BLASTX nr result

ID: Cimicifuga21_contig00020446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020446
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298360.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|XP_002313438.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002533586.1| conserved hypothetical protein [Ricinus comm...    67   2e-09
emb|CAN68753.1| hypothetical protein VITISV_035530 [Vitis vinifera]    59   4e-08
ref|XP_002527720.1| conserved hypothetical protein [Ricinus comm...    56   3e-06

>ref|XP_002298360.1| predicted protein [Populus trichocarpa] gi|222845618|gb|EEE83165.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score = 79.0 bits (193), Expect = 5e-13
 Identities = 52/154 (33%), Positives = 77/154 (50%), Gaps = 6/154 (3%)
 Frame = +1

Query: 103 MYSKFDQFSLVGMSNSDIFFIEKDSKTIKFDF----RLEFSDENQNVVAFKEEEDGVKIE 270
           M+S+   FSL G+ NS IFF EKD    +F+F     LE  D+ + V     +E  V+ E
Sbjct: 1   MFSESKPFSLTGLPNSQIFFSEKDPNPKEFNFLVRPTLELGDDGETVPQELHQEKEVEEE 60

Query: 271 EKCSTKDDASFLVKEVKIPSNAELEVDENE--DGFRTPTSLEHKIPVMQQCXXXXXXXXX 444
            K   K + S    ++K PS    ++++++  DG +TPTS + KIPV+ QC         
Sbjct: 61  GKQEDKCEISVPTLKIKFPSLGAFQIEDSDHGDGSKTPTSSDCKIPVIFQC--PPAPIKP 118

Query: 445 XXXXXXXXXXXXXHIRIDLSKEMEMLFPPALVVD 546
                         + +DLS E+E LFPPAL  +
Sbjct: 119 KSLPSTKRKSPRRRVLLDLSNEVETLFPPALAAN 152


>ref|XP_002313438.1| predicted protein [Populus trichocarpa] gi|222849846|gb|EEE87393.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 9/147 (6%)
 Frame = +1

Query: 133 VGMSNSDIFFIEKDSKTIKFDF----RLEFSDENQNVVA-FKEEEDGVKIEEKCSTKDDA 297
           +G SNS++FF EKD   ++F+F     LE  D+ + V     +E++ ++ EEK   + + 
Sbjct: 1   MGFSNSEMFFSEKDLNPMEFNFLVRSALELGDDCEIVPQDLHQEKEVLEKEEKQEDECEI 60

Query: 298 SFLVKEVKIPSNAELEV----DENEDGFRTPTSLEHKIPVMQQCXXXXXXXXXXXXXXXX 465
           S    ++K+PS    ++    D+++DGF+TPTSL+ KIPV+ QC                
Sbjct: 61  SVPTLKIKLPSVEAFQIEDDKDDDDDGFKTPTSLDRKIPVIFQC--PPAPRKPKSLPSAK 118

Query: 466 XXXXXXHIRIDLSKEMEMLFPPALVVD 546
                  + +DLS E+E LFPPAL  D
Sbjct: 119 RKSPQRRVLLDLSNEIESLFPPALAGD 145


>ref|XP_002533586.1| conserved hypothetical protein [Ricinus communis]
           gi|223526530|gb|EEF28791.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 176

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 19/157 (12%)
 Frame = +1

Query: 133 VGMSNSDIFFIEKDSKTIKFDF----RLEFSDE--------NQNVVAFKEEEDGVKIEEK 276
           +G+SNS++   EKD  +++F+F     L+F DE        + +     EE++  +++E 
Sbjct: 1   MGVSNSEMLLSEKDLSSMEFNFLVRPALKFEDECDIAPLQISSDPDDLPEEDEEEEVQEH 60

Query: 277 CSTKDDASFLVKEVKIPSNAELEVDENE-------DGFRTPTSLEHKIPVMQQCXXXXXX 435
              K        ++K+PS  E ++ E E       DG +TPTSL HKIP +  C      
Sbjct: 61  QEDKCKLLISTLKIKLPSLGEFKIQEQEQEQQDLDDGCKTPTSLNHKIPTLLPC-PPAPR 119

Query: 436 XXXXXXXXXXXXXXXXHIRIDLSKEMEMLFPPALVVD 546
                            + +DLS E+E LFPPAL  D
Sbjct: 120 KPKSLPSNKRKSPARRRVLLDLSNEIESLFPPALRAD 156


>emb|CAN68753.1| hypothetical protein VITISV_035530 [Vitis vinifera]
          Length = 212

 Score = 59.3 bits (142), Expect(2) = 4e-08
 Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
 Frame = +1

Query: 163 IEKDSKTIKFDF----RLEFSDENQNVV----------AFKEEEDGVKIEEKCSTKDDAS 300
           +EKD  +I F+F     LEF D++               F ++++  + EE+   K    
Sbjct: 60  LEKDLTSIGFNFLAKPTLEFQDDDHECGNCETARSGEGKFDKKQEEKEREEQEEEKCKVK 119

Query: 301 FLVKEVKIPSNAELEVDENED--GFRTPTSLEHKIPVMQQCXXXXXXXXXXXXXXXXXXX 474
               ++K+ S AE +V+E++D  GF+TPTS++HKIP++  C                   
Sbjct: 120 VTPMDLKMSSLAEFKVEEDDDNDGFKTPTSVDHKIPLILPCPPAPKKPKSLPSTKRRAAG 179

Query: 475 XXXHIRIDLSKEMEMLFPP 531
               + +DLS E++ LFPP
Sbjct: 180 PNRRVLLDLSNEIQSLFPP 198



 Score = 23.1 bits (48), Expect(2) = 4e-08
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 113 NLISFPWWVCRILISFSLKRTL 178
           N   FP WVC IL   SL++ L
Sbjct: 43  NSNQFPSWVCPILGCSSLEKDL 64


>ref|XP_002527720.1| conserved hypothetical protein [Ricinus communis]
           gi|223532861|gb|EEF34633.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 176

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 43/164 (26%), Positives = 81/164 (49%), Gaps = 28/164 (17%)
 Frame = +1

Query: 139 MSNSDIFFIEKDSKTIKFDFR----LEFSD---------ENQNVVAFKEEEDGV------ 261
           MS+SD+F +++ ++ ++F+F      +F D         ++Q+    +E E         
Sbjct: 1   MSHSDLFLVKEYNEEMEFNFSQRPGFQFQDGVISHQCHHQDQDKQQEQEREQEAAKVEIT 60

Query: 262 -KIEEKC-----STKDDASFLVKEVKIPSNAELEVDENEDGFRTPTSLEHKIPVMQQC-- 417
            K++E+C     S +  +   + E+K  +N + + +E+ DGF+TPTSL+HKIPV +QC  
Sbjct: 61  EKVKEECKRTASSAESTSPVTLGELKA-TNDDDDDEEDNDGFKTPTSLDHKIPVTKQCPP 119

Query: 418 -XXXXXXXXXXXXXXXXXXXXXXHIRIDLSKEMEMLFPPALVVD 546
                                  ++++DL +E+E LFP  ++ D
Sbjct: 120 APGKPKIPPSAKRKARHTNVRRRNLQLDLCQELESLFPRTILDD 163


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