGLIVAAHGPVTAAGAKSLGVSVDVVGSRFGSFDGVVEALTLKLGQE 1198
             PG++VAAHGPVTA GA+SLGV VDVV +RF SF GVV+AL      E
Sbjct: 249  CPGMVVAAHGPVTAGGARSLGVEVDVVSARFSSFHGVVDALAATFSSE 296


>gb|EEC84811.1| hypothetical protein OsI_31881 [Oryza sativa Indica Group]
          Length = 301

 Score =  248 bits (634), Expect = 2e-63
 Identities = 137/291 (47%), Positives = 180/291 (61%), Gaps = 20/291 (6%)
 Frame = +2

Query: 374  IAFTTPSN------YADRLSSVLHLR-LNPPPLTIWCPTVIVESTSHTQEFIKPYLSVST 532
            +AFTTP        Y  RL ++L  R   P P+    PT+ + +  H  + ++P+++   
Sbjct: 14   VAFTTPQTDAGGGGYGGRLHAILRQRGARPVPV----PTIAIRA--HDPDILRPFVAPGG 67

Query: 533  LEDFSAIAFTSRTGISAFSEIXXXXXXXXX------------TGDTFTISALGKDAELLN 676
            L+ F+A+AFTSR+GISAFS                       T   FT++ALG DA+LL+
Sbjct: 68   LDAFAALAFTSRSGISAFSRALLPSSSSSPARRPRHPVSDAATALPFTVAALGSDADLLD 127

Query: 677  TDFVFKLCANPS-RIRVLAPPVATPTALVESLGFGLGRRILCPVPEVIGLDEPPVIPDFL 853
              F+ +LC +   R+ VL P V TP  LVE+LG G GRR+LCPVP+V+GL EPPV+P FL
Sbjct: 128  AAFLSRLCGDAGGRVSVLVPDVPTPAGLVEALGSGSGRRVLCPVPDVVGLREPPVVPGFL 187

Query: 854  QALASKGWVPVRVPAYQTRWLGPNCAAPLLQEDRLNAIVFTSTAEVEGLLKSLRELGFEW 1033
              L + GWV VR PAY T W GP CA  L+     +A+VFTSTAEVEGLLK L   G+ W
Sbjct: 188  SGLEAAGWVAVRAPAYVTCWAGPRCAEALVDAAAPDAVVFTSTAEVEGLLKGLDAAGWSW 247

Query: 1034 EEMVRKRWPGLIVAAHGPVTAAGAKSLGVSVDVVGSRFGSFDGVVEALTLK 1186
              + R RWP ++VAAHGPVTA G + LG+ VDVVG+RF SF GV++AL  K
Sbjct: 248  PRL-RARWPRMVVAAHGPVTADGVRRLGIEVDVVGARFSSFHGVLDALAAK 297


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