BLASTX nr result
ID: Cimicifuga21_contig00020411
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00020411
(1741 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK95128.1| unknown [Populus trichocarpa] 649 0.0
ref|XP_002301073.1| predicted protein [Populus trichocarpa] gi|2... 646 0.0
ref|XP_004136430.1| PREDICTED: serine--tRNA ligase-like [Cucumis... 656 0.0
ref|XP_004160298.1| PREDICTED: serine--tRNA ligase-like [Cucumis... 655 0.0
ref|XP_002513960.1| seryl-tRNA synthetase, putative [Ricinus com... 654 0.0
>gb|ABK95128.1| unknown [Populus trichocarpa]
Length = 523
Score = 649 bits (1673), Expect(2) = 0.0
Identities = 321/395 (81%), Positives = 348/395 (88%)
Frame = -2
Query: 1392 QEVERLRGERNVVANKMKGKLESSERQRLIEEGKNLKELLATLEEDLIQLTDRLQQEAQC 1213
+EVERLR ERN VANKMKGKLE SERQ+LIEEGKNLKE LATLEEDL++LTD LQ EAQC
Sbjct: 128 KEVERLRAERNAVANKMKGKLEISERQKLIEEGKNLKEGLATLEEDLVKLTDELQLEAQC 187
Query: 1212 IPNMTHPDVPIGGEECSALRKMVGSPRDFSFPVKDHLQLGKELDLFDFDSASEVSGSKFY 1033
IPN+THP VPIGGE+ S +RKM G+PRDF FPVKDHLQLGKELDLFDFD+A+EVSGSKFY
Sbjct: 188 IPNLTHPLVPIGGEDSSTVRKMAGTPRDFGFPVKDHLQLGKELDLFDFDAAAEVSGSKFY 247
Query: 1032 YLKNEAVMLEMGLTNWAISEVMKKGFTPLITPEIVRSSIVEKCGFQPRGTNTQVYSIEGS 853
YLKNEAVMLEM L NW +SEVMKKGFTPL TPE+VRSS+VEKCGFQPRG NTQVYSIEGS
Sbjct: 248 YLKNEAVMLEMALVNWTLSEVMKKGFTPLTTPELVRSSVVEKCGFQPRGDNTQVYSIEGS 307
Query: 852 DQCLIGTAEIPVGGIHMDSILPDSVLPLKYVAYSHCFXXXXXXXXXXXXGLYRVHQFSKV 673
DQCLIGTAEIPVGGIHMD+IL ++ LPLKYVAYSHCF GLYRVHQF+KV
Sbjct: 308 DQCLIGTAEIPVGGIHMDTILAETQLPLKYVAYSHCFRTEAGAAGTATRGLYRVHQFTKV 367
Query: 672 EMFILCRPEDSATYHEELIGIEEDLFSSLGLHFKTLDMASIDLGAPAYRKYDVEAWMPGL 493
EMF+LCRPE+S +YHEELI IEEDLFS+LGLH+KTLDMAS DLGAPAYRK+DVEAWMPGL
Sbjct: 368 EMFVLCRPEESDSYHEELIKIEEDLFSALGLHYKTLDMASGDLGAPAYRKFDVEAWMPGL 427
Query: 492 GRYGEISSASNCTDYQSRRLGIRYRPSPSEVSPNPKKGKANFGPTQFVHTLNATACAVPR 313
GRYGEISSASNC DYQSRRLGIRYRPS +P PKKGK + PTQFVHTLNATACAVPR
Sbjct: 428 GRYGEISSASNCIDYQSRRLGIRYRPSEPTPAP-PKKGKGSLAPTQFVHTLNATACAVPR 486
Query: 312 MIVCLLENFQQEDGSVTIPEPLRPFMGGLACISPK 208
MIVCLLEN+QQEDGSV IP PLR FMGGL I+PK
Sbjct: 487 MIVCLLENYQQEDGSVIIPGPLRAFMGGLELITPK 521
Score = 85.1 bits (209), Expect(2) = 0.0
Identities = 56/114 (49%), Positives = 69/114 (60%), Gaps = 15/114 (13%)
