BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020384
         (1078 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein lig...   365   e-101
emb|CBI27748.3| unnamed protein product [Vitis vinifera]              365   e-101
ref|XP_002516202.1| zinc finger protein, putative [Ricinus commu...   337   3e-90
ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|2...   330   4e-88
ref|XP_002877935.1| zinc finger family protein [Arabidopsis lyra...   286   2e-78

>ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B-like [Vitis
            vinifera]
          Length = 358

 Score =  365 bits (936), Expect(2) = e-101
 Identities = 171/300 (57%), Positives = 213/300 (71%), Gaps = 14/300 (4%)
 Frame = +2

Query: 161  LIEVVDLETD-------LRYNPIACRGLNKKDAISVEKYSEDKELHKAIMASLLETK--- 310
            ++E+VD+E +       L   PI+CRG  +  AISVE+YS DKEL+ +I ASLL+ +   
Sbjct: 10   VVEIVDMEEEDAEEQVSLFLTPISCRGGTRNTAISVEQYSADKELYLSIKASLLQPQTPL 69

Query: 311  ----RXXXXXXXXXXXXXXXXTPSSQFCKKPFRYPSVTEKGQSSNTPNTQDSTFVCEICV 478
                                 TP +   +KPF +PSVTE GQ SN+      TFVCEIC+
Sbjct: 70   IHLDNDDDDDDLQILGINPPTTPHAFSTRKPFTFPSVTETGQPSNSKPDPPPTFVCEICI 129

Query: 479  EPKSQNEAFGIKGCKHSYCAECMARYVASKIQENVTSIRCPETNCLGVLEPEFCRSILPQ 658
            +PK  N +F IKGC HSYC++CM +YVASK+Q+NV+ I CP  NC GVLEP+ CR ILP 
Sbjct: 130  DPKPLNHSFSIKGCPHSYCSDCMTKYVASKLQDNVSRISCPAPNCTGVLEPQQCRPILPS 189

Query: 659  EVFDRWGNALCESLILGAQKFYCPFKDCSALLIDDGGVVVTESECPHCRRMFCAQCKVPW 838
             VFDRWGNALCE+LILG+QKFYCP+KDCSALLI D G V+ ESECP+CRR+FCAQC+VPW
Sbjct: 190  HVFDRWGNALCEALILGSQKFYCPYKDCSALLIRDEGEVIKESECPNCRRLFCAQCEVPW 249

Query: 839  HMGITCQEFQKLSKGEREREDIMLMKLAKDKKWQRCPKCKFYVERSEGCLFMKCRCGHMF 1018
            H GI C EFQKL+K ER REDI++M LAK   W+RCPKCKFYVE+S GC++++CRCG  F
Sbjct: 250  HSGIDCGEFQKLNKDERGREDILMMNLAKTNNWKRCPKCKFYVEKSFGCMYIRCRCGFAF 309



 Score = 30.8 bits (68), Expect(2) = e-101
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +3

Query: 1017 FCYNCAAPMDDNSHNCGKCT 1076
            FCYNC AP    SH C  C+
Sbjct: 309  FCYNCGAPSSTISHICPHCS 328


>emb|CBI27748.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  365 bits (936), Expect(2) = e-101
 Identities = 171/300 (57%), Positives = 213/300 (71%), Gaps = 14/300 (4%)
 Frame = +2

Query: 161  LIEVVDLETD-------LRYNPIACRGLNKKDAISVEKYSEDKELHKAIMASLLETK--- 310
            ++E+VD+E +       L   PI+CRG  +  AISVE+YS DKEL+ +I ASLL+ +   
Sbjct: 10   VVEIVDMEEEDAEEQVSLFLTPISCRGGTRNTAISVEQYSADKELYLSIKASLLQPQTPL 69

Query: 311  ----RXXXXXXXXXXXXXXXXTPSSQFCKKPFRYPSVTEKGQSSNTPNTQDSTFVCEICV 478
                                 TP +   +KPF +PSVTE GQ SN+      TFVCEIC+
Sbjct: 70   IHLDNDDDDDDLQILGINPPTTPHAFSTRKPFTFPSVTETGQPSNSKPDPPPTFVCEICI 129

Query: 479  EPKSQNEAFGIKGCKHSYCAECMARYVASKIQENVTSIRCPETNCLGVLEPEFCRSILPQ 658
            +PK  N +F IKGC HSYC++CM +YVASK+Q+NV+ I CP  NC GVLEP+ CR ILP 
Sbjct: 130  DPKPLNHSFSIKGCPHSYCSDCMTKYVASKLQDNVSRISCPAPNCTGVLEPQQCRPILPS 189

