BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020400
         (1579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containi...   627   e-177
ref|XP_002525211.1| pentatricopeptide repeat-containing protein,...   593   e-167
ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   577   e-162
ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containi...   572   e-160
ref|XP_002881503.1| pentatricopeptide repeat-containing protein ...   547   e-153

>ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37310-like
            [Vitis vinifera]
          Length = 667

 Score =  627 bits (1616), Expect = e-177
 Identities = 306/439 (69%), Positives = 367/439 (83%)
 Frame = +2

Query: 2    GYAQGGFYEECLDLYRDMVASTGIKPNGVTMVSVLQACAHSNDLLFGIQVHRFIIENSIE 181
            GY+QGGFYE+C +LYR M+ STG++PNGVT+VSVLQACA +NDL+FG++VH+FIIE  +E
Sbjct: 214  GYSQGGFYEDCKELYRKMLDSTGLRPNGVTVVSVLQACAQTNDLVFGMKVHQFIIERKVE 273

Query: 182  VDVAVCNTIIGLYAKCGSLDYARELFDEMKERDGVSYGSMISGYMIHGFVDKAVELFSEM 361
            +DV+  N++IGLYAKCGSLDYARELF+EM  +D V+YGS++SGYM HGFVDKA++LF EM
Sbjct: 274  MDVSAHNSLIGLYAKCGSLDYARELFNEMSNKDEVTYGSIVSGYMTHGFVDKAMDLFREM 333

Query: 362  KIPALSTWNAVLSGLIQNNHHESIPQLFREMQATGLRPNSVTLSSVLPTFSYYSNLKGGK 541
            K P LSTWNAV+SGL+QNN +E I +L +EMQ  G RPN+VTLSS+LPTFS +SNLKGGK
Sbjct: 334  KNPRLSTWNAVISGLVQNNCNEGILELVQEMQEFGFRPNAVTLSSILPTFSCFSNLKGGK 393

Query: 542  QIHCYAIRNNYDRNIYVATAMIDLYAKAGFLHGAHLVFTKCRAKSVVIWTAIISSCAAHG 721
             IH YAIRN Y  NIYVAT++ID YAK GFL GA  VF + + +S+++WTAIIS+ +AHG
Sbjct: 394  AIHAYAIRNGYAHNIYVATSIIDAYAKLGFLRGAQWVFDQSKDRSLIVWTAIISAYSAHG 453

Query: 722  KAGAALTLFSEMLTCGVKPDPVTFTAVLAACAHAGVVDEASRILETMFPVYGIHPSMEHY 901
             A AAL LF +ML+ G +PDPVTFTAVLAACAH+G+V+EA +I + MF  YG  P +EHY
Sbjct: 454  DANAALRLFGDMLSNGTQPDPVTFTAVLAACAHSGMVNEAWKIFDEMFLKYGFQPCVEHY 513

Query: 902  ACMVGVHSRAGKLYEAAKFISKMPIEPSAKVWGALLNGVSVSGDVELGKFVCDRLFEIEP 1081
            ACMVGV SRAG L EAA+FI KMPIEP+AKVWGALLNGVSVSGDVELGKFVCD LF +EP
Sbjct: 514  ACMVGVLSRAGMLSEAAEFICKMPIEPNAKVWGALLNGVSVSGDVELGKFVCDHLFNMEP 573

Query: 1082 ENSWNYIVMANLYSRAGRWEEAEKIREKMKNTGLKKIPGCSWIETSGGLLSFIAGDVSNA 1261
            EN+ NY++MANLYS+AGRWEEAE IREKMK  GLKKIPG SWIETSGGL SFIA DVS+ 
Sbjct: 574  ENTGNYVIMANLYSQAGRWEEAENIREKMKKIGLKKIPGTSWIETSGGLRSFIARDVSSE 633

Query: 1262 MMEEISFVLEVLAEMMREE 1318
              EEI  +LE L  +MREE
Sbjct: 634  RSEEIYGMLEGLLGLMREE 652



 Score =  112 bits (279), Expect = 4e-22
 Identities = 82/299 (27%), Positives = 137/299 (45%), Gaps = 3/299 (1%)
 Frame = +2

Query: 2   GYAQGGFYEECLDLYRDMVASTGI--KPNGVTMVSVLQACAHS-NDLLFGIQVHRFIIEN 172
           GY+    +   L+L   ++ S  +  KP+  T+  VL+A +    D +   +V  F++ +
Sbjct: 109 GYSIHNMHVHTLNLLSSLLPSYSLTLKPDNFTITCVLKALSVLFPDSILAKEVQCFVLRH 168

Query: 173 SIEVDVAVCNTIIGLYAKCGSLDYARELFDEMKERDGVSYGSMISGYMIHGFVDKAVELF 352
             + D+ V N +I  Y++C     AR LFD M +RD VS+ SMI+GY   GF +   EL+
Sbjct: 169 GFDSDIFVVNALITYYSRCDEYGIARILFDRMHDRDIVSWNSMIAGYSQGGFYEDCKELY 228