Frame = -1
Query: 1741 MALSHTLTGTTLQTLKFAAIPTVFRS-----PKTLILQSLT-HSI-----RRPSSLGFIV 1595
M L GTT+QTLK AAIP R KTL+L + H+ R P L +V
Sbjct: 1 MGLQCYFGGTTIQTLKLAAIPASSRFILKPISKTLVLNPFSRHNYVICPQRNPFKL--LV 58
Query: 1594 RALSVSS----PLLQTPEEKVSKPQWKASIDFKWIRDNKDAVFNNIKNRNSTVD 1445
RALS ++ P+ ++ + KV KPQWKA+IDFKWIRDNKDAV NIKNRNS +
Sbjct: 59 RALSSTAVQTAPITESLDNKVVKPQWKAAIDFKWIRDNKDAVALNIKNRNSNAN 112
>ref|XP_002301073.1| predicted protein [Populus trichocarpa] gi|222842799|gb|EEE80346.1|
predicted protein [Populus trichocarpa]
Length = 523
Score = 646 bits (1667), Expect(2) = 0.0
Identities = 319/395 (80%), Positives = 348/395 (88%)
Frame = -2
Query: 1392 QEVERLRGERNVVANKMKGKLESSERQRLIEEGKNLKELLATLEEDLIQLTDRLQQEAQC 1213
+EVERLR ERN VANKMKGK+E SERQ+LIEEGKNLKE LATLEEDL++LTD LQ EAQC
Sbjct: 128 KEVERLRAERNAVANKMKGKVEISERQKLIEEGKNLKEGLATLEEDLVKLTDELQLEAQC 187
Query: 1212 IPNMTHPDVPIGGEECSALRKMVGSPRDFSFPVKDHLQLGKELDLFDFDSASEVSGSKFY 1033
IPN+THP VPIGGE+ S +RKM G+PRDF FPV+DHLQLGKELDLFDFD+A+EVSGSKFY
Sbjct: 188 IPNLTHPLVPIGGEDSSTVRKMAGTPRDFGFPVRDHLQLGKELDLFDFDAAAEVSGSKFY 247
Query: 1032 YLKNEAVMLEMGLTNWAISEVMKKGFTPLITPEIVRSSIVEKCGFQPRGTNTQVYSIEGS 853
YLKNEAVMLEM L NW +SEVMKKGFTPL TPE+VRSS+VEKCGFQPRG NTQVYSIEGS
Sbjct: 248 YLKNEAVMLEMALVNWTLSEVMKKGFTPLTTPELVRSSVVEKCGFQPRGDNTQVYSIEGS 307
Query: 852 DQCLIGTAEIPVGGIHMDSILPDSVLPLKYVAYSHCFXXXXXXXXXXXXGLYRVHQFSKV 673
DQCLIGTAEIPVGGIHMD+IL ++ LPLKYVAYSHCF GLYRVHQF+KV
Sbjct: 308 DQCLIGTAEIPVGGIHMDAILAETQLPLKYVAYSHCFRTEAGAAGTATRGLYRVHQFTKV 367
Query: 672 EMFILCRPEDSATYHEELIGIEEDLFSSLGLHFKTLDMASIDLGAPAYRKYDVEAWMPGL 493
EMF+LCRPE+S +YHEELI IEEDLFS+LGLH+KTLDMAS DLGAPAYRK+DVEAWMPGL
Sbjct: 368 EMFVLCRPEESDSYHEELIKIEEDLFSALGLHYKTLDMASGDLGAPAYRKFDVEAWMPGL 427
Query: 492 GRYGEISSASNCTDYQSRRLGIRYRPSPSEVSPNPKKGKANFGPTQFVHTLNATACAVPR 313
GRYGEISSASNC DYQSRRLGIRYRPS +P PKKGK + PTQFVHTLNATACAVPR
Sbjct: 428 GRYGEISSASNCIDYQSRRLGIRYRPSEPTPAP-PKKGKGSLAPTQFVHTLNATACAVPR 486
Query: 312 MIVCLLENFQQEDGSVTIPEPLRPFMGGLACISPK 208
MIVCLLEN+QQEDGSV IP PLR FMGGL I+PK
Sbjct: 487 MIVCLLENYQQEDGSVIIPGPLRAFMGGLELITPK 521
Score = 85.9 bits (211), Expect(2) = 0.0
Identities = 56/114 (49%), Positives = 69/114 (60%), Gaps = 15/114 (13%)
