BLASTX nr result

ID: Cimicifuga21_contig00020536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020536
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39935.1| unknown [Picea sitchensis]                              79   3e-13
ref|XP_001759538.1| predicted protein [Physcomitrella patens sub...    65   4e-09
ref|XP_001751242.1| predicted protein [Physcomitrella patens sub...    65   8e-09
ref|XP_002518498.1| hypothetical protein RCOM_0905070 [Ricinus c...    62   6e-08
ref|XP_003600063.1| hypothetical protein MTR_3g051280 [Medicago ...    61   8e-08

>gb|ACN39935.1| unknown [Picea sitchensis]
          Length = 207

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 6/106 (5%)
 Frame = +2

Query: 29  SSDPKRRHYQDSDVALLPKEITMLGVLPSTENKDFVSAKSVKRSRPSKDESEKI------ 190
           S+  KR   + SD  LLP EIT LGV P  + K        K+ RP+  +          
Sbjct: 15  SAKKKRGRPRKSDTVLLPGEITALGVTPPYDGKS-------KKHRPTDTDGSHSAHGNGS 67

Query: 191 MIGRAITGVVDGVFDAGYVMSVRIGGSESIFRGVVFRPGMLIPPTK 328
           ++G+ + GV+DG FDAGY+++VR+  +++IF GVVF PG+ IPP+K
Sbjct: 68  LVGQPVHGVLDGSFDAGYLITVRVADTDTIFHGVVFGPGLSIPPSK 113


>ref|XP_001759538.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162689077|gb|EDQ75450.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 509

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/69 (49%), Positives = 47/69 (68%)
 Frame = +2

Query: 113 STENKDFVSAKSVKRSRPSKDESEKIMIGRAITGVVDGVFDAGYVMSVRIGGSESIFRGV 292
           ST+ +     K V+ +  S D S   MIG+ +TGV+DG FDAGY++SVR+G S+ I RGV
Sbjct: 262 STKPRKQRKRKGVEVAPASVDVS---MIGQQVTGVLDGTFDAGYLLSVRVGSSDMILRGV 318

Query: 293 VFRPGMLIP 319
           VF PG+ +P
Sbjct: 319 VFGPGLSVP 327


>ref|XP_001751242.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162697223|gb|EDQ83559.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 324

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 31/59 (52%), Positives = 43/59 (72%)
 Frame = +2

Query: 143 KSVKRSRPSKDESEKIMIGRAITGVVDGVFDAGYVMSVRIGGSESIFRGVVFRPGMLIP 319
           K V+ +  S D S   MIG+ +TGV+DG FDAGY++SVR+G S+ + RGVVF PG+ +P
Sbjct: 60  KGVEAAPASVDVS---MIGQQVTGVLDGTFDAGYLLSVRVGNSDVVLRGVVFGPGLSVP 115


>ref|XP_002518498.1| hypothetical protein RCOM_0905070 [Ricinus communis]
           gi|223542343|gb|EEF43885.1| hypothetical protein
           RCOM_0905070 [Ricinus communis]
          Length = 491

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
 Frame = +2

Query: 8   QGMEPSTSSDP---KRRHYQDSDVALLPKEITMLGVLPSTENKDFVSAKSVKRSRPSKDE 178
           QG   S+ +DP   ++R     D +++  E      +P+T      S K  K+S  +   
Sbjct: 6   QGTSSSSPADPPLKRKRGRPRKDESMVQGEN-----MPATATPSADSLKKNKQSVGTAGA 60

Query: 179 SEKIMIGRAITGVVDGVFDAGYVMSVRIGGSESIFRGVVFRPGMLIPPT 325
               M+G+ ++GV++G FDAGY++ V++G +E+  RGVVF PG   P T
Sbjct: 61  VSDEMVGKVVSGVIEGSFDAGYLLKVKVGDTETHLRGVVFLPGRFTPIT 109


>ref|XP_003600063.1| hypothetical protein MTR_3g051280 [Medicago truncatula]
           gi|355489111|gb|AES70314.1| hypothetical protein
           MTR_3g051280 [Medicago truncatula]
          Length = 359

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 23/48 (47%), Positives = 39/48 (81%)
 Frame = +2

Query: 176 ESEKIMIGRAITGVVDGVFDAGYVMSVRIGGSESIFRGVVFRPGMLIP 319
           ES  +M+G+A++GV++ VFDAGY++SVR+G S++  +G+VF+ G  +P
Sbjct: 37  ESNDVMVGQAVSGVIEAVFDAGYLLSVRVGNSDTTLKGLVFKSGHFVP 84


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