Query: 659  EVFDRWGNALCESLILGAQKFYCPFKDCSALLIDDGGVVVTESECPHCRRMFCAQCKVPW 838
             VFDRWGNALCE+LILG+QKFYCP+KDCSALLI D G V+ ESECP+CRR+FCAQC+VPW
Sbjct: 190  HVFDRWGNALCEALILGSQKFYCPYKDCSALLIRDEGEVIKESECPNCRRLFCAQCEVPW 249

Query: 839  HMGITCQEFQKLSKGEREREDIMLMKLAKDKKWQRCPKCKFYVERSEGCLFMKCRCGHMF 1018
            H GI C EFQKL+K ER REDI++M LAK   W+RCPKCKFYVE+S GC++++CRCG  F
Sbjct: 250  HSGIDCGEFQKLNKDERGREDILMMNLAKTNNWKRCPKCKFYVEKSFGCMYIRCRCGFAF 309



 Score = 30.4 bits (67), Expect(2) = e-101
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +3

Query: 1017 FCYNCAAPMDDNSHNCGKC 1073
            FCYNC AP    SH C  C
Sbjct: 309  FCYNCGAPSSTISHICPHC 327


>ref|XP_002516202.1| zinc finger protein, putative [Ricinus communis]
            gi|223544688|gb|EEF46204.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 400

 Score =  337 bits (864), Expect = 3e-90
 Identities = 173/322 (53%), Positives = 214/322 (66%), Gaps = 22/322 (6%)
 Frame = +2

Query: 104  ENQISKKRERDMGDGGEVCLIEVVDLETDLRYNPIACRGLNKKDAISVEKYSEDKELHKA 283
            E  IS+K+++          +E+ DL+    Y PI+ +G      ISVE YSE+++L+ A
Sbjct: 68   EKPISRKKQKVEKSAEMTETVELDDLD-GFFYTPISKKGNKNTTEISVESYSEERDLNVA 126

Query: 284  IMASLLET------------------KRXXXXXXXXXXXXXXXXTPSSQFCKKPF---RY 400
            I+ASL  T                  +                 TP     KK     R+
Sbjct: 127  ILASLQSTSASNNNKQLNFNDLSQDYRNYCYIDDENDDLRVLDFTPLPATSKKEMGKNRF 186

Query: 401  P-SVTEKGQSSNTPNTQDSTFVCEICVEPKSQNEAFGIKGCKHSYCAECMARYVASKIQE 577
              SVTEKG SS  PN     FVCEICVE K+ +E+  I+GC H+YC +CMA+YVASKIQE
Sbjct: 187  GFSVTEKGHSSE-PNDHPQ-FVCEICVESKTADESLAIRGCTHAYCTDCMAKYVASKIQE 244

Query: 578  NVTSIRCPETNCLGVLEPEFCRSILPQEVFDRWGNALCESLILGAQKFYCPFKDCSALLI 757
            N+T I CP + C G+LEPE+CRSILPQEVFDRWGNALCE+L LG+QKFYCPFKDCSA+LI
Sbjct: 245  NITGIYCPVSGCGGLLEPEYCRSILPQEVFDRWGNALCEALNLGSQKFYCPFKDCSAMLI 304

Query: 758  DDGGVVVTESECPHCRRMFCAQCKVPWHMGITCQEFQKLSKGEREREDIMLMKLAKDKKW 937
            +DGG V+ ESECPHCRR+FCA CKVPWH GI C +FQ L K ERE+EDIMLMKLA++KKW
Sbjct: 305  NDGGEVIRESECPHCRRLFCAHCKVPWHSGIDCNKFQTLHKDEREKEDIMLMKLAENKKW 364

Query: 938  QRCPKCKFYVERSEGCLFMKCR 1003
            +RCP C+ YVER+EGC +MKCR
Sbjct: 365  RRCPICRIYVERTEGCRYMKCR 386


>ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|222866152|gb|EEF03283.1|
            predicted protein [Populus trichocarpa]
          Length = 307

 Score =  330 bits (846), Expect = 4e-88
 Identities = 158/285 (55%), Positives = 197/285 (69%), Gaps = 13/285 (4%)
 Frame = +2

Query: 203  PIACRGLNKKDAISVEKYSEDKELHKAIMASLLETKRXXXXXXXXXXXXXXXXTPS---- 370
            P++ +G  + +AISVE+Y ED++L+ AIMASL   K                        
Sbjct: 2    PVSNKGTGENNAISVEEYGEDRDLNIAIMASLKSNKEANFIDPSQDYFYYYNDEDDDIKV 61

