BLASTX nr result

ID: Cimicifuga21_contig00020479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020479
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60235.1| hypothetical protein VITISV_028850 [Vitis vinifera]    96   4e-18
emb|CBI31778.3| unnamed protein product [Vitis vinifera]               95   7e-18
ref|XP_002284103.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    95   7e-18
ref|XP_004162573.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    94   9e-18
ref|XP_004149532.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    94   9e-18

>emb|CAN60235.1| hypothetical protein VITISV_028850 [Vitis vinifera]
          Length = 666

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 51/119 (42%), Positives = 79/119 (66%)
 Frame = -2

Query: 358 PLALVLSPKREAAVKVKRVFRQAARNIDSVCVDGEIHLGIHVDPKTRGLIETMLTRAFVD 179
           PLALVL+P RE A +V++ F ++A N+D++CV G   +   ++    G          VD
Sbjct: 190 PLALVLAPTRELARQVEKEFXESAPNLDTLCVYGGTPISRQMNSLDYG----------VD 239

Query: 178 VVIGTPGRVIDVVEELQLSLSKVQYVVLDDVDIMVSEGLEKDVEDVLDRFHQKPQMMIF 2
           VV+GTPGR+ID+++   L+LS+VQ+VVLD+ D M++ G E+DVE +L++  Q  Q M+F
Sbjct: 240 VVVGTPGRIIDLIKRGALNLSEVQFVVLDEADQMLAVGFEEDVEMILEKLPQNRQSMMF 298


>emb|CBI31778.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 51/119 (42%), Positives = 79/119 (66%)
 Frame = -2

Query: 358 PLALVLSPKREAAVKVKRVFRQAARNIDSVCVDGEIHLGIHVDPKTRGLIETMLTRAFVD 179
           PLALVL+P RE A +V++ F ++A N+D++CV G   +   ++    G          VD
Sbjct: 190 PLALVLAPTRELARQVEKEFCESAPNLDTLCVYGGTPISRQMNSLDYG----------VD 239

Query: 178 VVIGTPGRVIDVVEELQLSLSKVQYVVLDDVDIMVSEGLEKDVEDVLDRFHQKPQMMIF 2
           VV+GTPGR+ID+++   L+LS+VQ+VVLD+ D M++ G E+DVE +L++  Q  Q M+F
Sbjct: 240 VVVGTPGRIIDLIKRGALNLSEVQFVVLDEADQMLAVGFEEDVEMILEKLPQNRQSMMF 298


>ref|XP_002284103.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Vitis
           vinifera]
          Length = 666

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 51/119 (42%), Positives = 79/119 (66%)
 Frame = -2

Query: 358 PLALVLSPKREAAVKVKRVFRQAARNIDSVCVDGEIHLGIHVDPKTRGLIETMLTRAFVD 179
           PLALVL+P RE A +V++ F ++A N+D++CV G   +   ++    G          VD
Sbjct: 190 PLALVLAPTRELARQVEKEFCESAPNLDTLCVYGGTPISRQMNSLDYG----------VD 239

Query: 178 VVIGTPGRVIDVVEELQLSLSKVQYVVLDDVDIMVSEGLEKDVEDVLDRFHQKPQMMIF 2
           VV+GTPGR+ID+++   L+LS+VQ+VVLD+ D M++ G E+DVE +L++  Q  Q M+F
Sbjct: 240 VVVGTPGRIIDLIKRGALNLSEVQFVVLDEADQMLAVGFEEDVEMILEKLPQNRQSMMF 298


>ref|XP_004162573.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Cucumis
           sativus]
          Length = 611

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 52/119 (43%), Positives = 79/119 (66%)
 Frame = -2

Query: 358 PLALVLSPKREAAVKVKRVFRQAARNIDSVCVDGEIHLGIHVDPKTRGLIETMLTRAFVD 179
           PLALVL+P RE A +V++ F++AA ++D++CV G    G  +  + R L         VD
Sbjct: 182 PLALVLAPTRELARQVEKEFQEAAPSLDTICVYG----GAPISQQMRQLDYG------VD 231

Query: 178 VVIGTPGRVIDVVEELQLSLSKVQYVVLDDVDIMVSEGLEKDVEDVLDRFHQKPQMMIF 2
           + +GTPGR+ID++    L+LS+VQ+VVLD+ D M+  G ++DVE +L+R  QK Q M+F
Sbjct: 232 IAVGTPGRLIDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQSMMF 290


>ref|XP_004149532.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Cucumis
           sativus]
          Length = 593

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 52/119 (43%), Positives = 79/119 (66%)
 Frame = -2

Query: 358 PLALVLSPKREAAVKVKRVFRQAARNIDSVCVDGEIHLGIHVDPKTRGLIETMLTRAFVD 179
           PLALVL+P RE A +V++ F++AA ++D++CV G    G  +  + R L         VD
Sbjct: 182 PLALVLAPTRELARQVEKEFQEAAPSLDTICVYG----GAPISQQMRQLDYG------VD 231

Query: 178 VVIGTPGRVIDVVEELQLSLSKVQYVVLDDVDIMVSEGLEKDVEDVLDRFHQKPQMMIF 2
           + +GTPGR+ID++    L+LS+VQ+VVLD+ D M+  G ++DVE +L+R  QK Q M+F
Sbjct: 232 IAVGTPGRLIDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKRQSMMF 290


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