BLASTX nr result

ID: Cimicifuga21_contig00020486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020486
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60072.1| hypothetical protein VITISV_022946 [Vitis vinifera]    87   3e-15
emb|CBI30694.3| unnamed protein product [Vitis vinifera]               84   5e-14
ref|XP_003532757.1| PREDICTED: uncharacterized protein LOC100787...    77   6e-12
ref|XP_002316822.1| predicted protein [Populus trichocarpa] gi|2...    74   3e-11
ref|XP_002533964.1| conserved hypothetical protein [Ricinus comm...    73   8e-11

>emb|CAN60072.1| hypothetical protein VITISV_022946 [Vitis vinifera]
          Length = 333

 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 69/212 (32%), Positives = 102/212 (48%), Gaps = 2/212 (0%)
 Frame = -1

Query: 640 TSSNCDINSPNDRRNAMMGNQPIRPSRFLEQKRWPPREMIHNQAMKQKNSNNVTWAGDGS 461
           T +    ++PN    A+  N+P RPSRFLE+K+WPPRE+I N   ++  +N        S
Sbjct: 134 TQNRPSTSNPNHVLEAIAQNRPTRPSRFLEEKKWPPRELIGNPWREKTRTN------AAS 187

Query: 460 QNATHINWST--SVSTDVTNTKQQSWCNQHNNVNNTRLQSSSCHPILMSDNVEPEFEPPF 287
           Q+  H   +T   V   +T +K+ S  +  N     + QS   +P  +S    P+ EPPF
Sbjct: 188 QSLVHQICTTPRCVGATLTYSKKPSEWSPANEERLGQFQSHLHYPKTISSISTPQIEPPF 247

Query: 286 RLETLWMRSSQSNQTPVESKVKEKGCLPNLQLSLRQNLGNENEDMASGSTSDINXXXXXX 107
           RLE        SNQ   E ++KE+  LP+LQL L Q   NE ED    S  ++N      
Sbjct: 248 RLE--------SNQ---EKRLKEEEWLPDLQLRLSQRSANE-EDTHHKSKYEMN----TM 291

Query: 106 XXXXXXXXRQEAQSIEQLNDTSRTKTWIPQAS 11
                   RQ+ Q  E+  + ++T  W  Q +
Sbjct: 292 LSLSPYSSRQQEQPTEKQKEETQTNAWPSQTT 323


>emb|CBI30694.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 66/194 (34%), Positives = 94/194 (48%), Gaps = 2/194 (1%)
 Frame = -1

Query: 586 GNQPIRPSRFLEQKRWPPREMIHNQAMKQKNSNNVTWAGDGSQNATHINWST--SVSTDV 413
           GN P RPSRFLE+K+WPPRE+I N   ++  +N        SQ+  H   +T   V   +
Sbjct: 247 GNGPTRPSRFLEEKKWPPRELIGNPWREKTRTN------AASQSLVHQICTTPRCVGATL 300

Query: 412 TNTKQQSWCNQHNNVNNTRLQSSSCHPILMSDNVEPEFEPPFRLETLWMRSSQSNQTPVE 233
           T +K+ S  +  N     + QS   +P  +S    P+ EPPFRLE        SNQ   E
Sbjct: 301 TYSKKPSEWSPANEERLGQFQSHLHYPKTISSISTPQIEPPFRLE--------SNQ---E 349

Query: 232 SKVKEKGCLPNLQLSLRQNLGNENEDMASGSTSDINXXXXXXXXXXXXXXRQEAQSIEQL 53
            ++KE+  LP+LQL L Q   NE ED    S  ++N              RQ+ Q  E+ 
Sbjct: 350 KRLKEEEWLPDLQLRLSQRSANE-EDTHHKSKYEMN----TMLSLSPYSSRQQEQPTEKQ 404

Query: 52  NDTSRTKTWIPQAS 11
            + ++T  W  Q +
Sbjct: 405 KEETQTNAWPSQTT 418


>ref|XP_003532757.1| PREDICTED: uncharacterized protein LOC100787138 [Glycine max]
          Length = 384

 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 8/219 (3%)
 Frame = -1

Query: 793 YEPNRHWRGLQFPLYQEPLETKISLSRHQEWVF-TQGTMMRPISLRGKDLGLTSSNCDIN 617
           Y    ++ GL  P    P ++K   SRHQ+W F +     RP     + +  T+      
Sbjct: 168 YNDRSYFHGLMHPSSLSPSQSKAIDSRHQQWYFNSHQPYRRPSYFSNEVVSSTTLQTQGR 227