Query: 371  ---------SQFCKKPFRYPSVTEKGQSSNTPNTQDSTFVCEICVEPKSQNEAFGIKGCK 523
                     S+  K+P    SV EKGQSSN+    D  FVC+ICVEP     +F IKGC 
Sbjct: 62   LDFLPEVIPSRKQKEPTFIESVAEKGQSSNSQIDPD--FVCQICVEPTILKNSFLIKGCT 119

Query: 524  HSYCAECMARYVASKIQENVTSIRCPETNCLGVLEPEFCRSILPQEVFDRWGNALCESLI 703
            H+YC ECM +YV+SK+QEN+T I CP  +C G LEPE CRS+LP+ VFDRWGNALCE++I
Sbjct: 120  HAYCTECMVKYVSSKLQENITKICCPVPDCKGALEPEDCRSVLPENVFDRWGNALCEAVI 179

Query: 704  LGAQKFYCPFKDCSALLIDDGGVVVTESECPHCRRMFCAQCKVPWHMGITCQEFQKLSKG 883
            LG+QKFYCPFKDCSA+LIDDG  VV ESECP+C RMFCAQCKVPWH  I+C+E++ L K 
Sbjct: 180  LGSQKFYCPFKDCSAMLIDDGEEVVRESECPNCWRMFCAQCKVPWHSQISCEEYKMLHKD 239

Query: 884  EREREDIMLMKLAKDKKWQRCPKCKFYVERSEGCLFMKCRCGHMF 1018
            ERER+DI+LM LAK+K W+RCPKC+ +VE+ EGC +MKCRCG  F
Sbjct: 240  ERERDDILLMNLAKNKNWRRCPKCRIFVEKIEGCRYMKCRCGTQF 284


>ref|XP_002877935.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297323773|gb|EFH54194.1| zinc finger family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 322

 Score =  286 bits (733), Expect(2) = 2e-78
 Identities = 132/273 (48%), Positives = 178/273 (65%), Gaps = 1/273 (0%)
 Frame = +2

Query: 203  PIACRGLNKKDAISVEKYSEDKELHKA-IMASLLETKRXXXXXXXXXXXXXXXXTPSSQF 379
            P++ RG  K+DAISVE Y  D++L +  +        +                      
Sbjct: 33   PLSARGSTKRDAISVENYDRDRKLQRLWVYPPHNRAIKSESPIYIDLDLYNDEDDDIRIL 92

Query: 380  CKKPFRYPSVTEKGQSSNTPNTQDSTFVCEICVEPKSQNEAFGIKGCKHSYCAECMARYV 559
            C  P  +    EKGQSS++      TF CEICVE KS  E F I GC H YC +C+++Y+
Sbjct: 93   CFPPPIHTKSLEKGQSSSSATV---TFDCEICVETKSIIETFRIGGCSHFYCNDCVSKYI 149

Query: 560  ASKIQENVTSIRCPETNCLGVLEPEFCRSILPQEVFDRWGNALCESLILGAQKFYCPFKD 739
            A+K+Q+N+ SI CP + C G LEP+ CR ILP+EVFDRWG+ALCE++++ +++FYCP+KD
Sbjct: 150  AAKLQDNILSIECPVSGCSGRLEPDQCRQILPREVFDRWGDALCEAVVMRSKRFYCPYKD 209

Query: 740  CSALLIDDGGVVVTESECPHCRRMFCAQCKVPWHMGITCQEFQKLSKGEREREDIMLMKL 919
            CSALL  D   V+ +SECPHC RM C +C   WH  +TC+EFQKL++ ER R+DI+L  +
Sbjct: 210  CSALLFMDESEVMKDSECPHCHRMVCVECGTKWHPEMTCEEFQKLAENERGRDDILLATM 269

Query: 920  AKDKKWQRCPKCKFYVERSEGCLFMKCRCGHMF 1018
            AK KKW+RCP CKFY+E+S GCL+MKCRCG  F
Sbjct: 270  AKKKKWKRCPSCKFYIEKSHGCLYMKCRCGLAF 302



 Score = 33.5 bits (75), Expect(2) = 2e-78
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 1011 ICFCYNCAAPMDDNSHNCGKC 1073
            + FCYNC  P  D+SH C  C
Sbjct: 300  LAFCYNCGTPSRDHSHYCYNC 320