BLASTX nr result

ID: Cimicifuga21_contig00020404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020404
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267812.1| PREDICTED: uncharacterized protein LOC100248...   135   3e-30
ref|XP_003609258.1| hypothetical protein MTR_4g113740 [Medicago ...   107   1e-21
ref|XP_002519041.1| conserved hypothetical protein [Ricinus comm...   105   5e-21

>ref|XP_002267812.1| PREDICTED: uncharacterized protein LOC100248155 [Vitis vinifera]
          Length = 780

 Score =  135 bits (341), Expect = 3e-30
 Identities = 76/135 (56%), Positives = 96/135 (71%), Gaps = 2/135 (1%)
 Frame = -2

Query: 402 DQFQHFLVSVGIDDRKHVFMFILGFVSALAISRVRVSSILVFPASVLVFAVGFSLGFVRC 223
           +QF++FLVSVGIDDRK++F+F+LG V ALAISRVRVSSILVFPASV VFAVGFS G VR 
Sbjct: 86  NQFRNFLVSVGIDDRKYLFVFLLGLVCALAISRVRVSSILVFPASVFVFAVGFSFGLVR- 144

Query: 222 GGVGFSMKDITIIGNKKASKEENLRFSVEKLINLVELFSELGVKVSDLEKEMRG--DSEL 49
              G S  ++++  NK+ SK+EN R S+EKL NLV+ F    VKV++L  ++R   D   
Sbjct: 145 ---GGSASEVSLSSNKRNSKDENFRLSIEKLRNLVDFFDGFDVKVNNLRHDIRRAIDCNQ 201

Query: 48  DRVPEFEKYCNVIRS 4
             V + E Y  VI S
Sbjct: 202 ITVSDLESYVKVIES 216


>ref|XP_003609258.1| hypothetical protein MTR_4g113740 [Medicago truncatula]
           gi|355510313|gb|AES91455.1| hypothetical protein
           MTR_4g113740 [Medicago truncatula]
          Length = 734

 Score =  107 bits (266), Expect = 1e-21
 Identities = 58/114 (50%), Positives = 81/114 (71%), Gaps = 1/114 (0%)
 Frame = -2

Query: 405 FDQFQHFLVSVGIDDRKHVFMFILGFVSALAISRVRVSSILVFPASVLVFAVGFSLGFVR 226
           FD  ++FLVSVGIDDRK+ F+F LG V A+AISRVRVS++L+ PAS +VFA+G+S+GF+R
Sbjct: 73  FDSLRNFLVSVGIDDRKNAFVFFLGIVCAMAISRVRVSTVLILPASAMVFALGYSVGFLR 132

Query: 225 CGGVGFSMKDITIIG-NKKASKEENLRFSVEKLINLVELFSELGVKVSDLEKEM 67
            G   F    ++  G +K+  K+ENL  S EKL +L E   E+ V VSD + ++
Sbjct: 133 NGNFSFGELKLSGSGSSKRKEKDENLN-SSEKLKSLSEFLDEIDVVVSDFKIDL 185


>ref|XP_002519041.1| conserved hypothetical protein [Ricinus communis]
           gi|223541704|gb|EEF43252.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 754

 Score =  105 bits (261), Expect = 5e-21
 Identities = 63/135 (46%), Positives = 90/135 (66%), Gaps = 3/135 (2%)
 Frame = -2

Query: 399 QFQHFLVSVGIDD-RKHVFMFILGFVSALAISRVRVSSILVFPASVLVFAVGFSLGFVRC 223
           Q  +FLVS GIDD +K++F+F LG   A AISRVRVSSI+VFPASVL+FA+GFSLGF R 
Sbjct: 87  QVPYFLVSRGIDDSKKYIFVFFLGIFCAFAISRVRVSSIIVFPASVLIFAIGFSLGFFR- 145

Query: 222 GGVGFSMKDITIIGNKKASKEENLRFSVEKLINLVELFSELGVKVSDLEKEMRG--DSEL 49
              G ++ +++   +KK +K+E  R   E+L +LV  F    VKV+DL+  ++   D++ 
Sbjct: 146 ---GGNLIELSANASKKRAKDEIFRVCSERLRSLVGFFDGFDVKVNDLKNYIQRVIDTKE 202

Query: 48  DRVPEFEKYCNVIRS 4
             + + E Y +VI S
Sbjct: 203 IELGDLENYISVIES 217


Top