BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020504
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17913.3| unnamed protein product [Vitis vinifera]              372   e-101
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]     372   e-101
ref|XP_004149513.1| PREDICTED: DNA ligase 4-like [Cucumis sativus]    365   4e-99
ref|XP_002527709.1| DNA ligase IV, putative [Ricinus communis] g...   360   1e-97
ref|XP_003595076.1| DNA ligase [Medicago truncatula] gi|35548412...   356   2e-96

>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
          Length = 1163

 Score =  372 bits (956), Expect = e-101
 Identities = 189/236 (80%), Positives = 204/236 (86%)
 Frame = +1

Query: 22  QRVKFSVLCSMFNWMQXXXXXXXXXXXXXXXLDNFCKTADDYFSAIRLILPSLDRERGTY 201
           +  KFSVLCS+F W+Q               LD FC      FSAIRLILP+LDRERG+Y
Sbjct: 3   EETKFSVLCSLFTWIQRSRTSAKKRSKFRIFLDTFCINGHQ-FSAIRLILPNLDRERGSY 61

Query: 202 GLKESVLATCLIDALGMSRESEDALRLINWRKGGAKTGANVGNFALVASEVLQRRQGLAS 381
           GLKESVLATCLIDALGMSRESEDALRLINWRKGGAKTGAN GNFA+VA+EVLQRRQG+ S
Sbjct: 62  GLKESVLATCLIDALGMSRESEDALRLINWRKGGAKTGANAGNFAMVAAEVLQRRQGMTS 121

Query: 382 GGLTIKELNDLLDRLASSENRAEKIAVLSDLIKKTNAQEMKWIIMIILKDLKLGVSEKSI 561
           GGLTIKELNDLLD LASSENR EK +VLS LIKKTNAQEMKWI+MIILKDLKLG+SEKSI
Sbjct: 122 GGLTIKELNDLLDCLASSENRTEKTSVLSTLIKKTNAQEMKWIVMIILKDLKLGISEKSI 181

Query: 562 FHEFHPDAEDLFNVTCDLKLVCEKLRDRSQRHKRQDIEIGKAVRPQLALRVSDAAA 729
           FHEFHPDAEDLFNVTCDLKLVCEKL+DRSQRHKRQDIE+GKAVRPQLA+RV+DA A
Sbjct: 182 FHEFHPDAEDLFNVTCDLKLVCEKLKDRSQRHKRQDIEVGKAVRPQLAMRVADATA 237


>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
          Length = 1162

 Score =  372 bits (956), Expect = e-101
 Identities = 189/236 (80%), Positives = 204/236 (86%)
 Frame = +1

Query: 22  QRVKFSVLCSMFNWMQXXXXXXXXXXXXXXXLDNFCKTADDYFSAIRLILPSLDRERGTY 201
           +  KFSVLCS+F W+Q               LD FC      FSAIRLILP+LDRERG+Y
Sbjct: 3   EETKFSVLCSLFTWIQRSRTSAKKRSKFRIFLDTFCINGHQ-FSAIRLILPNLDRERGSY 61

Query: 202 GLKESVLATCLIDALGMSRESEDALRLINWRKGGAKTGANVGNFALVASEVLQRRQGLAS 381
           GLKESVLATCLIDALGMSRESEDALRLINWRKGGAKTGAN GNFA+VA+EVLQRRQG+ S
Sbjct: 62  GLKESVLATCLIDALGMSRESEDALRLINWRKGGAKTGANAGNFAMVAAEVLQRRQGMTS 121

Query: 382 GGLTIKELNDLLDRLASSENRAEKIAVLSDLIKKTNAQEMKWIIMIILKDLKLGVSEKSI 561
           GGLTIKELNDLLD LASSENR EK +VLS LIKKTNAQEMKWI+MIILKDLKLG+SEKSI
Sbjct: 122 GGLTIKELNDLLDCLASSENRTEKTSVLSTLIKKTNAQEMKWIVMIILKDLKLGISEKSI 181

Query: 562 FHEFHPDAEDLFNVTCDLKLVCEKLRDRSQRHKRQDIEIGKAVRPQLALRVSDAAA 729
           FHEFHPDAEDLFNVTCDLKLVCEKL+DRSQRHKRQDIE+GKAVRPQLA+RV+DA A
Sbjct: 182 FHEFHPDAEDLFNVTCDLKLVCEKLKDRSQRHKRQDIEVGKAVRPQLAMRVADATA 237


>ref|XP_004149513.1| PREDICTED: DNA ligase 4-like [Cucumis sativus]
          Length = 1214

 Score =  365 bits (938), Expect = 4e-99
 Identities = 188/234 (80%), Positives = 201/234 (85%)
 Frame = +1

Query: 28  VKFSVLCSMFNWMQXXXXXXXXXXXXXXXLDNFCKTADDYFSAIRLILPSLDRERGTYGL 207
           +KF+VL S+F+W+Q               LD FC  +  YFSAIRLILPSLDRERGTYGL
Sbjct: 5   IKFAVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCSPSH-YFSAIRLILPSLDRERGTYGL 63

Query: 208 KESVLATCLIDALGMSRESEDALRLINWRKGGAKTGANVGNFALVASEVLQRRQGLASGG 387
           KESVLATCLIDALGMSR+SEDALRLINWRKGGAKTGAN GNFALVA+EVLQRRQG+  GG
Sbjct: 64  KESVLATCLIDALGMSRDSEDALRLINWRKGGAKTGANAGNFALVAAEVLQRRQGMTPGG 123