Query: 616 SPNDRRNAMMGNQ---PIRPSRFLEQKRWPPREMIHNQAMKQKNSNNVTWAGDGSQNATH 446
           S +  +  +M      P++PS+FLE+K+WPP ++++N   K++   N++ +  GSQ   H
Sbjct: 228 SMSSNQINLMDATSIAPMKPSQFLEEKKWPPLDIMNNHHWKKRLPANIS-SNSGSQPVVH 286

Query: 445 INWSTSVSTDVTNTKQQSWCNQHNNVNNTRLQ----SSSCHPILMSDNVEPEFEPPFRLE 278
              +TS S            ++ N  NNTR+     S+S      S++++ E EP FR+ 
Sbjct: 287 QFGTTSPSLRP---------SELNFGNNTRISWEHLSNSDEHRNYSNSLKLELEPLFRI- 336

Query: 277 TLWMRSSQSNQTPVESKVKEKGCLPNLQLSLRQNLGNEN 161
                  +SNQ   E   KEK   P+L+LSL Q  GN +
Sbjct: 337 -------KSNQ---EKLQKEKQWAPDLRLSLSQRDGNND 365


>ref|XP_002316822.1| predicted protein [Populus trichocarpa] gi|222859887|gb|EEE97434.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 64/219 (29%), Positives = 99/219 (45%), Gaps = 6/219 (2%)
 Frame = -1

Query: 766 LQFPLYQEPLETKISLSRHQEWVFTQGTMMRPISLRGKDLGLTSSNCDINSPNDRRNAMM 587
           L   L+Q P   K  LSR+Q+W      + R  +L  KDLG                  +
Sbjct: 22  LHSSLFQRPPSNKTRLSRYQQWEIGAHGVKRQSNLARKDLG------------QGMETAI 69

Query: 586 GNQPIRPSRFLEQKRWPPREMIHN-QAMKQKNSNNVTWAG--DGSQNATHINWSTSVSTD 416
             +PIRP R LE++RW P EM  N   + + N  +VT      GS    H+N S+    +
Sbjct: 70  DIRPIRPLRLLEERRWHPLEMAKNCWEIIRSNPTSVTCTNSCSGSPPQAHLNCSSPRLFE 129

Query: 415 VTNTKQQSWCNQHNNVNNTRLQSSSCHPILMSDN---VEPEFEPPFRLETLWMRSSQSNQ 245
             + ++ +  N  N+V   +++ S  +  L + N    + +FEPPFRLE        +N 
Sbjct: 130 TNSYRKPTAVNSGNDV---KIKQSLVNSSLSTGNFNCFKSKFEPPFRLEL-------NN- 178

Query: 244 TPVESKVKEKGCLPNLQLSLRQNLGNENEDMASGSTSDI 128
              +  + +K  LP+LQL L Q +G  +      ST +I
Sbjct: 179 ---DKLLNDKEWLPDLQLRLSQRVGINDHGTQCRSTQEI 214


>ref|XP_002533964.1| conserved hypothetical protein [Ricinus communis]
           gi|223526061|gb|EEF28420.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 149

 Score = 72.8 bits (177), Expect = 8e-11
 Identities = 56/158 (35%), Positives = 76/158 (48%), Gaps = 3/158 (1%)
 Frame = -1

Query: 589 MGNQPIRPSRFLEQKRWPPREMIHNQAMKQKNSNNVTWAGDGSQ--NATHINWSTSVSTD 416
           M   P+RPSRFLE+KRWPP EM+ N+    KN  +VTW  + S    A  I    S S +
Sbjct: 1   MATGPLRPSRFLEEKRWPPFEMVKNRWKIAKNYADVTWPNNTSSPPEAHQIGDLLSGSVE 60

Query: 415 VTNTKQQSWCNQHNNVNNTRLQS-SSCHPILMSDNVEPEFEPPFRLETLWMRSSQSNQTP 239
            T  + +     +  VN + L S  S H     +  +  FEPPFRLE             
Sbjct: 61  -TPYRWEREVGNNKMVNQSSLDSRDSSHGF---NCFKAAFEPPFRLE-----------VN 105

Query: 238 VESKVKEKGCLPNLQLSLRQNLGNENEDMASGSTSDIN 125
            +  +KEK  LP+LQL L Q +G +       ST +I+
Sbjct: 106 KDKLLKEKEWLPDLQLRLSQRVGMDENKSHCRSTQEIS 143


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