Frame = -1
Query: 1741 MALSHTLTGTTLQTLKFAAIPTVFRS-----PKTLILQSLT-HSI-----RRPSSLGFIV 1595
M L GTT+QTLK AAIP R KTL+L + H+ R P L +V
Sbjct: 1 MGLQCYFGGTTIQTLKLAAIPASSRFILKPISKTLVLNPFSRHNYVICPQRNPFKL--LV 58
Query: 1594 RALSVSS----PLLQTPEEKVSKPQWKASIDFKWIRDNKDAVFNNIKNRNSTVD 1445
RALS ++ P+ ++ + KV KPQWKA+IDFKWIRDNKDAV NIKNRNS +
Sbjct: 59 RALSATAVQTAPITESLDNKVVKPQWKAAIDFKWIRDNKDAVALNIKNRNSNAN 112
>ref|XP_004136430.1| PREDICTED: serine--tRNA ligase-like [Cucumis sativus]
Length = 539
Score = 656 bits (1693), Expect(2) = 0.0
Identities = 323/394 (81%), Positives = 352/394 (89%)
Frame = -2
Query: 1392 QEVERLRGERNVVANKMKGKLESSERQRLIEEGKNLKELLATLEEDLIQLTDRLQQEAQC 1213
+EVE+LR ERN+VANKMKGKLE SERQ+LIEEGKNLKE L +LEE+L++LTD+LQQEAQC
Sbjct: 144 KEVEQLRAERNMVANKMKGKLEPSERQKLIEEGKNLKEGLVSLEENLLKLTDQLQQEAQC 203
Query: 1212 IPNMTHPDVPIGGEECSALRKMVGSPRDFSFPVKDHLQLGKELDLFDFDSASEVSGSKFY 1033
IPN THPDVPIGGE+CS +RKMVGSPR+FSFPVKDHL+LGK+LD+FDFD+A+EVSGSKFY
Sbjct: 204 IPNTTHPDVPIGGEDCSIIRKMVGSPREFSFPVKDHLELGKQLDIFDFDAAAEVSGSKFY 263
Query: 1032 YLKNEAVMLEMGLTNWAISEVMKKGFTPLITPEIVRSSIVEKCGFQPRGTNTQVYSIEGS 853
YLKN AV LE+GL NW +SEVMK+GFTPLITPEIVRS++VEKCGFQPRG NTQVYSIEGS
Sbjct: 264 YLKNAAVTLELGLINWTLSEVMKRGFTPLITPEIVRSTVVEKCGFQPRGENTQVYSIEGS 323
Query: 852 DQCLIGTAEIPVGGIHMDSILPDSVLPLKYVAYSHCFXXXXXXXXXXXXGLYRVHQFSKV 673
DQCLIGTAEIPVGGIHMDSIL +S LPLKYVAYSHCF GLYRVHQFSKV
Sbjct: 324 DQCLIGTAEIPVGGIHMDSILSESSLPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKV 383
Query: 672 EMFILCRPEDSATYHEELIGIEEDLFSSLGLHFKTLDMASIDLGAPAYRKYDVEAWMPGL 493
EMFI CRPE+S +YHEELI IEEDLFSSLGLHFKTLDMAS DLGAPAYRK+DVEAWMPGL
Sbjct: 384 EMFIFCRPEESESYHEELIRIEEDLFSSLGLHFKTLDMASADLGAPAYRKFDVEAWMPGL 443
Query: 492 GRYGEISSASNCTDYQSRRLGIRYRPSPSEVSPNPKKGKANFGPTQFVHTLNATACAVPR 313
GRYGEISSASNCTDYQSRRLGIRYRP +V KKGK N PTQFVHTLNATACAVPR
Sbjct: 444 GRYGEISSASNCTDYQSRRLGIRYRPQ-EQVPSTLKKGKGNLAPTQFVHTLNATACAVPR 502
Query: 312 MIVCLLENFQQEDGSVTIPEPLRPFMGGLACISP 211
M+VCLLEN+QQEDGSV IPEPLRPFMGGL ISP
Sbjct: 503 MMVCLLENYQQEDGSVIIPEPLRPFMGGLDRISP 536
Score = 72.0 bits (175), Expect(2) = 0.0
Identities = 53/111 (47%), Positives = 59/111 (53%), Gaps = 18/111 (16%)
Frame = -1
