BLASTX nr result

ID: Cimicifuga21_contig00020476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020476
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326696.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_002329542.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002528800.1| conserved hypothetical protein [Ricinus comm...   105   5e-21
ref|XP_002279644.2| PREDICTED: uncharacterized protein LOC100243...   101   5e-20
ref|XP_003553283.1| PREDICTED: uncharacterized protein LOC100776...    90   2e-16

>ref|XP_002326696.1| predicted protein [Populus trichocarpa] gi|222834018|gb|EEE72495.1|
           predicted protein [Populus trichocarpa]
          Length = 373

 Score =  112 bits (279), Expect = 4e-23
 Identities = 64/151 (42%), Positives = 88/151 (58%), Gaps = 12/151 (7%)
 Frame = -1

Query: 419 RSNPGRVATYKKRIQDILDQGLRKLRKYDFNDDETTDANDLDGPKDIKRLKTKSLRAERA 240
           RSNP R    +KR+Q ++D GL+KL+K + N+    + N+LD   +    K K LRAERA
Sbjct: 222 RSNPRRSENVRKRLQQLVDGGLKKLQKLELNNGSVNNQNELDKRPE----KAKGLRAERA 277

Query: 239 SAIDDLIDKLNKARTEEELQSCVEMKSELFDQHEEANPTSEGSPT------------PVL 96
           SA+ DLIDKLNKAR EE+L SC+E+K++L  QH  +   ++                P  
Sbjct: 278 SALSDLIDKLNKARNEEDLNSCMEIKAQLSSQHTRSRTETKDVEVSKEQIAKNDLAPPQK 337

Query: 95  ESYHIPTKLWITGEIDQETLNGIDLHFSSLD 3
           E  +   KL+ T EID + L  ID HFSSL+
Sbjct: 338 ELDYFSQKLFRTVEIDHQALTSIDAHFSSLE 368


>ref|XP_002329542.1| predicted protein [Populus trichocarpa] gi|222870251|gb|EEF07382.1|
           predicted protein [Populus trichocarpa]
          Length = 365

 Score =  106 bits (264), Expect = 2e-21
 Identities = 62/150 (41%), Positives = 86/150 (57%), Gaps = 11/150 (7%)
 Frame = -1

Query: 419 RSNPGRVATYKKRIQDILDQGLRKLRKYDFNDDETTDANDLDGPKDIKRLKTKSLRAERA 240
           RSN  R    +KR+Q I+D GL+KL+K + N+    +  ++D   +    K KSLRAE+A
Sbjct: 215 RSNLSRSENDRKRLQQIVDVGLKKLQKLELNNGSVNNQKEVDKRPE----KAKSLRAEKA 270

Query: 239 SAIDDLIDKLNKARTEEELQSCVEMKSELFDQHEEA-----------NPTSEGSPTPVLE 93
           SA+ DL+DKLNKAR EE+L+SC E K++L+ QH  +             T++    P  E
Sbjct: 271 SALSDLMDKLNKARNEEDLKSCSETKAQLYSQHARSRTEIKDFEVLREQTAKKDVAPQKE 330

Query: 92  SYHIPTKLWITGEIDQETLNGIDLHFSSLD 3
                 KL+   EID E L  ID HFSSL+
Sbjct: 331 MDFFSQKLFRAVEIDHEALTSIDAHFSSLE 360


>ref|XP_002528800.1| conserved hypothetical protein [Ricinus communis]
           gi|223531803|gb|EEF33622.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 366

 Score =  105 bits (261), Expect = 5e-21
 Identities = 63/141 (44%), Positives = 84/141 (59%), Gaps = 2/141 (1%)
 Frame = -1

Query: 419 RSNPGRVATYKKRIQDILDQGLRKLRKYDFNDDETTDANDLDGPKDIKRLKTKSLRAERA 240
           R NP R    +KRIQ I+D GL+KL+K +F D       D++  K  +  K + L AERA
Sbjct: 223 RLNPTRSENVRKRIQQIVDVGLKKLQKLEFEDGVNDTHTDIEHDK--RPEKKEKLWAERA 280

Query: 239 SAIDDLIDKLNKARTEEELQSCVEMKSELFDQHEEANPTSEGS--PTPVLESYHIPTKLW 66
           SA+ +L +KLNKAR EE+L SC+EMK +L+    +     E S   T   E  ++  KL+
Sbjct: 281 SALSELTEKLNKARNEEDLTSCMEMKMQLYSHQGQTETKDEASHKQTVKKELDYLSQKLF 340

Query: 65  ITGEIDQETLNGIDLHFSSLD 3
            T EIDQE LN I  HFSSL+
Sbjct: 341 RTVEIDQEDLNKIGAHFSSLE 361


>ref|XP_002279644.2| PREDICTED: uncharacterized protein LOC100243688 [Vitis vinifera]
          Length = 384

 Score =  101 bits (252), Expect = 5e-20
 Identities = 65/149 (43%), Positives = 90/149 (60%), Gaps = 12/149 (8%)
 Frame = -1

Query: 419 RSNPGRVATYKKRIQDILDQGLRKLRKYDFNDDETTDANDLDGPKDIKRLKTKSLRAERA 240
           +SNP R    +KRI +I+D+GL+KL   +    +  D N+L  P   KR KT   RA+R 
Sbjct: 237 KSNPTRSDNSRKRILEIVDRGLKKLNYVN----DLNDQNEL--PAGSKRPKTG--RADRL 288

Query: 239 SAIDDLIDKLNKARTEEELQSCVEMKSELFDQHEEAN------------PTSEGSPTPVL 96
           SA+ +LIDKLNKAR EE+L SC+EMKS++F+ + E +             T++    P+ 
Sbjct: 289 SALSELIDKLNKARNEEDLNSCMEMKSQIFNTNTETSQAEIEEVDTYTEQTAKDDLAPMH 348

Query: 95  ESYHIPTKLWITGEIDQETLNGIDLHFSS 9
           ES +   K   T EIDQE+LN ID+HFSS
Sbjct: 349 ESNYTLPKFLGTTEIDQESLNNIDVHFSS 377


>ref|XP_003553283.1| PREDICTED: uncharacterized protein LOC100776348 [Glycine max]
          Length = 295

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 61/152 (40%), Positives = 83/152 (54%), Gaps = 13/152 (8%)
 Frame = -1

Query: 419 RSNPGRVATYKKRIQDILDQGLRKLRKYDFNDDETTDANDLDGPKDIKRLKTKSLRAERA 240
           RSN  R    + RIQ I+D+GL+KL K   + D     +D     +  +   +    ER 
Sbjct: 146 RSNSMRSDGLRMRIQQIVDEGLKKLEKSAVDGDINESIDD-----ESNKASERGKGIERL 200

Query: 239 SAIDDLIDKLNKARTEEELQSCVEMKSELFDQHEEANPTS------EGSPTPVLE----- 93
           SAI DL+DK+NKARTEE+L+ C+EMK++LF+  E AN           + T V++     
Sbjct: 201 SAISDLMDKINKARTEEDLKPCLEMKTQLFNLDEGANVKDLQDNEMHENETVVIDVVPAE 260

Query: 92  --SYHIPTKLWITGEIDQETLNGIDLHFSSLD 3
              Y +P K   T EID ETLN ID HFS+ D
Sbjct: 261 GLDYSLP-KFVTTTEIDLETLNTIDKHFSTQD 291


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