Query: 353 SEMKIPALSTWNAVLSGLIQNNHHESIPQLFREMQATGLRPNSVTLSSVLPTFSYYSNLK 532
            +M                              + +TGLRPN VT+ SVL   +  ++L 
Sbjct: 229 RKM------------------------------LDSTGLRPNGVTVVSVLQACAQTNDLV 258

Query: 533 GGKQIHCYAIRNNYDRNIYVATAMIDLYAKAGFLHGAHLVFTKCRAKSVVIWTAIISSCA 712
            G ++H + I    + ++    ++I LYAK G L  A  +F +   K  V + +I+S   
Sbjct: 259 FGMKVHQFIIERKVEMDVSAHNSLIGLYAKCGSLDYARELFNEMSNKDEVTYGSIVSGYM 318

Query: 713 AHGKAGAALTLFSEMLTCGVKPDPVTFTAVLAACAHAGVVDEASRILETMFPVYGIHPS 889
            HG    A+ LF EM      P   T+ AV++        +    +++ M   +G  P+
Sbjct: 319 THGFVDKAMDLFREM----KNPRLSTWNAVISGLVQNNCNEGILELVQEM-QEFGFRPN 372


>ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223535508|gb|EEF37177.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 654

 Score =  593 bits (1528), Expect = e-167
 Identities = 282/439 (64%), Positives = 355/439 (80%)
 Frame = +2

Query: 2    GYAQGGFYEECLDLYRDMVASTGIKPNGVTMVSVLQACAHSNDLLFGIQVHRFIIENSIE 181
            GY+QGG YE+C  LYR+MV  +G +PNGVT+VSVLQAC  + DL FG++VH+FI++N +E
Sbjct: 201  GYSQGGLYEDCKTLYREMVDFSGFRPNGVTVVSVLQACGQTQDLAFGMEVHKFIVDNQVE 260

Query: 182  VDVAVCNTIIGLYAKCGSLDYARELFDEMKERDGVSYGSMISGYMIHGFVDKAVELFSEM 361
            +D++VCN +IGLYAKCGSLDYARELFDEM E+D V+YG++ISG M+HG+VD+++ELF  M
Sbjct: 261  IDISVCNALIGLYAKCGSLDYARELFDEMSEKDEVTYGAIISGLMLHGYVDQSLELFRGM 320

Query: 362  KIPALSTWNAVLSGLIQNNHHESIPQLFREMQATGLRPNSVTLSSVLPTFSYYSNLKGGK 541
            K   LSTWNAV++GL+QNN HE +  L REMQA G RPN+VTLSSVL T +Y+S+LKGGK
Sbjct: 321  KTQILSTWNAVITGLVQNNRHEGVLDLVREMQALGFRPNAVTLSSVLSTIAYFSSLKGGK 380

Query: 542  QIHCYAIRNNYDRNIYVATAMIDLYAKAGFLHGAHLVFTKCRAKSVVIWTAIISSCAAHG 721
            +IH YAI+  Y RNIYVATA+ID+YAK+G+L GA  VF + + +S+VIWTAIIS+ A HG
Sbjct: 381  EIHSYAIKIGYHRNIYVATAIIDMYAKSGYLRGAQRVFDQSKDRSLVIWTAIISAYAVHG 440

Query: 722  KAGAALTLFSEMLTCGVKPDPVTFTAVLAACAHAGVVDEASRILETMFPVYGIHPSMEHY 901
             A  AL LF EML  G++PDPVTFTAVLAACAH G+VD+A  I E+MF  YGI P +EHY
Sbjct: 441  DANLALGLFHEMLKQGIQPDPVTFTAVLAACAHCGMVDKAWEIFESMFKKYGIQPLVEHY 500

Query: 902  ACMVGVHSRAGKLYEAAKFISKMPIEPSAKVWGALLNGVSVSGDVELGKFVCDRLFEIEP 1081
            AC+VG   +A +L EA +F+SKMPIEPSAKVWGALL+G S+S DVELGK VCD LFEIEP
Sbjct: 501  ACVVGALGKARRLSEAKEFVSKMPIEPSAKVWGALLHGASISSDVELGKSVCDYLFEIEP 560

Query: 1082 ENSWNYIVMANLYSRAGRWEEAEKIREKMKNTGLKKIPGCSWIETSGGLLSFIAGDVSNA 1261
            EN+ NY++MANLYS+AGRW+EA+++RE+M   GL+KIPG SWIETS GL SFIA D    
Sbjct: 561  ENTGNYVIMANLYSQAGRWKEADEVRERMNKVGLQKIPGSSWIETSEGLRSFIATDTCTE 620

Query: 1262 MMEEISFVLEVLAEMMREE 1318
             +EEI  +L+ L  +MR+E
Sbjct: 621  NVEEIHVILKGLLGLMRDE 639



 Score =  129 bits (325), Expect = 2e-27
 Identities = 108/430 (25%), Positives = 186/430 (43%), Gaps = 34/430 (7%)
 Frame = +2

