BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020527
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17585.3| unnamed protein product [Vitis vinifera]               89   5e-16
ref|XP_002269506.1| PREDICTED: pentatricopeptide repeat-containi...    89   5e-16
ref|XP_003611888.1| Pentatricopeptide repeat-containing protein ...    81   1e-13
ref|XP_002533281.1| pentatricopeptide repeat-containing protein,...    79   4e-13
ref|XP_003538834.1| PREDICTED: pentatricopeptide repeat-containi...    73   2e-11

>emb|CBI17585.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 47/102 (46%), Positives = 64/102 (62%), Gaps = 3/102 (2%)
 Frame = -2

Query: 313 TLDSFVVTHXXXXXXXXXXXXXXXXXXPNFPH---TQNTLQAIAKILAKSHRLTELQTLI 143
           T+DSFVV +                     PH   TQ T++A+AKILAKS R  EL++L+
Sbjct: 65  TVDSFVVANALQSAPSPDSALSLLEILKTIPHFCHTQATIRALAKILAKSQRSAELKSLV 124

Query: 142 DNINAGKFTNVARIRFMDILRWYAIAGDLDSALHVWEDYTLA 17
           D+INAGKF NV RI FM++++W+A AGDL+S LH W  Y ++
Sbjct: 125 DDINAGKFWNV-RISFMELMKWHAAAGDLESVLHAWNRYRVS 165


>ref|XP_002269506.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66631-like [Vitis vinifera]
          Length = 660

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 47/102 (46%), Positives = 64/102 (62%), Gaps = 3/102 (2%)
 Frame = -2

Query: 313 TLDSFVVTHXXXXXXXXXXXXXXXXXXPNFPH---TQNTLQAIAKILAKSHRLTELQTLI 143
           T+DSFVV +                     PH   TQ T++A+AKILAKS R  EL++L+
Sbjct: 65  TVDSFVVANALQSAPSPDSALSLLEILKTIPHFCHTQATIRALAKILAKSQRSAELKSLV 124

Query: 142 DNINAGKFTNVARIRFMDILRWYAIAGDLDSALHVWEDYTLA 17
           D+INAGKF NV RI FM++++W+A AGDL+S LH W  Y ++
Sbjct: 125 DDINAGKFWNV-RISFMELMKWHAAAGDLESVLHAWNRYRVS 165


>ref|XP_003611888.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513223|gb|AES94846.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 659

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/68 (54%), Positives = 53/68 (77%)
 Frame = -2

Query: 229 NFPHTQNTLQAIAKILAKSHRLTELQTLIDNINAGKFTNVARIRFMDILRWYAIAGDLDS 50
           NF HTQNTL A+A +LAKS +L EL++LID+I + +F NV +I FM++++WYA A D+DS
Sbjct: 102 NFSHTQNTLHALATVLAKSGKLVELKSLIDDIESKRFGNV-KISFMNLMQWYAAAKDIDS 160

Query: 49  ALHVWEDY 26
            + VW+ Y
Sbjct: 161 VVRVWDQY 168


>ref|XP_002533281.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526906|gb|EEF29113.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 652

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
 Frame = -2

Query: 310 LDSFVVTHXXXXXXXXXXXXXXXXXXPNFPH---TQNTLQAIAKILAKSHRLTELQTLID 140
           LD FV+TH                   N PH    Q+T+ A+A +LA+S +  EL++L++
Sbjct: 67  LDPFVITHTIRSAPSADSALFLIEILKNIPHFTHNQSTIHALATVLARSCKSFELKSLLN 126

Query: 139 NINAGKFTNVARIRFMDILRWYAIAGDLDSALHVWEDY 26
            IN GK+ NV R+ FM++++WYA  GDLD+ L VW++Y
Sbjct: 127 EINVGKYCNV-RVSFMNLMQWYAAVGDLDAVLDVWDEY 163


>ref|XP_003538834.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66631-like [Glycine max]
          Length = 658

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
 Frame = -2

Query: 310 LDSFVVTHXXXXXXXXXXXXXXXXXXP---NFPHTQNTLQAIAKILAKSHRLTELQTLID 140
           +DSFV TH                      +F HT +TL ++A +LAKS R +EL++L+D
Sbjct: 73  MDSFVATHALRSAPSADSALSFVRALEKSSHFSHTHHTLHSLATVLAKSGRSSELKSLVD 132

Query: 139 NINAGKFTNVARIRFMDILRWYAIAGDLDSALHVWEDYTL 20
           +I A +F +V +I FM++++W+A   DLD+ L VWE Y L
Sbjct: 133 DIRANRFGSV-QISFMNLMQWHAAVRDLDTVLQVWEQYAL 171