BLASTX nr result

ID: Cimicifuga21_contig00020489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020489
         (1015 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274837.1| PREDICTED: scarecrow-like protein 6-like [Vi...    97   6e-18
ref|XP_002266783.1| PREDICTED: scarecrow-like protein 22-like [V...    92   3e-16
ref|XP_002304419.1| GRAS family transcription factor [Populus tr...    91   6e-16
ref|XP_002329873.1| GRAS family transcription factor [Populus tr...    89   2e-15
emb|CBI38908.3| unnamed protein product [Vitis vinifera]               85   3e-14

>ref|XP_002274837.1| PREDICTED: scarecrow-like protein 6-like [Vitis vinifera]
          Length = 804

 Score = 97.1 bits (240), Expect = 6e-18
 Identities = 65/173 (37%), Positives = 86/173 (49%), Gaps = 9/173 (5%)
 Frame = +2

Query: 524  PFNLQGEGAFQVSTEISSSGLEKWKK----GVGCLGNEPTXXXXXXXXXXXXXXXXXXXX 691
            P  L+G+G F++     +S LEKW K    G  C+G EPT                    
Sbjct: 61   PLELEGKGVFEICL---NSLLEKWNKEEEEGGCCVGTEPTSVLDTRRSPSPPTSTSTLSS 117

Query: 692  XXXXXXX---GVASVQ--QKWEWPHTQQQQEENSAALVSEQGNSRKEEWGSDLQPIPTTL 856
                      GVA+V      +WP  Q     ++A              G +L PIP ++
Sbjct: 118  SCGGGGSDTAGVAAVSGNPSQKWPPAQPDTTSSNA--------------GVELHPIPASV 163

Query: 857  EGVNGSEKCGLGMEDWETMLSESGASLGQEQSLLGWIMGEVEDPSSGLKQLLQ 1015
            + +   EKCGLGMEDWE++LSE+ AS  QEQS+L WIMG+VEDPS GL +LLQ
Sbjct: 164  D-LGAGEKCGLGMEDWESVLSETAASPSQEQSILRWIMGDVEDPSVGLNKLLQ 215


>ref|XP_002266783.1| PREDICTED: scarecrow-like protein 22-like [Vitis vinifera]
          Length = 814

 Score = 91.7 bits (226), Expect = 3e-16
 Identities = 74/204 (36%), Positives = 90/204 (44%), Gaps = 36/204 (17%)
 Frame = +2

Query: 512  MRGKPFNLQGEGAFQVSTEISSSGLEKWKKG--VGCLGNEP------------------- 628
            MRG PFN QG+G            LEKWK+   +  L NEP                   
Sbjct: 3    MRGIPFNFQGQGV-----------LEKWKEEEVLSFLSNEPTSVLDTRRSPSPPTSTSTS 51

Query: 629  TXXXXXXXXXXXXXXXXXXXXXXXXXXXGVAS-------VQQKWEWPHTQQQQEENSAAL 787
            T                           GVA+         QKW      +    +   +
Sbjct: 52   TLASSFAGGGGSTGSVGVGGGGSADNTPGVAAGPLVSDNCLQKWPVSLPLETNPPDPGGV 111

Query: 788  VSEQGNSRKEEWGSDLQPIPTTL----EGVNGSEKCG---LGMEDWETMLSESGA-SLGQ 943
                G SRK+EW ++LQPI + L     G  G E+CG   LG+EDWE+MLSES A S G 
Sbjct: 112  CG--GGSRKDEWAAELQPITSGLVELVAGGAGEERCGGLGLGLEDWESMLSESAAASPGH 169

Query: 944  EQSLLGWIMGEVEDPSSGLKQLLQ 1015
            EQSLLGWI G+V+DPS GLK LLQ
Sbjct: 170  EQSLLGWISGDVDDPSFGLKHLLQ 193


>ref|XP_002304419.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222841851|gb|EEE79398.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 777

 Score = 90.5 bits (223), Expect = 6e-16
 Identities = 44/77 (57%), Positives = 55/77 (71%)
 Frame = +2

Query: 785  LVSEQGNSRKEEWGSDLQPIPTTLEGVNGSEKCGLGMEDWETMLSESGASLGQEQSLLGW 964
            +V+   N RK+EW ++LQP P+ LE V+  E+CGLG+EDWE MLSE      QEQSLL W
Sbjct: 89   VVNPVNNERKDEWATELQPFPSGLEFVSTGERCGLGLEDWENMLSEP----SQEQSLLRW 144

Query: 965  IMGEVEDPSSGLKQLLQ 1015
            I G+V+D   GLKQLLQ
Sbjct: 145  IAGDVDDTQFGLKQLLQ 161


>ref|XP_002329873.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222871110|gb|EEF08241.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 777

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 43/76 (56%), Positives = 53/76 (69%)
 Frame = +2

Query: 788  VSEQGNSRKEEWGSDLQPIPTTLEGVNGSEKCGLGMEDWETMLSESGASLGQEQSLLGWI 967
            V+   N RK+EW ++LQPIP+ LE V+   +CGLG+EDWE MLSE      QEQS L WI
Sbjct: 94   VNPVSNERKDEWATELQPIPSGLEFVSSGARCGLGLEDWENMLSEP----SQEQSFLRWI 149

Query: 968  MGEVEDPSSGLKQLLQ 1015
             G+V+D   GLKQLLQ
Sbjct: 150  AGDVDDTQFGLKQLLQ 165


>emb|CBI38908.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 40/64 (62%), Positives = 51/64 (79%)
 Frame = +2

Query: 824  GSDLQPIPTTLEGVNGSEKCGLGMEDWETMLSESGASLGQEQSLLGWIMGEVEDPSSGLK 1003
            G +L PIP +++ +   EKCGLGMEDWE++LSE+ AS  QEQS+L WIMG+VEDPS GL 
Sbjct: 68   GVELHPIPASVD-LGAGEKCGLGMEDWESVLSETAASPSQEQSILRWIMGDVEDPSVGLN 126

Query: 1004 QLLQ 1015
            +LLQ
Sbjct: 127  KLLQ 130


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