BLASTX nr result

ID: Cimicifuga21_contig00020475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020475
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273656.1| PREDICTED: DNA replication complex GINS prot...   341   1e-91
gb|AAD38294.1|AC007789_20 unknown protein [Oryza sativa Japonica...   333   4e-89
ref|NP_001042585.1| Os01g0248600 [Oryza sativa Japonica Group] g...   332   7e-89
ref|XP_003565172.1| PREDICTED: DNA replication complex GINS prot...   330   2e-88
ref|XP_002463445.1| hypothetical protein SORBIDRAFT_02g043990 [S...   328   7e-88

>ref|XP_002273656.1| PREDICTED: DNA replication complex GINS protein PSF2 [Vitis
           vinifera] gi|297737295|emb|CBI26496.3| unnamed protein
           product [Vitis vinifera]
          Length = 210

 Score =  341 bits (874), Expect = 1e-91
 Identities = 164/201 (81%), Positives = 184/201 (91%)
 Frame = -3

Query: 854 MAGQSDPHLSIFSAEEVEFLAEDEKVEIVPNINMEPLNFICGDFGPFRPQIATEVPLWLA 675
           MAGQSDP++S+FSA+EVEFL EDE VEIVPN+ M+PLN ICGDFGPFRPQIAT+VPLWLA
Sbjct: 1   MAGQSDPYISLFSAQEVEFLGEDEMVEIVPNMRMDPLNLICGDFGPFRPQIATQVPLWLA 60

Query: 674 MALKKRGKCTIRPPQWMSVEKLTGVLEAERDSPKEFQPLPFHYVEISKLLFDHARDDIPE 495
           +ALKKRGKCTIRPP+WMSV+KLT VLEAER+S +EFQPLPFHYVEI++LL DHARDDIP+
Sbjct: 61  VALKKRGKCTIRPPEWMSVDKLTQVLEAERNSLREFQPLPFHYVEIARLLSDHARDDIPD 120

Query: 494 IYMVRSLIEDIRDVRFHKVENGLQTISTRTHGVKLKNLSAMEVNIVRPFFVRALQAFYKH 315
           +YMVRSLIEDIR+VRFHKVE GL+TI  RTH VKLKNLSAME NIVRPF VRALQAFYKH
Sbjct: 121 VYMVRSLIEDIRNVRFHKVETGLETIHERTHAVKLKNLSAMEANIVRPFVVRALQAFYKH 180

Query: 314 DSPQMIHQPDTTANRRQPQAD 252
           DSP+MI QPDTTA RR+  AD
Sbjct: 181 DSPEMIPQPDTTAIRRRQVAD 201


>gb|AAD38294.1|AC007789_20 unknown protein [Oryza sativa Japonica Group]
          Length = 276

 Score =  333 bits (853), Expect = 4e-89
 Identities = 165/225 (73%), Positives = 181/225 (80%)
 Frame = -3

Query: 854 MAGQSDPHLSIFSAEEVEFLAEDEKVEIVPNINMEPLNFICGDFGPFRPQIATEVPLWLA 675
           MAGQSDPHLSIFS  EVEF+AEDE VEIVPNI ME LN ICGDFGPF PQIA++VPLWLA
Sbjct: 1   MAGQSDPHLSIFSPSEVEFVAEDEIVEIVPNIRMEALNMICGDFGPFFPQIASKVPLWLA 60

Query: 674 MALKKRGKCTIRPPQWMSVEKLTGVLEAERDSPKEFQPLPFHYVEISKLLFDHARDDIPE 495
           +ALKKRGKCTIR P WM+V++LT VL+AER+SPKEFQPLPFHY+EISKLLFDHARDDI +
Sbjct: 61  VALKKRGKCTIRTPDWMTVDRLTQVLDAERESPKEFQPLPFHYIEISKLLFDHARDDISD 120

Query: 494 IYMVRSLIEDIRDVRFHKVENGLQTISTRTHGVKLKNLSAMEVNIVRPFFVRALQAFYKH 315
            Y+VRSLIEDIRDVRFHKVE GL+TIS RTH VKLKNLSAMEVNIVRPF VR LQAFYKH
Sbjct: 121 AYLVRSLIEDIRDVRFHKVETGLETISGRTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKH 180

Query: 314 DSPQMIHQPDTTANRRQPQADXXXXXXXXXXXXRQAVDLVQLHHR 180
           DSPQMI Q D T +R  P  D              AV    +H +
Sbjct: 181 DSPQMIQQADNTGSRPTPVTDRGPRRDLRRSCRPAAVTRYHIHEK 225


>ref|NP_001042585.1| Os01g0248600 [Oryza sativa Japonica Group]
           gi|11320850|dbj|BAB18333.1| putative DNA replication
           complex GINS protein PSF2 [Oryza sativa Japonica Group]
           gi|113532116|dbj|BAF04499.1| Os01g0248600 [Oryza sativa
           Japonica Group] gi|215686405|dbj|BAG87690.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215704757|dbj|BAG94785.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 211

 Score =  332 bits (851), Expect = 7e-89
 Identities = 162/201 (80%), Positives = 176/201 (87%)
 Frame = -3