Query: 1732 SHTLTGTT---LQTLKFAAIPT-------VFRSPKTLILQSLTHSIR--RPSSLGFIVRA 1589
SHT + QTLK A P V KT L SL +R RP S +VRA
Sbjct: 16 SHTFPKASTMGFQTLKLPAFPASSTSRLMVLPPTKTPSLTSLHPCVRTHRPPSR-LLVRA 74
Query: 1588 LSVSSPLLQTP------EEKVSKPQWKASIDFKWIRDNKDAVFNNIKNRNS 1454
S+ S P EEKV KPQWKASIDFKWIRDNKD V +NI+NR S
Sbjct: 75 FSLPSVEFDHPPSTIAGEEKVVKPQWKASIDFKWIRDNKDLVASNIQNRKS 125
>ref|XP_004160298.1| PREDICTED: serine--tRNA ligase-like [Cucumis sativus]
Length = 563
Score = 655 bits (1689), Expect(2) = 0.0
Identities = 322/394 (81%), Positives = 351/394 (89%)
Frame = -2
Query: 1392 QEVERLRGERNVVANKMKGKLESSERQRLIEEGKNLKELLATLEEDLIQLTDRLQQEAQC 1213
+EVE+LR ERN+VANKMKGKLE SERQ+LIEEGKNLKE L +LEE+L++LTD+LQQEAQC
Sbjct: 168 KEVEQLRAERNMVANKMKGKLEPSERQKLIEEGKNLKEGLVSLEENLLKLTDQLQQEAQC 227
Query: 1212 IPNMTHPDVPIGGEECSALRKMVGSPRDFSFPVKDHLQLGKELDLFDFDSASEVSGSKFY 1033
IPN THPDVPIGGE+CS +RKMVGSPR+FSFPVKDHL+LGK+LD+FDFD+ +EVSGSKFY
Sbjct: 228 IPNTTHPDVPIGGEDCSIIRKMVGSPREFSFPVKDHLELGKQLDIFDFDAVAEVSGSKFY 287
Query: 1032 YLKNEAVMLEMGLTNWAISEVMKKGFTPLITPEIVRSSIVEKCGFQPRGTNTQVYSIEGS 853
YLKN AV LE+GL NW +SEVMK+GFTPLITPEIVRS++VEKCGFQPRG NTQVYSIEGS
Sbjct: 288 YLKNAAVTLELGLINWTLSEVMKRGFTPLITPEIVRSTVVEKCGFQPRGENTQVYSIEGS 347
Query: 852 DQCLIGTAEIPVGGIHMDSILPDSVLPLKYVAYSHCFXXXXXXXXXXXXGLYRVHQFSKV 673
DQCLIGTAEIPVGGIHMDSIL +S LPLKYVAYSHCF GLYRVHQFSKV
Sbjct: 348 DQCLIGTAEIPVGGIHMDSILSESSLPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKV 407
Query: 672 EMFILCRPEDSATYHEELIGIEEDLFSSLGLHFKTLDMASIDLGAPAYRKYDVEAWMPGL 493
EMFI CRPE+S +YHEELI IEEDLFSSLGLHFKTLDMAS DLGAPAYRK+DVEAWMPGL
Sbjct: 408 EMFIFCRPEESESYHEELIRIEEDLFSSLGLHFKTLDMASADLGAPAYRKFDVEAWMPGL 467
Query: 492 GRYGEISSASNCTDYQSRRLGIRYRPSPSEVSPNPKKGKANFGPTQFVHTLNATACAVPR 313
GRYGEISSASNCTDYQSRRLGIRYRP +V KKGK N PTQFVHTLNATACAVPR
Sbjct: 468 GRYGEISSASNCTDYQSRRLGIRYRPQ-EQVPSTLKKGKGNLAPTQFVHTLNATACAVPR 526
Query: 312 MIVCLLENFQQEDGSVTIPEPLRPFMGGLACISP 211
M+VCLLEN+QQEDGSV IPEPLRPFMGGL ISP
Sbjct: 527 MMVCLLENYQQEDGSVIIPEPLRPFMGGLDRISP 560
Score = 68.6 bits (166), Expect(2) = 0.0
Identities = 40/78 (51%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Frame = -1
Query: 1669 RSPKTLILQSLTHSIRRPSSLGFIVRALSVSSPLLQTP------EEKVSKPQWKASIDFK 1508
