BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020472
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]   165   3e-39
ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containi...   164   7e-39
ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumi...   151   6e-35
ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containi...   146   1e-33
ref|XP_002311462.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25

>emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  165 bits (418), Expect = 3e-39
 Identities = 79/128 (61%), Positives = 99/128 (77%)
 Frame = +3

Query: 3   FDEMPERNLVSWNSIIVGFSRNKLFDGAVEAFREVLKENSVTPDQVSFSSALSACANSGS 182
           FD+MPERNLVSWNS+IVGF  N L+D AV  F++VL+E +V P++VS SS LSACAN G 
Sbjct: 303 FDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGG 362

Query: 183 LYTGKQVHGLSVKHGFLTLAYVMNSLMDMYNKCGCFEDAVNLFRTLEDKDVVTWNVMSMG 362
           L  G+QVHG+ VK+G + L YVMNSLMDMY KC  F++ V LF+ + D+DVVTWNV+ MG
Sbjct: 363 LNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMG 422

Query: 363 WVYNSCFE 386
           +V N  FE
Sbjct: 423 FVQNDKFE 430



 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 40/126 (31%), Positives = 73/126 (57%)
 Frame = +3

Query: 3   FDEMPERNLVSWNSIIVGFSRNKLFDGAVEAFREVLKENSVTPDQVSFSSALSACANSGS 182
           F  + +R++V+WN +++GF +N  F+ A   F  V++   + PD+ SFS+ L + A+  +
Sbjct: 405 FQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFW-VMRREGILPDEASFSTVLHSSASLAA 463

Query: 183 LYTGKQVHGLSVKHGFLTLAYVMNSLMDMYNKCGCFEDAVNLFRTLEDKDVVTWNVMSMG 362
           L+ G  +H   +K G++    ++ SL+ MY KCG   DA  +F  +ED +V++W  M   
Sbjct: 464 LHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISA 523

Query: 363 WVYNSC 380
           +  + C
Sbjct: 524 YQLHGC 529



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 40/122 (32%), Positives = 72/122 (59%)
 Frame = +3

Query: 21  RNLVSWNSIIVGFSRNKLFDGAVEAFREVLKENSVTPDQVSFSSALSACANSGSLYTGKQ 200
           + +V+W S+I   S   +   A+  F + ++ +   P+Q +FSS LSA A +  +  G+Q
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQ-MRCSGPYPNQFTFSSILSASAATMMVLHGQQ 266

Query: 201 VHGLSVKHGFLTLAYVMNSLMDMYNKCGCFEDAVNLFRTLEDKDVVTWNVMSMGWVYNSC 380
           +H L  KHGF    +V  +L+DMY KC     AV +F  + ++++V+WN M +G+ +N+ 
Sbjct: 267 LHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNL 326

Query: 381 FE 386
           ++
Sbjct: 327 YD 328


>ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 585

 Score =  164 bits (415), Expect = 7e-39
 Identities = 79/128 (61%), Positives = 98/128 (76%)
 Frame = +3

Query: 3   FDEMPERNLVSWNSIIVGFSRNKLFDGAVEAFREVLKENSVTPDQVSFSSALSACANSGS 182
           FD+MPERNLVSWNS+IVGF  N L+D AV  F++VL+E +V P++VS SS LSACAN G 
Sbjct: 68  FDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGG 127

Query: 183 LYTGKQVHGLSVKHGFLTLAYVMNSLMDMYNKCGCFEDAVNLFRTLEDKDVVTWNVMSMG 362
           L  G+QVHG+ VK G + L YVMNSLMDMY KC  F++ V LF+ + D+DVVTWNV+ MG
Sbjct: 128 LNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMG 187

Query: 363 WVYNSCFE 386
           +V N  FE
Sbjct: 188 FVQNDKFE 195



 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 40/126 (31%), Positives = 73/126 (57%)
 Frame = +3

Query: 3   FDEMPERNLVSWNSIIVGFSRNKLFDGAVEAFREVLKENSVTPDQVSFSSALSACANSGS 182
           F  + +R++V+WN +++GF +N  F+ A   F  V++   + PD+ SFS+ L + A+  +
Sbjct: 170 FQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFW-VMRREGILPDEASFSTVLHSSASLAA 228