Query: 388 LTIKELNDLLDRLASSENRAEKIAVLSDLIKKTNAQEMKWIIMIILKDLKLGVSEKSIFH 567
           LTI ELNDLLDRLAS ENRAEK AVLS LI+KTNAQEMKWI+MI L DLKLGVSEKSIFH
Sbjct: 124 LTINELNDLLDRLASGENRAEKTAVLSTLIQKTNAQEMKWIVMIFLVDLKLGVSEKSIFH 183

Query: 568 EFHPDAEDLFNVTCDLKLVCEKLRDRSQRHKRQDIEIGKAVRPQLALRVSDAAA 729
           EFHPDAEDLFNVTCDLKLVCEKLRDR QRHKRQDIE+GKAVRPQLA RVS+A A
Sbjct: 184 EFHPDAEDLFNVTCDLKLVCEKLRDRRQRHKRQDIEVGKAVRPQLASRVSNANA 237


>ref|XP_002527709.1| DNA ligase IV, putative [Ricinus communis]
           gi|223532899|gb|EEF34668.1| DNA ligase IV, putative
           [Ricinus communis]
          Length = 850

 Score =  360 bits (925), Expect = 1e-97
 Identities = 182/237 (76%), Positives = 202/237 (85%)
 Frame = +1

Query: 13  MGDQRVKFSVLCSMFNWMQXXXXXXXXXXXXXXXLDNFCKTADDYFSAIRLILPSLDRER 192
           M     KFSV+ S+F W+Q               LD FCK  DDYFSAIRLILPSLDRER
Sbjct: 1   MSGNETKFSVMVSLFEWIQKSKYSAKKRSKFRKFLDTFCKP-DDYFSAIRLILPSLDRER 59

Query: 193 GTYGLKESVLATCLIDALGMSRESEDALRLINWRKGGAKTGANVGNFALVASEVLQRRQG 372
           G+YGLKESVLATCL+DAL MSR+S DA+RL NWRKGG KTG+N G+F LVA EVLQRRQG
Sbjct: 60  GSYGLKESVLATCLVDALAMSRDSPDAVRLFNWRKGGPKTGSNAGHFPLVAFEVLQRRQG 119

Query: 373 LASGGLTIKELNDLLDRLASSENRAEKIAVLSDLIKKTNAQEMKWIIMIILKDLKLGVSE 552
            +SGGL+IKELNDLLD+LASSENR EKI+VLS LIKKTNAQEMKW+IMIILKDLKLG+SE
Sbjct: 120 TSSGGLSIKELNDLLDKLASSENRGEKISVLSTLIKKTNAQEMKWLIMIILKDLKLGISE 179

Query: 553 KSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRSQRHKRQDIEIGKAVRPQLALRVSDA 723
           KSIF+EFHPDAEDLFNVTCDLKLVCEKL+D+SQRHKRQDIE+GKAVRPQLA+RVSDA
Sbjct: 180 KSIFNEFHPDAEDLFNVTCDLKLVCEKLKDQSQRHKRQDIEVGKAVRPQLAMRVSDA 236


>ref|XP_003595076.1| DNA ligase [Medicago truncatula] gi|355484124|gb|AES65327.1| DNA
           ligase [Medicago truncatula]
          Length = 1244

 Score =  356 bits (914), Expect = 2e-96
 Identities = 182/232 (78%), Positives = 200/232 (86%)
 Frame = +1

Query: 31  KFSVLCSMFNWMQXXXXXXXXXXXXXXXLDNFCKTADDYFSAIRLILPSLDRERGTYGLK 210
           KFSVLCS+F W Q               LDNFC T  +YF AIRLILP+LDRERG+YGLK
Sbjct: 6   KFSVLCSLFTWTQRTKAPAKKRAKFRKFLDNFC-TDRNYFPAIRLILPNLDRERGSYGLK 64

Query: 211 ESVLATCLIDALGMSRESEDALRLINWRKGGAKTGANVGNFALVASEVLQRRQGLASGGL 390
           ESVLAT LIDALGM+++S DALRL+NWRKGGAKTGAN GNFALVA+EVLQ RQG ASGGL
Sbjct: 65  ESVLATSLIDALGMAKDSHDALRLVNWRKGGAKTGANAGNFALVAAEVLQLRQGTASGGL 124

Query: 391 TIKELNDLLDRLASSENRAEKIAVLSDLIKKTNAQEMKWIIMIILKDLKLGVSEKSIFHE 570
           TIKELNDLLD+L+SSENR EK  VLS LI+KTNA EMKWIIMIILKDLKLG+SE+SIFHE
Sbjct: 125 TIKELNDLLDQLSSSENRGEKTLVLSTLIQKTNALEMKWIIMIILKDLKLGISERSIFHE 184

Query: 571 FHPDAEDLFNVTCDLKLVCEKLRDRSQRHKRQDIEIGKAVRPQLALRVSDAA 726
           FHPDAEDLFNVTCDLKLVCEKLRDR+QRHKRQDIE+GKAVRPQLA RV++AA
Sbjct: 185 FHPDAEDLFNVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAKRVANAA 236