Query: 5    YAQGGFYEECLDLYRDMVASTGIKPNGVTMVSVLQACAHSNDLLFGIQVHRFIIENSIEV 184
            Y+    + + LDL+  + +S  +    +T +    +    +D+  G +VH F++    + 
Sbjct: 100  YSLHNRHGDALDLFSSLASSNLVNNISITCLLKSLSSFTLSDVKLGKEVHGFVLRTGFDA 159

Query: 185  DVAVCNTIIGLYAKCGSLDYARELFDEMKERDGVSYGSMISGYMIHGFVDKAVELFSEMK 364
            DV V N +I  Y+KC  LD +R++FD M +RD VS+ SMISGY   G  +    L+ EM 
Sbjct: 160  DVFVENALITYYSKCYDLDLSRKVFDRMTKRDVVSWNSMISGYSQGGLYEDCKTLYREM- 218

Query: 365  IPALSTWNAVLSGLIQNNHHESIPQLFREMQATGLRPNSVTLSSVLPTFSYYSNLKGGKQ 544
                                         +  +G RPN VT+ SVL       +L  G +
Sbjct: 219  -----------------------------VDFSGFRPNGVTVVSVLQACGQTQDLAFGME 249

Query: 545  IHCYAIRNNYDRNIYVATAMIDLYAKAGFLHGAHLVFTKCRAKSVVIWTAIISSCAAHGK 724
            +H + + N  + +I V  A+I LYAK G L  A  +F +   K  V + AIIS    HG 
Sbjct: 250  VHKFIVDNQVEIDISVCNALIGLYAKCGSLDYARELFDEMSEKDEVTYGAIISGLMLHGY 309

Query: 725  AGAALTLF-------------------------------SEMLTCGVKPDPVTFTAVLAA 811
               +L LF                                EM   G +P+ VT ++VL+ 
Sbjct: 310  VDQSLELFRGMKTQILSTWNAVITGLVQNNRHEGVLDLVREMQALGFRPNAVTLSSVLST 369

Query: 812  CAHAGVVDEASRILETMFPVYGIHPSMEHYACMVGVHSRAGKLYEAAKFISKMPIEPSAK 991
             A+   +     I      + G H ++     ++ +++++G L  A +   +   + S  
Sbjct: 370  IAYFSSLKGGKEIHSYAIKI-GYHRNIYVATAIIDMYAKSGYLRGAQRVFDQSK-DRSLV 427

Query: 992  VWGALLNGVSVSGDVELGKFVCDRLFE--IEPENSWNYIVMANLYSRAGRWEEAEKIREK 1165
            +W A+++  +V GD  L   +   + +  I+P+      V+A   +  G  ++A +I E 
Sbjct: 428  IWTAIISAYAVHGDANLALGLFHEMLKQGIQPDPVTFTAVLA-ACAHCGMVDKAWEIFES 486

Query: 1166 M-KNTGLKKI 1192
            M K  G++ +
Sbjct: 487  MFKKYGIQPL 496



 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 74/303 (24%), Positives = 149/303 (49%), Gaps = 5/303 (1%)
 Frame = +2

Query: 146  QVHRFIIENSIEVDVAVCNTIIGLYAKCGSLDYARELFDEMKERDGVSYGSMISGYMIHG 325
            Q+H  +I  S+  +  + + ++ LY+K   L +AR +FD++  ++  SY +M+  Y +H 
Sbjct: 45   QLHARLILFSVTPENYLASKLVALYSKTNHLAFARYVFDQIPHKNTFSYNAMLISYSLHN 104

Query: 326  FVDKAVELFSEMKIPALSTWNAVLSGLIQNNHHESIPQLFREMQATGLRPNSVTLSSVLP 505
                A++LFS     +L++ N V                           N+++++ +L 
Sbjct: 105  RHGDALDLFS-----SLASSNLV---------------------------NNISITCLLK 132

Query: 506  TFSYY--SNLKGGKQIHCYAIRNNYDRNIYVATAMIDLYAKAGFLHGAHLVFTKCRAKSV 679
            + S +  S++K GK++H + +R  +D +++V  A+I  Y+K   L  +  VF +   + V
Sbjct: 133  SLSSFTLSDVKLGKEVHGFVLRTGFDADVFVENALITYYSKCYDLDLSRKVFDRMTKRDV 192

Query: 680  VIWTAIISSCAAHGKAGAALTLFSEMLT-CGVKPDPVTFTAVLAACAHAGVVDEASRILE 856
            V W ++IS  +  G      TL+ EM+   G +P+ VT  +VL AC   G   + +  +E
Sbjct: 193  VSWNSMISGYSQGGLYEDCKTLYREMVDFSGFRPNGVTVVSVLQAC---GQTQDLAFGME 249