++P L + R PS L +VRA S+ S P EEKV KPQWKASIDFK
Sbjct: 74 KTPSLTSLHPCVRTHRPPSRL--LVRAFSLPSVEFDHPPSTIAGEEKVVKPQWKASIDFK 131
Query: 1507 WIRDNKDAVFNNIKNRNS 1454
WIRDNKD V +NI+NR S
Sbjct: 132 WIRDNKDLVASNIQNRKS 149
>ref|XP_002513960.1| seryl-tRNA synthetase, putative [Ricinus communis]
gi|223547046|gb|EEF48543.1| seryl-tRNA synthetase,
putative [Ricinus communis]
Length = 517
Score = 654 bits (1688), Expect(2) = 0.0
Identities = 321/395 (81%), Positives = 353/395 (89%)
Frame = -2
Query: 1392 QEVERLRGERNVVANKMKGKLESSERQRLIEEGKNLKELLATLEEDLIQLTDRLQQEAQC 1213
+EVERLRGERN VANKMKGKLE SER +LI+EGKNLKE L TLEED+++LTD LQQEAQC
Sbjct: 122 KEVERLRGERNAVANKMKGKLEPSERSKLIDEGKNLKEGLMTLEEDMLKLTDELQQEAQC 181
Query: 1212 IPNMTHPDVPIGGEECSALRKMVGSPRDFSFPVKDHLQLGKELDLFDFDSASEVSGSKFY 1033
IPNMTHP VPIG E+CS +RKMVGSPR+FSFPVKDHLQLGKELDLFDFD+A+EVSGSKFY
Sbjct: 182 IPNMTHPAVPIGVEDCSTVRKMVGSPREFSFPVKDHLQLGKELDLFDFDAAAEVSGSKFY 241
Query: 1032 YLKNEAVMLEMGLTNWAISEVMKKGFTPLITPEIVRSSIVEKCGFQPRGTNTQVYSIEGS 853
YLKNEAVMLEM L NW +SEVMK+GFTPL TPE+VR+S+VEKCGFQPRG NTQVYSIEGS
Sbjct: 242 YLKNEAVMLEMALVNWTLSEVMKRGFTPLTTPELVRASVVEKCGFQPRGDNTQVYSIEGS 301
Query: 852 DQCLIGTAEIPVGGIHMDSILPDSVLPLKYVAYSHCFXXXXXXXXXXXXGLYRVHQFSKV 673
DQCLIGTAEIPVGGIHM+SIL S+LPLKYVA+SHCF GLYRVHQFSKV
Sbjct: 302 DQCLIGTAEIPVGGIHMESILTASMLPLKYVAFSHCFRTEAGAAGTATRGLYRVHQFSKV 361
Query: 672 EMFILCRPEDSATYHEELIGIEEDLFSSLGLHFKTLDMASIDLGAPAYRKYDVEAWMPGL 493
EMFILC E+S ++HEELI IEEDLFSSLGLHFKT+DMAS DLGAPAYRK+DVEAWMPGL
Sbjct: 362 EMFILCPAEESESHHEELIKIEEDLFSSLGLHFKTIDMASADLGAPAYRKFDVEAWMPGL 421
Query: 492 GRYGEISSASNCTDYQSRRLGIRYRPSPSEVSPNPKKGKANFGPTQFVHTLNATACAVPR 313
GRYGEISSASNCTDYQSRRLGIRYRPS + NPKKGK++ GPT+FVHTLNATACAVPR
Sbjct: 422 GRYGEISSASNCTDYQSRRLGIRYRPSDPTLR-NPKKGKSSLGPTKFVHTLNATACAVPR 480
Query: 312 MIVCLLENFQQEDGSVTIPEPLRPFMGGLACISPK 208
M++CLLEN+QQEDGSV IPEPLRPFMGGL I+PK
Sbjct: 481 MLICLLENYQQEDGSVIIPEPLRPFMGGLELIAPK 515
Score = 63.9 bits (154), Expect(2) = 0.0
Identities = 35/57 (61%), Positives = 40/57 (70%), Gaps = 5/57 (8%)
Frame = -1
Query: 1600 IVRALS----VSSPLL-QTPEEKVSKPQWKASIDFKWIRDNKDAVFNNIKNRNSTVD 1445
I RALS V PL ++ + KV KPQWKASIDFKWIRDNK+ V NIKNRNS +
Sbjct: 50 ITRALSATAAVQEPLTTESVDSKVVKPQWKASIDFKWIRDNKEEVALNIKNRNSNAN 106