BLASTX nr result

ID: Cimicifuga21_contig00020392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020392
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278120.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   193   1e-47
ref|XP_004135555.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   183   1e-44
gb|ADV19264.1| hypothetical protein-like protein [Helleborus ori...   182   2e-44
ref|XP_003558139.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   179   3e-43
ref|NP_001236258.1| uncharacterized protein LOC100527451 [Glycin...   177   6e-43

>ref|XP_002278120.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 8-B isoform 2 [Vitis vinifera]
           gi|225432428|ref|XP_002278102.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
           8-B isoform 1 [Vitis vinifera]
           gi|297736935|emb|CBI26136.3| unnamed protein product
           [Vitis vinifera]
          Length = 106

 Score =  193 bits (490), Expect = 1e-47
 Identities = 88/106 (83%), Positives = 96/106 (90%)
 Frame = -1

Query: 504 MATTVDALGEPIPTSSVLMASSKHIGSRCREQNMAFLNCKKKDANPEKCLDKGHEVTRCV 325
           MA+TVDA G PIPTS+VLMASSKHIGSRC  +N+AFL CKK+D NPEKCLDKG EVTRCV
Sbjct: 1   MASTVDAGGHPIPTSAVLMASSKHIGSRCFSENVAFLKCKKQDPNPEKCLDKGREVTRCV 60

Query: 324 FSLLKDLHQNCTKQMDAYAGCMYYHTNEFDLCREEQQEFEKVCPLK 187
           F LLKDLHQ CTK+MDAYAGCMYYHTNEFDLCR+EQQEFEK CPL+
Sbjct: 61  FGLLKDLHQRCTKEMDAYAGCMYYHTNEFDLCRKEQQEFEKACPLE 106


>ref|XP_004135555.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 8-B-like [Cucumis sativus]
           gi|449488520|ref|XP_004158067.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
           8-B-like [Cucumis sativus]
          Length = 106

 Score =  183 bits (464), Expect = 1e-44
 Identities = 80/106 (75%), Positives = 94/106 (88%)
 Frame = -1

Query: 504 MATTVDALGEPIPTSSVLMASSKHIGSRCREQNMAFLNCKKKDANPEKCLDKGHEVTRCV 325
           MA+ VDA G+PIPTS+VLM+SSKHI  +CR +N+A+L CK+KD NPEKCLDKGH+VTRCV
Sbjct: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60

Query: 324 FSLLKDLHQNCTKQMDAYAGCMYYHTNEFDLCREEQQEFEKVCPLK 187
            SLLKDLHQ CTK+MDAY GCMYYHTNEFDLCR+EQ+ FEK CPL+
Sbjct: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 106


>gb|ADV19264.1| hypothetical protein-like protein [Helleborus orientalis]
          Length = 110

 Score =  182 bits (463), Expect = 2e-44
 Identities = 82/100 (82%), Positives = 91/100 (91%)
 Frame = -1

Query: 492 VDALGEPIPTSSVLMASSKHIGSRCREQNMAFLNCKKKDANPEKCLDKGHEVTRCVFSLL 313
           V+A+GEPIPTSSVLMASS+HI +RC+ +NMAFL CKKKD NPEKCLDKG EVTRCV  LL
Sbjct: 8   VNAVGEPIPTSSVLMASSRHISTRCKGENMAFLTCKKKDGNPEKCLDKGQEVTRCVLGLL 67

Query: 312 KDLHQNCTKQMDAYAGCMYYHTNEFDLCREEQQEFEKVCP 193
           K LHQ CTK+MDAYAGCMYY+TNEFDLCR+EQQEFEKVCP
Sbjct: 68  KSLHQTCTKEMDAYAGCMYYNTNEFDLCRKEQQEFEKVCP 107


>ref|XP_003558139.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 8-A-like isoform 1 [Brachypodium distachyon]
          Length = 110

 Score =  179 bits (453), Expect = 3e-43
 Identities = 80/107 (74%), Positives = 92/107 (85%)
 Frame = -1

Query: 510 SIMATTVDALGEPIPTSSVLMASSKHIGSRCREQNMAFLNCKKKDANPEKCLDKGHEVTR 331
           S  +T VDA GEPIPTSSVLMA+SKHI  RC+ +NMAFLNCKKKD NPEKCL+KG +VTR
Sbjct: 2   SASSTPVDASGEPIPTSSVLMAASKHIAVRCQPENMAFLNCKKKDPNPEKCLEKGRQVTR 61

Query: 330 CVFSLLKDLHQNCTKQMDAYAGCMYYHTNEFDLCREEQQEFEKVCPL 190
           CVF+LLKDLHQ C K+MDAYAGCMYY+TNEFD CR+EQ+ FE  CP+
Sbjct: 62  CVFNLLKDLHQKCPKEMDAYAGCMYYYTNEFDFCRKEQEAFEGACPI 108


>ref|NP_001236258.1| uncharacterized protein LOC100527451 [Glycine max]
           gi|255632386|gb|ACU16543.1| unknown [Glycine max]
          Length = 106

 Score =  177 bits (450), Expect = 6e-43
 Identities = 80/106 (75%), Positives = 88/106 (83%)
 Frame = -1

Query: 504 MATTVDALGEPIPTSSVLMASSKHIGSRCREQNMAFLNCKKKDANPEKCLDKGHEVTRCV 325
           MA+ VDA G PIPTS+VLMASSKHIG RC  +N+ FL CKKKD NPEKCLDKG +VTRCV
Sbjct: 1   MASAVDASGNPIPTSAVLMASSKHIGIRCHSENLEFLKCKKKDQNPEKCLDKGRDVTRCV 60

Query: 324 FSLLKDLHQNCTKQMDAYAGCMYYHTNEFDLCREEQQEFEKVCPLK 187
             LLKDLHQ CTK+MD Y GCMYYHTNEFDLCR+EQQ FEK C L+
Sbjct: 61  LGLLKDLHQKCTKEMDEYVGCMYYHTNEFDLCRKEQQAFEKKCSLE 106


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