Query: 857  TMFPVYGIHPSMEHYAC--MVGVHSRAGKLYEAAKFISKMPIEPSAKVWGALLNGVSVSG 1030
                +      ++   C  ++G++++ G L  A +   +M  E     +GA+++G+ + G
Sbjct: 250  VHKFIVDNQVEIDISVCNALIGLYAKCGSLDYARELFDEMS-EKDEVTYGAIISGLMLHG 308

Query: 1031 DVE 1039
             V+
Sbjct: 309  YVD 311


>ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At2g37310-like [Cucumis sativus]
          Length = 635

 Score =  577 bits (1488), Expect = e-162
 Identities = 278/439 (63%), Positives = 353/439 (80%)
 Frame = +2

Query: 2    GYAQGGFYEECLDLYRDMVASTGIKPNGVTMVSVLQACAHSNDLLFGIQVHRFIIENSIE 181
            GY+QGG YEEC +L+R M++S  +KPN +T VSVLQACA SNDL FGI+VHRF+ E+ I+
Sbjct: 183  GYSQGGSYEECKELFRVMLSSVEVKPNALTAVSVLQACAQSNDLTFGIEVHRFVNESQIK 242

Query: 182  VDVAVCNTIIGLYAKCGSLDYARELFDEMKERDGVSYGSMISGYMIHGFVDKAVELFSEM 361
            +DV++ N +IGLYAKCG LDYARELF+EM E+DG++Y SMISGYM+HGFV++A++LF E 
Sbjct: 243  MDVSLWNAVIGLYAKCGILDYARELFEEMPEKDGITYCSMISGYMVHGFVNQAMDLFREQ 302

Query: 362  KIPALSTWNAVLSGLIQNNHHESIPQLFREMQATGLRPNSVTLSSVLPTFSYYSNLKGGK 541
            + P L TWNAV+SGL+QNN  E    +FR MQ+ G RPN+VTL+S+LP FS++S LKGGK
Sbjct: 303  ERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGK 362

Query: 542  QIHCYAIRNNYDRNIYVATAMIDLYAKAGFLHGAHLVFTKCRAKSVVIWTAIISSCAAHG 721
            +IH YAIRN YDRNIYVATA+ID YAK G+LHGA LVF + + +S++ WT+IIS+ A HG
Sbjct: 363  EIHGYAIRNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHG 422

Query: 722  KAGAALTLFSEMLTCGVKPDPVTFTAVLAACAHAGVVDEASRILETMFPVYGIHPSMEHY 901
             A  AL+LF EMLT G++PD VTFT+VLAACAH+G +DEA +I   + P YGI P +EHY
Sbjct: 423  DANVALSLFYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHY 482

Query: 902  ACMVGVHSRAGKLYEAAKFISKMPIEPSAKVWGALLNGVSVSGDVELGKFVCDRLFEIEP 1081
            ACMVGV SRAGKL +A +FISKMP+EP+AKVWGALLNG SV+GDVELGK+V DRLFEIEP
Sbjct: 483  ACMVGVLSRAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEP 542

Query: 1082 ENSWNYIVMANLYSRAGRWEEAEKIREKMKNTGLKKIPGCSWIETSGGLLSFIAGDVSNA 1261
            EN+ NY++MANLYS++GRW++A+ IR+ MK   LKKIPG SWIETSGG+  F     S+ 
Sbjct: 543  ENTGNYVIMANLYSQSGRWKDADTIRDLMKEVRLKKIPGNSWIETSGGMQRFCXRH-SSV 601

Query: 1262 MMEEISFVLEVLAEMMREE 1318
               E+  +LE L  +++EE
Sbjct: 602  RTPEVYGMLEGLLGLVKEE 620



 Score =  105 bits (263), Expect = 3e-20
 Identities = 86/316 (27%), Positives = 141/316 (44%), Gaps = 4/316 (1%)
 Frame = +2

Query: 5   YAQGGFYEECLDLYRDMVAS--TGIKPNGVTMVSVLQACAH--SNDLLFGIQVHRFIIEN 172
           Y     + + L L+  +V S  T +KP+  T+   L+A A   SN  L   +VH FI+  
Sbjct: 79  YTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCSLKALASLFSNSGL-AKEVHSFILRR 137

Query: 173 SIEVDVAVCNTIIGLYAKCGSLDYARELFDEMKERDGVSYGSMISGYMIHGFVDKAVELF 352
            +E D+ V N +I  Y++C  L  AR +FD M ERD VS+ +M++GY   G  ++  ELF
Sbjct: 138 GLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDTVSWNAMLAGYSQGGSYEECKELF 197

Query: 353 SEMKIPALSTWNAVLSGLIQNNHHESIPQLFREMQATGLRPNSVTLSSVLPTFSYYSNLK 532
             M                              + +  ++PN++T  SVL   +  ++L 
Sbjct: 198 RVM------------------------------LSSVEVKPNALTAVSVLQACAQSNDLT 227