Query: 854 MAGQSDPHLSIFSAEEVEFLAEDEKVEIVPNINMEPLNFICGDFGPFRPQIATEVPLWLA 675
           MAGQSDPHLSIFS  EVEF+AEDE VEIVPNI ME LN ICGDFGPF PQIA++VPLWLA
Sbjct: 1   MAGQSDPHLSIFSPSEVEFVAEDEIVEIVPNIRMEALNMICGDFGPFFPQIASKVPLWLA 60

Query: 674 MALKKRGKCTIRPPQWMSVEKLTGVLEAERDSPKEFQPLPFHYVEISKLLFDHARDDIPE 495
           +ALKKRGKCTIR P WM+V++LT VL+AER+SPKEFQPLPFHY+EISKLLFDHARDDI +
Sbjct: 61  VALKKRGKCTIRTPDWMTVDRLTQVLDAERESPKEFQPLPFHYIEISKLLFDHARDDISD 120

Query: 494 IYMVRSLIEDIRDVRFHKVENGLQTISTRTHGVKLKNLSAMEVNIVRPFFVRALQAFYKH 315
            Y+VRSLIEDIRDVRFHKVE GL+TIS RTH VKLKNLSAMEVNIVRPF VR LQAFYKH
Sbjct: 121 AYLVRSLIEDIRDVRFHKVETGLETISGRTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKH 180

Query: 314 DSPQMIHQPDTTANRRQPQAD 252
           DSPQMI Q D T +R  P  D
Sbjct: 181 DSPQMIQQADNTGSRPTPVTD 201


>ref|XP_003565172.1| PREDICTED: DNA replication complex GINS protein PSF2-like
           [Brachypodium distachyon]
          Length = 212

 Score =  330 bits (847), Expect = 2e-88
 Identities = 159/196 (81%), Positives = 176/196 (89%)
 Frame = -3

Query: 854 MAGQSDPHLSIFSAEEVEFLAEDEKVEIVPNINMEPLNFICGDFGPFRPQIATEVPLWLA 675
           MAGQSDPHLS+FS  EVEF+AEDE VEIVPNI ME LN ICGDFGPF PQIA++VPLWLA
Sbjct: 1   MAGQSDPHLSLFSPSEVEFVAEDEIVEIVPNIRMEALNMICGDFGPFFPQIASKVPLWLA 60

Query: 674 MALKKRGKCTIRPPQWMSVEKLTGVLEAERDSPKEFQPLPFHYVEISKLLFDHARDDIPE 495
           +ALK+RGKCTIRPP+WM+VE+LT VL+AER+SP+EFQPLPFHY+EISKLLFDHARDDI +
Sbjct: 61  VALKRRGKCTIRPPEWMTVERLTQVLDAERESPREFQPLPFHYIEISKLLFDHARDDISD 120

Query: 494 IYMVRSLIEDIRDVRFHKVENGLQTISTRTHGVKLKNLSAMEVNIVRPFFVRALQAFYKH 315
            Y+VRSLIEDIRDVRFHKVE GL+TIS RTH VKLKNLSAMEVNIVRPF VR LQAFYKH
Sbjct: 121 AYLVRSLIEDIRDVRFHKVETGLETISGRTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKH 180

Query: 314 DSPQMIHQPDTTANRR 267
           DSPQMI Q D T + R
Sbjct: 181 DSPQMIQQADNTGSSR 196


>ref|XP_002463445.1| hypothetical protein SORBIDRAFT_02g043990 [Sorghum bicolor]
           gi|241926822|gb|EER99966.1| hypothetical protein
           SORBIDRAFT_02g043990 [Sorghum bicolor]
          Length = 211

 Score =  328 bits (842), Expect = 7e-88
 Identities = 160/201 (79%), Positives = 174/201 (86%)
 Frame = -3

Query: 854 MAGQSDPHLSIFSAEEVEFLAEDEKVEIVPNINMEPLNFICGDFGPFRPQIATEVPLWLA 675
           MAGQSDPHLSIFS  EVEF+AEDE VEIVPNI M+ LN ICGDFGPF PQI T+VPLWLA
Sbjct: 1   MAGQSDPHLSIFSPSEVEFVAEDEIVEIVPNIRMDALNMICGDFGPFFPQIPTKVPLWLA 60

Query: 674 MALKKRGKCTIRPPQWMSVEKLTGVLEAERDSPKEFQPLPFHYVEISKLLFDHARDDIPE 495
           +ALKKR KCTIR P WM+V++LT VLEAER+SP+EFQPLPFHY+EISKLLFDHARDDI +
Sbjct: 61  VALKKRSKCTIRTPDWMTVDRLTQVLEAERESPREFQPLPFHYIEISKLLFDHARDDISD 120

Query: 494 IYMVRSLIEDIRDVRFHKVENGLQTISTRTHGVKLKNLSAMEVNIVRPFFVRALQAFYKH 315
            Y+VRSLIEDIRDVRFHKVE GL+TIS RTH VKLKNLSAMEVNIVRPF VR LQAFYKH
Sbjct: 121 AYLVRSLIEDIRDVRFHKVETGLETISGRTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKH 180

Query: 314 DSPQMIHQPDTTANRRQPQAD 252
           DSPQMI Q D T +R  P  D
Sbjct: 181 DSPQMIQQADNTGSRATPVTD 201


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