Query: 183 LYTGKQVHGLSVKHGFLTLAYVMNSLMDMYNKCGCFEDAVNLFRTLEDKDVVTWNVMSMG 362
           L+ G  +H   +K G++    ++ SL+ MY KCG   DA  +F  +ED +V++W  M   
Sbjct: 229 LHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISA 288

Query: 363 WVYNSC 380
           +  + C
Sbjct: 289 YQLHGC 294



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/86 (38%), Positives = 55/86 (63%)
 Frame = +3

Query: 129 PDQVSFSSALSACANSGSLYTGKQVHGLSVKHGFLTLAYVMNSLMDMYNKCGCFEDAVNL 308
           P+Q +FSS LSA A +  +  G+Q+H L  KHGF    +V  +L+DMY KC     AV +
Sbjct: 8   PNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRV 67

Query: 309 FRTLEDKDVVTWNVMSMGWVYNSCFE 386
           F  + ++++V+WN M +G+ +N+ ++
Sbjct: 68  FDQMPERNLVSWNSMIVGFFHNNLYD 93


>ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
          Length = 1866

 Score =  151 bits (381), Expect = 6e-35
 Identities = 72/128 (56%), Positives = 91/128 (71%)
 Frame = +3

Query: 3   FDEMPERNLVSWNSIIVGFSRNKLFDGAVEAFREVLKENSVTPDQVSFSSALSACANSGS 182
           F+EMP RNLVSWN++IVGF +NKL+D A+  F+ +L EN    D+VSFSS  SACAN+G+
Sbjct: 188 FEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGN 247

Query: 183 LYTGKQVHGLSVKHGFLTLAYVMNSLMDMYNKCGCFEDAVNLFRTLEDKDVVTWNVMSMG 362
           L  GKQVHG+++K G   L Y+ NSL DMY KCG F D   LF     +DVVTWN+M M 
Sbjct: 248 LEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMA 307

Query: 363 WVYNSCFE 386
           +VYN  +E
Sbjct: 308 YVYNHNYE 315



 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 41/117 (35%), Positives = 68/117 (58%)
 Frame = +3

Query: 3   FDEMPERNLVSWNSIIVGFSRNKLFDGAVEAFREVLKENSVTPDQVSFSSALSACANSGS 182
           F     R++V+WN +I+ +  N  ++ A  +F  + ++ S+ PD+ S+SS L +CAN  +
Sbjct: 290 FSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSI-PDEASYSSVLHSCANLAA 348

Query: 183 LYTGKQVHGLSVKHGFLTLAYVMNSLMDMYNKCGCFEDAVNLFRTLEDKDVVTWNVM 353
           LY G  +H   ++ GF+    V +SL+ MY KCG   DA  +F   ED++VV W  +
Sbjct: 349 LYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAI 405



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/130 (33%), Positives = 77/130 (59%), Gaps = 2/130 (1%)
 Frame = +3

Query: 3   FDEMPE--RNLVSWNSIIVGFSRNKLFDGAVEAFREVLKENSVTPDQVSFSSALSACANS 176
           F   P+  +N+VSW S+I   +R K    A+  F   ++ + V P+  +FS+ LSAC ++
Sbjct: 85  FSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNH-MRRSGVYPNHYTFSAVLSACTDT 143

Query: 177 GSLYTGKQVHGLSVKHGFLTLAYVMNSLMDMYNKCGCFEDAVNLFRTLEDKDVVTWNVMS 356
            +   G+Q+H L  KHGFL   +V+++L+DMY KC     A  +F  +  +++V+WN M 
Sbjct: 144 TASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMI 203

Query: 357 MGWVYNSCFE 386
           +G++ N  ++
Sbjct: 204 VGFLQNKLYD 213


>ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  146 bits (369), Expect = 1e-33
 Identities = 78/120 (65%), Positives = 86/120 (71%)
 Frame = +3

Query: 3   FDEMPERNLVSWNSIIVGFSRNKLFDGAVEAFREVLKENSVTPDQVSFSSALSACANSGS 182
           FDEMP RNLVSWNS+IVGF +NKL+  A+  FREVL   S+ PDQVS SS LSACA    
Sbjct: 258 FDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVL---SLGPDQVSISSVLSACAGLVE 314