Query: 533 GGKQIHCYAIRNNYDRNIYVATAMIDLYAKAGFLHGAHLVFTKCRAKSVVIWTAIISSCA 712
            G ++H +   +    ++ +  A+I LYAK G L  A  +F +   K  + + ++IS   
Sbjct: 228 FGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGILDYARELFEEMPEKDGITYCSMISGYM 287

Query: 713 AHGKAGAALTLFSEMLTCGVKPDPVTFTAVLAACAHAGVVDEASRILETMFPVYGIHPSM 892
            HG    A+ LF E      +P   T+ AV++        + A  I   M   +G  P+ 
Sbjct: 288 VHGFVNQAMDLFREQ----ERPRLPTWNAVISGLVQNNRQEGAVDIFRAM-QSHGCRPNT 342

Query: 893 EHYACMVGVHSRAGKL 940
              A ++ V S    L
Sbjct: 343 VTLASILPVFSHFSTL 358



 Score = 85.5 bits (210), Expect = 4e-14
 Identities = 73/314 (23%), Positives = 143/314 (45%), Gaps = 8/314 (2%)
 Frame = +2

Query: 119  HSNDLLF---GIQVHRFIIENSIEVDVAVCNTIIGLYAKCGSLDYARELFDEMKERDGVS 289
            H  D LF   G Q+H  ++ +S+  D  + + +I  Y+K GS+  A  +F ++  ++  S
Sbjct: 12   HCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKNIFS 71

Query: 290  YGSMISGYMIHGFVDKAVELFSEMKIPALSTWNAVLSGLIQNNHHESIPQLFREMQATGL 469
            + ++   Y +H      ++LF               S L+ +N             +T +
Sbjct: 72   WNALFISYTLHNMHTDLLKLF---------------SSLVNSN-------------STDV 103

Query: 470  RPNSVTLSSVLPTF-SYYSNLKGGKQIHCYAIRNNYDRNIYVATAMIDLYAKAGFLHGAH 646
            +P+  T++  L    S +SN    K++H + +R   + +I+V  A+I  Y++   L  A 
Sbjct: 104  KPDRFTVTCSLKALASLFSNSGLAKEVHSFILRRGLEYDIFVVNALITFYSRCDELVLAR 163

Query: 647  LVFTKCRAKSVVIWTAIISSCAAHGKAGAALTLFSEML-TCGVKPDPVTFTAVLAACAHA 823
            ++F +   +  V W A+++  +  G       LF  ML +  VKP+ +T  +VL ACA +
Sbjct: 164  IMFDRMPERDTVSWNAMLAGYSQGGSYEECKELFRVMLSSVEVKPNALTAVSVLQACAQS 223

Query: 824  GVVD---EASRILETMFPVYGIHPSMEHYACMVGVHSRAGKLYEAAKFISKMPIEPSAKV 994
              +    E  R +        I   +  +  ++G++++ G L  A +   +MP E     
Sbjct: 224  NDLTFGIEVHRFVNES----QIKMDVSLWNAVIGLYAKCGILDYARELFEEMP-EKDGIT 278

Query: 995  WGALLNGVSVSGDV 1036
            + ++++G  V G V
Sbjct: 279  YCSMISGYMVHGFV 292



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 3/183 (1%)
 Frame = +2

Query: 536  GKQIHCYAIRNNYDRNIYVATAMIDLYAKAGFLHGAHLVFTKCRAKSVVIWTAIISSCAA 715
            GKQ+H   + ++   + ++ + +I  Y+K+G +  A+ VF K   K++  W A+  S   
Sbjct: 22   GKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALFISYTL 81

Query: 716  HGKAGAALTLFSEML---TCGVKPDPVTFTAVLAACAHAGVVDEASRILETMFPVYGIHP 886
            H      L LFS ++   +  VKPD  T T  L A A        ++ + +     G+  
Sbjct: 82   HNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCSLKALASLFSNSGLAKEVHSFILRRGLEY 141

Query: 887  SMEHYACMVGVHSRAGKLYEAAKFISKMPIEPSAKVWGALLNGVSVSGDVELGKFVCDRL 1066
             +     ++  +SR  +L  A     +MP E     W A+L G S  G  E     C  L
Sbjct: 142  DIFVVNALITFYSRCDELVLARIMFDRMP-ERDTVSWNAMLAGYSQGGSYE----ECKEL 196

Query: 1067 FEI 1075
            F +
Sbjct: 197  FRV 199


>ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37310-like
            [Cucumis sativus]
          Length = 595

 Score =  572 bits (1474), Expect = e-160
 Identities = 270/412 (65%), Positives = 341/412 (82%)
 Frame = +2

Query: 2    GYAQGGFYEECLDLYRDMVASTGIKPNGVTMVSVLQACAHSNDLLFGIQVHRFIIENSIE 181
            GY+QGG YE+C +L+R M++S  +KPN +T VSVLQACA SNDL+FGI+VHRF+ E+ I+
Sbjct: 183  GYSQGGSYEKCKELFRVMLSSLEVKPNALTAVSVLQACAQSNDLIFGIEVHRFVNESQIK 242

