BLASTX nr result

ID: Cimicifuga21_contig00020517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020517
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530481.1| conserved hypothetical protein [Ricinus comm...   139   5e-31
ref|XP_002278671.2| PREDICTED: zinc finger protein VAR3, chlorop...   134   1e-29
emb|CAN69472.1| hypothetical protein VITISV_014373 [Vitis vinifera]   134   1e-29
ref|XP_003553723.1| PREDICTED: uncharacterized protein LOC100807...   125   4e-27
ref|XP_004160413.1| PREDICTED: zinc finger protein VAR3, chlorop...   124   9e-27

>ref|XP_002530481.1| conserved hypothetical protein [Ricinus communis]
           gi|223529978|gb|EEF31904.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 365

 Score =  139 bits (349), Expect = 5e-31
 Identities = 55/81 (67%), Positives = 65/81 (80%)
 Frame = +2

Query: 8   DVEMKKGDWTCKQCQFMNFARNIKCLRCQESRPKRELLPGEWECPSCDFLNYRRNKICLK 187
           DVEMK+GDW C +C+FMNFA N  CLRCQE RPKR L PG+WECPSCDFLN+ RN +C K
Sbjct: 284 DVEMKRGDWMCPKCEFMNFASNKSCLRCQEVRPKRPLNPGDWECPSCDFLNFSRNAVCRK 343

Query: 188 CSCDRPRDEVAEYEDQIWRKP 250
           C C+RP+    EYE+QIWR+P
Sbjct: 344 CKCERPKGATTEYEEQIWRRP 364


>ref|XP_002278671.2| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Vitis
           vinifera] gi|297734333|emb|CBI15580.3| unnamed protein
           product [Vitis vinifera]
          Length = 410

 Score =  134 bits (336), Expect = 1e-29
 Identities = 51/81 (62%), Positives = 64/81 (79%)
 Frame = +2

Query: 8   DVEMKKGDWTCKQCQFMNFARNIKCLRCQESRPKRELLPGEWECPSCDFLNYRRNKICLK 187
           D+ MKKGDW C QC FMNFA   +C RC+E RPKR+L PGEWECPSCDF+NYRRN +CLK
Sbjct: 326 DIPMKKGDWNCPQCAFMNFASKTECFRCREPRPKRQLNPGEWECPSCDFVNYRRNTVCLK 385

Query: 188 CSCDRPRDEVAEYEDQIWRKP 250
           C+ D+P++    YE+ +W+KP
Sbjct: 386 CNRDQPKEAATPYEEHVWKKP 406



 Score = 91.7 bits (226), Expect = 8e-17
 Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 6/73 (8%)
 Frame = +2

Query: 8   DVEMKKGDWTCKQCQFMNFARNIKCLRCQESRPKR------ELLPGEWECPSCDFLNYRR 169
           +V+MKKGDW C  C F+NFARN +C++C+E  PKR      E+  G+W CP C+F+N+ R
Sbjct: 248 NVQMKKGDWICPNCNFLNFARNTQCMKCREDGPKRDSLNVIEMKKGDWTCPECNFMNFSR 307

Query: 170 NKICLKCSCDRPR 208
           N  CLKC  + P+
Sbjct: 308 NIRCLKCRAEGPK 320


>emb|CAN69472.1| hypothetical protein VITISV_014373 [Vitis vinifera]
          Length = 317

 Score =  134 bits (336), Expect = 1e-29
 Identities = 51/81 (62%), Positives = 64/81 (79%)
 Frame = +2

Query: 8   DVEMKKGDWTCKQCQFMNFARNIKCLRCQESRPKRELLPGEWECPSCDFLNYRRNKICLK 187
           D+ MKKGDW C QC FMNFA   +C RC+E RPKR+L PGEWECPSCDF+NYRRN +CLK
Sbjct: 233 DIPMKKGDWNCPQCAFMNFASKTECFRCREPRPKRQLNPGEWECPSCDFVNYRRNTVCLK 292

Query: 188 CSCDRPRDEVAEYEDQIWRKP 250
           C+ D+P++    YE+ +W+KP
Sbjct: 293 CNRDQPKEAATPYEEHVWKKP 313



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 48/115 (41%)
 Frame = +2

Query: 8   DVEMKKGDWTCKQCQFMNFARNIKCLRCQESRPKR------ELLPGEWECP--------- 142
           +V+MKKGDW C  C F+NFARN +C++C+E  PKR      E+  G+W CP         
Sbjct: 113 NVQMKKGDWICPNCNFLNFARNTQCMKCREDGPKRDSLNMVEMKKGDWTCPELCVATTLI 172

Query: 143 ---------------------------------SCDFLNYRRNKICLKCSCDRPR 208
                                             C+F+N+ RN  CLKC  + P+
Sbjct: 173 SHLHMMWSLDTLVYDAVFGYCGFIMSTPYIKFNKCNFMNFSRNIRCLKCRAEGPK 227


>ref|XP_003553723.1| PREDICTED: uncharacterized protein LOC100807006 [Glycine max]
          Length = 846

 Score =  125 bits (315), Expect = 4e-27
 Identities = 51/77 (66%), Positives = 59/77 (76%)
 Frame = +2

Query: 5   DDVEMKKGDWTCKQCQFMNFARNIKCLRCQESRPKRELLPGEWECPSCDFLNYRRNKICL 184
           DDVEMKKGDW C +C+FMNFA+N  CL+C   RPKR+LLPGEWECP C+FLNYRRN +C 
Sbjct: 338 DDVEMKKGDWLCPKCEFMNFAKNTVCLQCDAKRPKRQLLPGEWECPECNFLNYRRNMVCF 397

Query: 185 KCSCDRPRDEVAEYEDQ 235
            C C RP DE  E + Q
Sbjct: 398 HCECKRPPDEFLENKMQ 414


>ref|XP_004160413.1| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Cucumis
           sativus]
          Length = 445

 Score =  124 bits (312), Expect = 9e-27
 Identities = 52/85 (61%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
 Frame = +2

Query: 2   VDDVEMKKGDWTCKQCQFMNFARNIKCLRCQESRPKRELLPGEWECPSCDFLNYRRNKIC 181
           V+  EMKKGDW C QC FMNFA N KCLRC+E RPKREL  GEWECP C ++N+R N  C
Sbjct: 350 VEQAEMKKGDWVCPQCSFMNFASNKKCLRCRELRPKRELNRGEWECPMCAYVNFRGNMSC 409

Query: 182 LKCSCDRPRDEVA-EYEDQIWRKPR 253
            KC+ +RP  E++ EYE+Q+W  PR
Sbjct: 410 RKCNAERPEQEISDEYEEQLWESPR 434



 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 9/91 (9%)
 Frame = +2

Query: 8   DVEMKKGDWTCKQCQFMNFARNIKCLRCQESRPKR------ELLPGEWECPSCDFLNYRR 169
           DVEMK+GDW C +C F+NF+RN  CL+C E  PKR      E+  G+W CP C F+N+ R
Sbjct: 274 DVEMKRGDWMCTKCNFLNFSRNRTCLKCNEDGPKRVRENDIEMKSGDWICPECKFMNFSR 333

Query: 170 NKICLKCSCDRPRD---EVAEYEDQIWRKPR 253
           N  C+KC  + P+    E AE +   W  P+
Sbjct: 334 NIRCIKCKTEGPKKVNVEQAEMKKGDWVCPQ 364


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