Query: 183 LYTGKQVHGLSVKHGFLTLAYVMNSLMDMYNKCGCFEDAVNLFRTLEDKDVVTWNVMSMG 362
           L  GKQVHG  VK G + L YV NSL+DMY KCG FEDA  LF    D+DVVTWNVM MG
Sbjct: 315 LDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMG 374



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 45/124 (36%), Positives = 71/124 (57%), Gaps = 1/124 (0%)
 Frame = +3

Query: 15  PERNLVSWNSIIVGFSR-NKLFDGAVEAFREVLKENSVTPDQVSFSSALSACANSGSLYT 191
           P  N+V+W ++I   SR NK F      F   ++   + P+  +FS+ L ACA++  L  
Sbjct: 161 PSTNVVTWTTLINQLSRSNKPFQALT--FFNRMRTTGIYPNHFTFSAILPACAHAALLSE 218

Query: 192 GKQVHGLSVKHGFLTLAYVMNSLMDMYNKCGCFEDAVNLFRTLEDKDVVTWNVMSMGWVY 371
           G+Q+H L  KH FL   +V  +L+DMY KCG    A N+F  +  +++V+WN M +G+V 
Sbjct: 219 GQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVK 278

Query: 372 NSCF 383
           N  +
Sbjct: 279 NKLY 282



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/121 (33%), Positives = 69/121 (57%)
 Frame = +3

Query: 18  ERNLVSWNSIIVGFSRNKLFDGAVEAFREVLKENSVTPDQVSFSSALSACANSGSLYTGK 197
           +R++V+WN +I+G  R + F+ A   F+ +++E  V PD+ S+SS   A A+  +L  G 
Sbjct: 362 DRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREG-VEPDEASYSSLFHASASIAALTQGT 420

Query: 198 QVHGLSVKHGFLTLAYVMNSLMDMYNKCGCFEDAVNLFRTLEDKDVVTWNVMSMGWVYNS 377
            +H   +K G +  + + +SL+ MY KCG   DA  +FR  ++ +VV W  M   +  + 
Sbjct: 421 MIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHG 480

Query: 378 C 380
           C
Sbjct: 481 C 481


>ref|XP_002311462.1| predicted protein [Populus trichocarpa] gi|222851282|gb|EEE88829.1|
           predicted protein [Populus trichocarpa]
          Length = 538

 Score =  118 bits (295), Expect = 6e-25
 Identities = 52/120 (43%), Positives = 82/120 (68%)
 Frame = +3

Query: 3   FDEMPERNLVSWNSIIVGFSRNKLFDGAVEAFREVLKENSVTPDQVSFSSALSACANSGS 182
           F+EMPERN+ SWN++I G++RN  F   + AF+ +L + +V P+  +  + LSACA  G+
Sbjct: 202 FEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPNDATLVNVLSACARLGA 261

Query: 183 LYTGKQVHGLSVKHGFLTLAYVMNSLMDMYNKCGCFEDAVNLFRTLEDKDVVTWNVMSMG 362
           L  GK VH  +  HG+    YV N+LMDMY KCG  E A+++F+++++KD+++WN +  G
Sbjct: 262 LDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSMDNKDLISWNTIIGG 321



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/122 (30%), Positives = 65/122 (53%)
 Frame = +3

Query: 3   FDEMPERNLVSWNSIIVGFSRNKLFDGAVEAFREVLKENSVTPDQVSFSSALSACANSGS 182
           FD++PE N   WN++  G+S+N+     +  FR+ +K   V P+  +F   L +C    +
Sbjct: 8   FDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQ-MKGLDVMPNCFTFPVILKSCVKINA 66

Query: 183 LYTGKQVHGLSVKHGFLTLAYVMNSLMDMYNKCGCFEDAVNLFRTLEDKDVVTWNVMSMG 362
           L  G++VH   +K GF    +V  +L+DMY   G    A  +F  + +++V+ W  M  G
Sbjct: 67  LKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTAMING 126

Query: 363 WV 368
           ++
Sbjct: 127 YI 128