Query: 182  VDVAVCNTIIGLYAKCGSLDYARELFDEMKERDGVSYGSMISGYMIHGFVDKAVELFSEM 361
            +DV++ N +IGLYAKCGSLDYARELF+EM E+D ++Y SMISGYM+HGFV++A++LF E 
Sbjct: 243  MDVSLWNAVIGLYAKCGSLDYARELFEEMLEKDAITYCSMISGYMVHGFVNQAMDLFREQ 302

Query: 362  KIPALSTWNAVLSGLIQNNHHESIPQLFREMQATGLRPNSVTLSSVLPTFSYYSNLKGGK 541
            + P L TWNAV+SGL+QNN  E    +FR MQ+ G RPN+VTL+S+LP FS++S LKGGK
Sbjct: 303  ERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGK 362

Query: 542  QIHCYAIRNNYDRNIYVATAMIDLYAKAGFLHGAHLVFTKCRAKSVVIWTAIISSCAAHG 721
            +IH YAIRN YDRNIYVATA+ID YAK G+LHGA LVF + + +S++ WT+IIS+ A HG
Sbjct: 363  EIHGYAIRNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHG 422

Query: 722  KAGAALTLFSEMLTCGVKPDPVTFTAVLAACAHAGVVDEASRILETMFPVYGIHPSMEHY 901
             A  AL+LF EMLT G++PD VTFT+VLAACAH+G +DEA +I   + P YGI P +EHY
Sbjct: 423  DANVALSLFYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHY 482

Query: 902  ACMVGVHSRAGKLYEAAKFISKMPIEPSAKVWGALLNGVSVSGDVELGKFVCDRLFEIEP 1081
            ACMVGV SRAGKL +A +FISKMP+EP+AKVWGALLNG SV+GDVELGK+V DRLFEIEP
Sbjct: 483  ACMVGVLSRAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEP 542

Query: 1082 ENSWNYIVMANLYSRAGRWEEAEKIREKMKNTGLKKIPGCSWIETSGGLLSF 1237
            EN+ NY++MANLYS++GRW++A+ IR+ MK   LKKIPG SWIETSGG+  F
Sbjct: 543  ENTGNYVIMANLYSQSGRWKDADTIRDLMKEVRLKKIPGNSWIETSGGMQRF 594



 Score =  106 bits (265), Expect = 1e-20
 Identities = 87/316 (27%), Positives = 141/316 (44%), Gaps = 4/316 (1%)
 Frame = +2

Query: 5   YAQGGFYEECLDLYRDMVAS--TGIKPNGVTMVSVLQACAH--SNDLLFGIQVHRFIIEN 172
           Y     + + L L+  +V S  T +KP+  T+   L+A A   SN  L   +VH FI+  
Sbjct: 79  YTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCALKALASLFSNSGL-AKEVHSFILRR 137

Query: 173 SIEVDVAVCNTIIGLYAKCGSLDYARELFDEMKERDGVSYGSMISGYMIHGFVDKAVELF 352
            +E D+ V N +I  Y++C  L  AR +FD M ERD VS+ +M++GY   G  +K  ELF
Sbjct: 138 GLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDIVSWNAMLAGYSQGGSYEKCKELF 197

Query: 353 SEMKIPALSTWNAVLSGLIQNNHHESIPQLFREMQATGLRPNSVTLSSVLPTFSYYSNLK 532
             M                              + +  ++PN++T  SVL   +  ++L 
Sbjct: 198 RVM------------------------------LSSLEVKPNALTAVSVLQACAQSNDLI 227

Query: 533 GGKQIHCYAIRNNYDRNIYVATAMIDLYAKAGFLHGAHLVFTKCRAKSVVIWTAIISSCA 712
            G ++H +   +    ++ +  A+I LYAK G L  A  +F +   K  + + ++IS   
Sbjct: 228 FGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGSLDYARELFEEMLEKDAITYCSMISGYM 287

Query: 713 AHGKAGAALTLFSEMLTCGVKPDPVTFTAVLAACAHAGVVDEASRILETMFPVYGIHPSM 892
            HG    A+ LF E      +P   T+ AV++        + A  I   M   +G  P+ 
Sbjct: 288 VHGFVNQAMDLFREQ----ERPRLPTWNAVISGLVQNNRQEGAVDIFRAM-QSHGCRPNT 342

Query: 893 EHYACMVGVHSRAGKL 940
              A ++ V S    L
Sbjct: 343 VTLASILPVFSHFSTL 358



 Score = 88.2 bits (217), Expect = 6e-15
 Identities = 73/314 (23%), Positives = 146/314 (46%), Gaps = 8/314 (2%)
 Frame = +2

