BLASTX nr result

ID: Cimicifuga21_contig00020466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020466
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266664.2| PREDICTED: LOW QUALITY PROTEIN: GATA transcr...   112   3e-23
emb|CBI17512.3| unnamed protein product [Vitis vinifera]              112   3e-23
emb|CAN72981.1| hypothetical protein VITISV_009032 [Vitis vinifera]   112   3e-23
ref|XP_002310237.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002521591.1| GATA transcription factor, putative [Ricinus...   104   8e-21

>ref|XP_002266664.2| PREDICTED: LOW QUALITY PROTEIN: GATA transcription factor 18-like
           [Vitis vinifera]
          Length = 294

 Score =  112 bits (280), Expect = 3e-23
 Identities = 57/102 (55%), Positives = 67/102 (65%), Gaps = 12/102 (11%)
 Frame = +3

Query: 60  GDSLLARRCANCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERRVXXXXXXXXXXXXXXX 239
           GD LLARRCANCDTTSTPLWRNGP+GPKSLCNACGIRFKKEERR                
Sbjct: 167 GDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA---TAAAATTGATAG 223

Query: 240 VIEPQHLM-SHNHHAWAQHGPHR-----------EFRFVEGE 329
           V+EPQH+M SH++++W  H   +           EFRF+E +
Sbjct: 224 VMEPQHIMISHHNNSWVHHSQTQKMPCLSPAMGNEFRFIEDD 265


>emb|CBI17512.3| unnamed protein product [Vitis vinifera]
          Length = 285

 Score =  112 bits (280), Expect = 3e-23
 Identities = 57/102 (55%), Positives = 67/102 (65%), Gaps = 12/102 (11%)
 Frame = +3

Query: 60  GDSLLARRCANCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERRVXXXXXXXXXXXXXXX 239
           GD LLARRCANCDTTSTPLWRNGP+GPKSLCNACGIRFKKEERR                
Sbjct: 105 GDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA---TAAAATTGATAG 161

Query: 240 VIEPQHLM-SHNHHAWAQHGPHR-----------EFRFVEGE 329
           V+EPQH+M SH++++W  H   +           EFRF+E +
Sbjct: 162 VMEPQHIMISHHNNSWVHHSQTQKMPCLSPAMGNEFRFIEDD 203


>emb|CAN72981.1| hypothetical protein VITISV_009032 [Vitis vinifera]
          Length = 324

 Score =  112 bits (280), Expect = 3e-23
 Identities = 57/102 (55%), Positives = 67/102 (65%), Gaps = 12/102 (11%)
 Frame = +3

Query: 60  GDSLLARRCANCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERRVXXXXXXXXXXXXXXX 239
           GD LLARRCANCDTTSTPLWRNGP+GPKSLCNACGIRFKKEERR                
Sbjct: 197 GDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA---TAAAATTGATAG 253

Query: 240 VIEPQHLM-SHNHHAWAQHGPHR-----------EFRFVEGE 329
           V+EPQH+M SH++++W  H   +           EFRF+E +
Sbjct: 254 VMEPQHIMISHHNNSWVHHSQTQKMPCLSPAMGNEFRFIEDD 295


>ref|XP_002310237.1| predicted protein [Populus trichocarpa] gi|222853140|gb|EEE90687.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  107 bits (267), Expect = 1e-21
 Identities = 54/98 (55%), Positives = 60/98 (61%), Gaps = 6/98 (6%)
 Frame = +3

Query: 48  NILNGDSLLARRCANCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERRVXXXXXXXXXXX 227
           N+ N D LLARRCANCDTTSTPLWRNGP+GPKSLCNACGIRFKKEERR            
Sbjct: 125 NLANNDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAASANNASAS 184

Query: 228 XXXXVIEPQHLMSHNHHAWAQ------HGPHREFRFVE 323
                   QH   H +++W Q        P  EFRF+E
Sbjct: 185 GAM----EQHYGYHQNNSWVQTQKMPCFSPANEFRFIE 218


>ref|XP_002521591.1| GATA transcription factor, putative [Ricinus communis]
           gi|223539269|gb|EEF40862.1| GATA transcription factor,
           putative [Ricinus communis]
          Length = 332

 Score =  104 bits (259), Expect = 8e-21
 Identities = 53/98 (54%), Positives = 60/98 (61%), Gaps = 6/98 (6%)
 Frame = +3

Query: 48  NILNGDSLLARRCANCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERRVXXXXXXXXXXX 227
           N  N D LLARRCANCDTTSTPLWRNGP+GPKSLCNACGIRFKKEERR            
Sbjct: 205 NSANNDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAANNASSNAG 264

Query: 228 XXXXVIEPQHLMSHNHHAWAQ------HGPHREFRFVE 323
                   QH  ++ +++W Q        P  EFRF+E
Sbjct: 265 STSSGTMEQH-YAYQNNSWVQTQKMQCFSPANEFRFIE 301


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