Query: 119  HSNDLLF---GIQVHRFIIENSIEVDVAVCNTIIGLYAKCGSLDYARELFDEMKERDGVS 289
            H  D LF   G Q+H  ++ +S+  D  + + +I  Y+K GS+  A  +F ++  ++  S
Sbjct: 12   HCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKNIFS 71

Query: 290  YGSMISGYMIHGFVDKAVELFSEMKIPALSTWNAVLSGLIQNNHHESIPQLFREMQATGL 469
            + +++  Y +H      ++LF               S L+ +N             +T +
Sbjct: 72   WNALLISYTLHNMHTDLLKLF---------------SSLVNSN-------------STDV 103

Query: 470  RPNSVTLSSVLPTF-SYYSNLKGGKQIHCYAIRNNYDRNIYVATAMIDLYAKAGFLHGAH 646
            +P+  T++  L    S +SN    K++H + +R   + +I+V  A+I  Y++   L  A 
Sbjct: 104  KPDRFTVTCALKALASLFSNSGLAKEVHSFILRRGLEYDIFVVNALITFYSRCDELVLAR 163

Query: 647  LVFTKCRAKSVVIWTAIISSCAAHGKAGAALTLFSEML-TCGVKPDPVTFTAVLAACAHA 823
            ++F +   + +V W A+++  +  G       LF  ML +  VKP+ +T  +VL ACA +
Sbjct: 164  IMFDRMPERDIVSWNAMLAGYSQGGSYEKCKELFRVMLSSLEVKPNALTAVSVLQACAQS 223

Query: 824  GVV---DEASRILETMFPVYGIHPSMEHYACMVGVHSRAGKLYEAAKFISKMPIEPSAKV 994
              +    E  R +        I   +  +  ++G++++ G L  A +   +M +E  A  
Sbjct: 224  NDLIFGIEVHRFVNES----QIKMDVSLWNAVIGLYAKCGSLDYARELFEEM-LEKDAIT 278

Query: 995  WGALLNGVSVSGDV 1036
            + ++++G  V G V
Sbjct: 279  YCSMISGYMVHGFV 292



 Score = 65.1 bits (157), Expect = 5e-08
 Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 3/183 (1%)
 Frame = +2

Query: 536  GKQIHCYAIRNNYDRNIYVATAMIDLYAKAGFLHGAHLVFTKCRAKSVVIWTAIISSCAA 715
            GKQ+H   + ++   + ++ + +I  Y+K+G +  A+ VF K   K++  W A++ S   
Sbjct: 22   GKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALLISYTL 81

Query: 716  HGKAGAALTLFSEML---TCGVKPDPVTFTAVLAACAHAGVVDEASRILETMFPVYGIHP 886
            H      L LFS ++   +  VKPD  T T  L A A        ++ + +     G+  
Sbjct: 82   HNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCALKALASLFSNSGLAKEVHSFILRRGLEY 141

Query: 887  SMEHYACMVGVHSRAGKLYEAAKFISKMPIEPSAKVWGALLNGVSVSGDVELGKFVCDRL 1066
             +     ++  +SR  +L  A     +MP E     W A+L G S  G  E     C  L
Sbjct: 142  DIFVVNALITFYSRCDELVLARIMFDRMP-ERDIVSWNAMLAGYSQGGSYE----KCKEL 196

Query: 1067 FEI 1075
            F +
Sbjct: 197  FRV 199


>ref|XP_002881503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297327342|gb|EFH57762.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 669

 Score =  547 bits (1409), Expect = e-153
 Identities = 264/440 (60%), Positives = 337/440 (76%)
 Frame = +2

Query: 2    GYAQGGFYEECLDLYRDMVASTGIKPNGVTMVSVLQACAHSNDLLFGIQVHRFIIENSIE 181
            GY+Q G +E+C  LY+ M+  +  KPN VT++SVLQAC  S+DL+FG++VH+ +IEN I+
Sbjct: 207  GYSQSGSFEDCKKLYKAMLGCSDFKPNEVTVISVLQACGQSSDLVFGMEVHKKMIENHIQ 266

Query: 182  VDVAVCNTIIGLYAKCGSLDYARELFDEMKERDGVSYGSMISGYMIHGFVDKAVELFSEM 361
            +D+++CN +IG YAKCGSLDYAR LFDEM E+D V+YG++ISGYM HG V +A+ LFSEM
Sbjct: 267  MDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEM 326

Query: 362  KIPALSTWNAVLSGLIQNNHHESIPQLFREMQATGLRPNSVTLSSVLPTFSYYSNLKGGK 541
            +   LSTWNAV+SGL+QNNHHE +   FREM   G RPN+VTLSS+LP+ +Y SNLKGGK
Sbjct: 327  ESIGLSTWNAVISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGK 386

Query: 542  QIHCYAIRNNYDRNIYVATAMIDLYAKAGFLHGAHLVFTKCRAKSVVIWTAIISSCAAHG 721
            +IH +AIRN  D NIYV T++ID YAK GFL GA  VF  C+ +S+++WTAII++ A HG
Sbjct: 387  EIHAFAIRNGSDNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIVWTAIITAYAVHG 446

Query: 722  KAGAALTLFSEMLTCGVKPDPVTFTAVLAACAHAGVVDEASRILETMFPVYGIHPSMEHY 901
             + +A +LF +M   G KPD VT TAVL+A AH+G  D+A  I ++M   Y I P +EHY
Sbjct: 447  DSDSACSLFDQMQCLGTKPDNVTLTAVLSAFAHSGDSDKAQHIFDSMLTKYNIEPGVEHY 506

Query: 902  ACMVGVHSRAGKLYEAAKFISKMPIEPSAKVWGALLNGVSVSGDVELGKFVCDRLFEIEP 1081
            ACMV V SRAGKL  A +FISKMPIEP AKVWGALLNG SV GDVE+ +F CDRLFE+EP
Sbjct: 507  ACMVSVLSRAGKLSNAMEFISKMPIEPIAKVWGALLNGASVLGDVEIARFACDRLFEMEP 566

Query: 1082 ENSWNYIVMANLYSRAGRWEEAEKIREKMKNTGLKKIPGCSWIETSGGLLSFIAGDVSNA 1261
            EN+ NY +MANLY++AGRWEEAE +R+KMK  GLKKIPG SWIET+ GL SFIA D S  
Sbjct: 567  ENTGNYTIMANLYTQAGRWEEAEVVRDKMKRIGLKKIPGTSWIETNKGLRSFIAKDSSCE 626

Query: 1262 MMEEISFVLEVLAEMMREED 1321
              +E+  ++E L E M +++
Sbjct: 627  RSKEMYDIIEGLVESMSDKE 646



 Score =  124 bits (312), Expect = 5e-26
 Identities = 116/475 (24%), Positives = 203/475 (42%), Gaps = 41/475 (8%)
 Frame = +2

Query: 5    YAQGGFYEECLDLYRDMVAST-----GIKPNGVTMVSVLQACAHSNDLLFGI---QVHRF 160
            Y     Y +   L+   + S+       +P+ +++  VL+A +  +D   G    QVH F
Sbjct: 98   YTSREMYFDAFSLFLSWIGSSCYSSGAARPDSISISCVLKALSGCDDFWLGSLARQVHGF 157

Query: 161  IIENSIEVDVAVCNTIIGLYAKCGSLDYARELFDEMKERDGVSYGSMISGYMIHGFVDKA 340
            +I    + DV V N +I  Y KC +++ AR++FDEM +RD VS+ SMISGY   G  +  
Sbjct: 158  VIRGGSDSDVFVGNGLITYYTKCDNIESARKVFDEMSDRDVVSWNSMISGYSQSGSFEDC 217

Query: 341  VELFSEMKIPALSTWNAVLSGLIQNNHHESIPQLFREMQATGLRPNSVTLSSVLPTFSYY 520
             +L+  M                              +  +  +PN VT+ SVL      
Sbjct: 218  KKLYKAM------------------------------LGCSDFKPNEVTVISVLQACGQS 247

Query: 521  SNLKGGKQIHCYAIRNNYDRNIYVATAMIDLYAKAGFLHGAHLVFTKCRAKSVVIWTAII 700
            S+L  G ++H   I N+   ++ +  A+I  YAK G L  A  +F +   K  V + AII
Sbjct: 248  SDLVFGMEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAII 307

Query: 701  SSCAAHGKAGAALTLFS-------------------------------EMLTCGVKPDPV 787
            S   AHG    A+ LFS                               EM+ CG +P+ V
Sbjct: 308  SGYMAHGLVKEAMALFSEMESIGLSTWNAVISGLMQNNHHEEVINSFREMIRCGSRPNTV 367

Query: 788  TFTAVLAACAHAGVVDEASRILETMFPVYGIHPSMEHYACMVGVHSRAGKLYEAAKFISK 967
            T +++L +  ++  + +  + +       G   ++     ++  +++ G L  A +    
Sbjct: 368  TLSSLLPSLTYSSNL-KGGKEIHAFAIRNGSDNNIYVTTSIIDNYAKLGFLLGAQRVFDN 426

Query: 968  MPIEPSAKVWGALLNGVSVSGDVELGKFVCDRL--FEIEPENSWNYIVMANLYSRAGRWE 1141
               + S  VW A++   +V GD +    + D++     +P+N      + + ++ +G  +
Sbjct: 427  CK-DRSLIVWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDNV-TLTAVLSAFAHSGDSD 484

Query: 1142 EAEKIREKMKNTGLKKIPGCSWIETSGGLLSFIAGDVSNAMMEEISFVLEVLAEM 1306
            +A+ I + M  T     PG         +LS  AG +SNAM       +E +A++
Sbjct: 485  KAQHIFDSML-TKYNIEPGVEHYACMVSVLS-RAGKLSNAMEFISKMPIEPIAKV 537